ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190072.1| Oryza sativa (japonica cultivar-group), predic... 88 2e-14
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
3dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
4dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 2e-14
5ref|NM_190071.1| Oryza sativa (japonica cultivar-group), predic... 72 1e-09
6emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase in... 72 1e-09
7emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibi... 64 2e-07
8emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylan... 64 2e-07
9emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for x... 64 2e-07
10dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inh... 64 2e-07
11dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inh... 64 2e-07
12dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhib... 64 2e-07
13emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase... 64 2e-07
14emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylana... 56 6e-05
15emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylana... 56 6e-05
16gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full ... 56 6e-05
17emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xy... 56 6e-05
18dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhi... 56 6e-05
19gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds 50 0.004
20ref|NM_190067.1| Oryza sativa (japonica cultivar-group), predic... 48 0.014
21dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.014
22dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.056
23dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.056
24gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 44 0.22
25gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 42 0.88
26gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 40 3.5
27ref|XM_470328.1| Oryza sativa (japonica cultivar-group), mRNA 40 3.5
28gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
29gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome... 40 3.5
30gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 3.5
31gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genom... 40 3.5
32gb|CP000243.1| Escherichia coli UTI89, complete genome 40 3.5
33emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chr... 40 3.5
34emb|X79242.5|PDSOX Paracoccus denitrificans ORF1, ORF2, and shxV... 40 3.5
35emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete ... 40 3.5
36gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 3.5
37gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome 40 3.5
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
39dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
40dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
41gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome... 40 3.5
42dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.5
43dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
44dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 3.5
45gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosom... 40 3.5
46gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 3.5
47gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome 40 3.5
48dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome 40 3.5 
>ref|NM_190072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1260

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 18   agaagggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgt 77
            |||| ||||||||  |||||||||||||||||||  ||  |||||||| |||||   |||
Sbjct: 1219 agaacggcagcctcgcgaacccgagccgcttcttctccgagtcgaactgcagcaacatgt 1160

                                                
Query: 78   tctccatctggaaccctccgatgagcaccgccggcg 113
            ||||||||||||||||||||| || |||||||||||
Sbjct: 1159 tctccatctggaaccctccgaggatcaccgccggcg 1124



 Score = 46.1 bits (23), Expect = 0.056
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 213  agttcttgccgccgccgagcgtcagcgtcacgcccggcaccaggtagccgatccg 267
            ||||||| |||||| ||||| ||||| ||||  ||||||| | ||||||||||||
Sbjct: 1030 agttcttcccgccggcgagcatcagcctcaccgccggcacaaagtagccgatccg 976
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                            
Query: 18       agaagggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgt 77
                |||| ||||||||  |||||||||||||||||||  ||  |||||||| |||||   |||
Sbjct: 41134545 agaacggcagcctcgcgaacccgagccgcttcttctccgagtcgaactgcagcaacatgt 41134604

                                                    
Query: 78       tctccatctggaaccctccgatgagcaccgccggcg 113
                ||||||||||||||||||||| || |||||||||||
Sbjct: 41134605 tctccatctggaaccctccgaggatcaccgccggcg 41134640



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                        
Query: 58       gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcg 113
                ||||||| ||| |||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 41131801 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 41131856



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                            
Query: 58       gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcgcggc 117
                ||||||| ||| |||| ||| |||||||||   ||| ||||||| |||||||||||||||
Sbjct: 41118987 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcgcggc 41119046



 Score = 46.1 bits (23), Expect = 0.056
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                       
Query: 213      agttcttgccgccgccgagcgtcagcgtcacgcccggcaccaggtagccgatccg 267
                ||||||| |||||| ||||| ||||| ||||  ||||||| | ||||||||||||
Sbjct: 41134734 agttcttcccgccggcgagcatcagcctcaccgccggcacaaagtagccgatccg 41134788
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>dbj|AP003269.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0504E02
          Length = 137468

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Plus

                                                                         
Query: 18    agaagggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgt 77
             |||| ||||||||  |||||||||||||||||||  ||  |||||||| |||||   |||
Sbjct: 31600 agaacggcagcctcgcgaacccgagccgcttcttctccgagtcgaactgcagcaacatgt 31659

                                                 
Query: 78    tctccatctggaaccctccgatgagcaccgccggcg 113
             ||||||||||||||||||||| || |||||||||||
Sbjct: 31660 tctccatctggaaccctccgaggatcaccgccggcg 31695



 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                     
Query: 58    gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcg 113
             ||||||| ||| |||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 28856 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 28911



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 51/60 (85%)
 Strand = Plus / Plus

                                                                         
Query: 58    gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcgcggc 117
             ||||||| ||| |||| ||| |||||||||   ||| ||||||| |||||||||||||||
Sbjct: 16042 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcgcggc 16101



 Score = 46.1 bits (23), Expect = 0.056
 Identities = 47/55 (85%)
 Strand = Plus / Plus

                                                                    
Query: 213   agttcttgccgccgccgagcgtcagcgtcacgcccggcaccaggtagccgatccg 267
             ||||||| |||||| ||||| ||||| ||||  ||||||| | ||||||||||||
Sbjct: 31789 agttcttcccgccggcgagcatcagcctcaccgccggcacaaagtagccgatccg 31843
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>dbj|AK105806.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-B07, full
            insert sequence
          Length = 1404

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 83/96 (86%)
 Strand = Plus / Minus

                                                                        
Query: 18   agaagggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgt 77
            |||| ||||||||  |||||||||||||||||||  ||  |||||||| |||||   |||
Sbjct: 1231 agaacggcagcctcgcgaacccgagccgcttcttctccgagtcgaactgcagcaacatgt 1172

                                                
Query: 78   tctccatctggaaccctccgatgagcaccgccggcg 113
            ||||||||||||||||||||| || |||||||||||
Sbjct: 1171 tctccatctggaaccctccgaggatcaccgccggcg 1136



 Score = 46.1 bits (23), Expect = 0.056
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 213  agttcttgccgccgccgagcgtcagcgtcacgcccggcaccaggtagccgatccg 267
            ||||||| |||||| ||||| ||||| ||||  ||||||| | ||||||||||||
Sbjct: 1042 agttcttcccgccggcgagcatcagcctcaccgccggcacaaagtagccgatccg 988
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>ref|NM_190071.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1275

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                    
Query: 58   gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcg 113
            ||||||| ||| |||| ||||||||||||||||||||||||||| | |||||||||
Sbjct: 1188 gtcgaacaccaccaggttgttctccatctggaaccctccgatgatcgccgccggcg 1133
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>emb|AJ581529.1|HVU581529 Hordeum vulgare xi gene for xylanase inhibitor
          Length = 1255

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 23   ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
            ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 1193 ggcagcctgataaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 1134

                                            
Query: 83   atctggaaccctccgatgagcaccgccggcgc 114
            ||||||  |||||||| || ||||||||||||
Sbjct: 1133 atctgggcccctccgaggatcaccgccggcgc 1102



 Score = 48.1 bits (24), Expect = 0.014
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                    
Query: 150  cgaacgccaggcacgccgtcccgggcttgatgtccaccat 189
            ||||||| | |||||||||||| ||||||| |||||||||
Sbjct: 1075 cgaacgcaacgcacgccgtccccggcttgacgtccaccat 1036
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>emb|AJ697851.1| Triticum aestivum xi-IB gene for xylanase inhibitor precursor, exon 1
          Length = 1206

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 23   ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
            ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 1181 ggcagcctgagaaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 1122

                                            
Query: 83   atctggaaccctccgatgagcaccgccggcgc 114
            ||||||   ||||||| || ||||||||||||
Sbjct: 1121 atctgggctcctccgaggatcaccgccggcgc 1090
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>emb|AJ581532.1|SCE581532 Secale cereale xi-II/III gene for xylanase inhibitor
          Length = 1245

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 35   aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
            |||||||||||||||||  |||||||||| || |||| |  || ||||||||||  ||||
Sbjct: 1159 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcccct 1100

                                
Query: 95   ccgatgagcaccgccggcgc 114
            |||| || ||||||||||||
Sbjct: 1099 ccgaggatcaccgccggcgc 1080
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>emb|AJ581531.1|SCE581531 Secale cereale partial xi-IV gene for xylanase inhibitor
          Length = 737

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                       
Query: 35  aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
           |||||||||||||||||  |||||||||| || |||| |  || ||||||||||  ||||
Sbjct: 551 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcccct 492

                               
Query: 95  ccgatgagcaccgccggcgc 114
           |||| || ||||||||||||
Sbjct: 491 ccgaggatcaccgccggcgc 472



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 35/40 (87%)
 Strand = Plus / Minus

                                                   
Query: 150 cgaacgccaggcacgccgtcccgggcttgatgtccaccat 189
           ||||||| | |||||||||||| ||| ||| |||||||||
Sbjct: 436 cgaacgcaacgcacgccgtccccggcctgacgtccaccat 397
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>dbj|AB178471.1| Triticum aestivum Taxi-III gene for xylanase inhibitor, complete cds,
            upstream region
          Length = 2322

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 23   ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
            ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 2257 ggcagcctgagaaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 2198

                                            
Query: 83   atctggaaccctccgatgagcaccgccggcgc 114
            ||||||   ||||||| || ||||||||||||
Sbjct: 2197 atctgggctcctccgaggatcaccgccggcgc 2166
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>dbj|AB114627.1| Triticum aestivum Taxi-III mRNA for xylanase inhibitor TAXI-III,
            complete cds
          Length = 1411

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 77/92 (83%)
 Strand = Plus / Minus

                                                                        
Query: 23   ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
            ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 1260 ggcagcctgagaaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 1201

                                            
Query: 83   atctggaaccctccgatgagcaccgccggcgc 114
            ||||||   ||||||| || ||||||||||||
Sbjct: 1200 atctgggctcctccgaggatcaccgccggcgc 1169
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>dbj|AB114626.1| Triticum aestivum taxi-I mRNA for xylanase inhibitor TAXI-I, complete
            cds
          Length = 1374

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 35   aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
            |||||||||||||||||  |||||||||| || |||| |  || ||||||||||  ||||
Sbjct: 1227 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcccct 1168

                                
Query: 95   ccgatgagcaccgccggcgc 114
            |||| || ||||||||||||
Sbjct: 1167 ccgaggatcaccgccggcgc 1148



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 150  cgaacgccaggcacgccgtcccgggcttgatgtccaccattgagctcagcccgttcatgg 209
            ||||||| | ||||||||||||  |||||| ||||||||| ||| ||  |||| |||| |
Sbjct: 1112 cgaacgcaacgcacgccgtcccttgcttgacgtccaccatcgagttcttcccggtcatcg 1053

                  
Query: 210  tccagt 215
            ||||||
Sbjct: 1052 tccagt 1047
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>emb|AJ438880.1|TAE438880 Triticum aestivum xiI gene for xylanase inhibitor
          Length = 1298

 Score = 63.9 bits (32), Expect = 2e-07
 Identities = 68/80 (85%)
 Strand = Plus / Minus

                                                                        
Query: 35   aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
            |||||||||||||||||  |||||||||| || |||| |  || ||||||||||  ||||
Sbjct: 1219 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggcccct 1160

                                
Query: 95   ccgatgagcaccgccggcgc 114
            |||| || ||||||||||||
Sbjct: 1159 ccgaggatcaccgccggcgc 1140



 Score = 44.1 bits (22), Expect = 0.22
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                        
Query: 150  cgaacgccaggcacgccgtcccgggcttgatgtccaccattgagctcagcccgttcatgg 209
            ||||||| | ||||||||||||  |||||| ||||||||| ||| ||  |||| |||| |
Sbjct: 1104 cgaacgcaacgcacgccgtcccttgcttgacgtccaccatcgagttcttcccggtcatcg 1045

                  
Query: 210  tccagt 215
            ||||||
Sbjct: 1044 tccagt 1039
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>emb|AJ697850.1| Triticum aestivum partial xi-IIB gene for xylanase inhibitor
            precursor, exon 1
          Length = 1170

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 35   aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
            |||||||||||||||||  |||||||||| || |||| |  || ||||||||||   |||
Sbjct: 1112 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggctcct 1053

                                
Query: 95   ccgatgagcaccgccggcgc 114
            |||| || ||||||||||||
Sbjct: 1052 ccgaggatcaccgccggcgc 1033
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>emb|AJ697849.1| Triticum aestivum partial xi-IIA gene for xylanase inhibitor
            precursor, exon 1
          Length = 1170

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 23   ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
            ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 1124 ggcagcctgagaaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 1065

                                            
Query: 83   atctggaaccctccgatgagcaccgccggcgc 114
            ||||||   ||||| | || ||||||||||||
Sbjct: 1064 atctgggctcctcccaggatcaccgccggcgc 1033



 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 150 cgaacgccaggcacgccgtcccgggcttgatgtccaccattgag 193
           ||||||| | |||||||||||| ||||||| |||||||||||||
Sbjct: 997 cgaacgcaacgcacgccgtccccggcttgacgtccaccattgag 954
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>gb|BT009260.1| Triticum aestivum clone wlk4.pk0017.d2:fis, full insert mRNA
           sequence
          Length = 1343

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 40/44 (90%)
 Strand = Plus / Plus

                                                       
Query: 150 cgaacgccaggcacgccgtcccgggcttgatgtccaccattgag 193
           ||||||| | |||||||||||| ||||||| |||||||||||||
Sbjct: 291 cgaacgcaacgcacgccgtccccggcttgacgtccaccattgag 334



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                       
Query: 23  ggcagcctgacgaacccgagccgcttcttggccatgtcgaactccagcagggtgttctcc 82
           ||||||||||  |||||||||||||||||  |||||||||| || |||| |  || ||||
Sbjct: 164 ggcagcctgagaaacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctcc 223

                 
Query: 83  atctgg 88
           ||||||
Sbjct: 224 atctgg 229
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>emb|AJ581530.1|SCE581530 Secale cereale partial xi-I gene for xylanase inhibitor
          Length = 578

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                       
Query: 35  aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
           |||||||||||||||||  |||||||||| || |||| |  || |||||||||   ||||
Sbjct: 551 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgtgcccct 492

                               
Query: 95  ccgatgagcaccgccggcgc 114
           |||| || ||||||||||||
Sbjct: 491 ccgaggatcaccgccggcgc 472
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>dbj|AB114628.1| Triticum aestivum Taxi-IV mRNA for xylanase inhibitor TAXI-IV,
            complete cds
          Length = 1387

 Score = 56.0 bits (28), Expect = 6e-05
 Identities = 67/80 (83%)
 Strand = Plus / Minus

                                                                        
Query: 35   aacccgagccgcttcttggccatgtcgaactccagcagggtgttctccatctggaaccct 94
            |||||||||||||||||  |||||||||| || |||| |  || ||||||||||   |||
Sbjct: 1220 aacccgagccgcttcttctccatgtcgaagtcgagcacgaagtcctccatctgggctcct 1161

                                
Query: 95   ccgatgagcaccgccggcgc 114
            |||| || ||||||||||||
Sbjct: 1160 ccgaggatcaccgccggcgc 1141
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>gb|DQ219479.1| wheat putative xylanase inhibitor mRNA, partial cds
          Length = 347

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 75  tgttctccatctggaaccctccgat 99
           |||||||||||||||||||||||||
Sbjct: 201 tgttctccatctggaaccctccgat 177
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>ref|NM_190067.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1305

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 58   gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcgcggc 117
            ||||||| ||| |||| ||| |||||||||   ||| ||||||| |||||||||||||||
Sbjct: 1197 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcgcggc 1138
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>dbj|AK073591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051M04, full
            insert sequence
          Length = 1520

 Score = 48.1 bits (24), Expect = 0.014
 Identities = 51/60 (85%)
 Strand = Plus / Minus

                                                                        
Query: 58   gtcgaactccagcagggtgttctccatctggaaccctccgatgagcaccgccggcgcggc 117
            ||||||| ||| |||| ||| |||||||||   ||| ||||||| |||||||||||||||
Sbjct: 1211 gtcgaacaccaccaggttgtcctccatctgatgcccgccgatgatcaccgccggcgcggc 1152
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>dbj|AK111477.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-185-A02, full
           insert sequence
          Length = 1075

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 75  tgttctccatctggaaccctccgatga 101
           |||||||||||||||| ||||||||||
Sbjct: 184 tgttctccatctggaaacctccgatga 210
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>dbj|AK063356.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C06, full
            insert sequence
          Length = 1372

 Score = 46.1 bits (23), Expect = 0.056
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 75   tgttctccatctggaaccctccgatga 101
            |||||||||||||||| ||||||||||
Sbjct: 1218 tgttctccatctggaaacctccgatga 1192
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 44.1 bits (22), Expect = 0.22
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 222     cgccgccgagcgtcagcgtcac 243
               ||||||||||||||||||||||
Sbjct: 3042156 cgccgccgagcgtcagcgtcac 3042177



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 95      ccgatgagcaccgccggcgcggcg 118
               ||||| ||||||||||||||||||
Sbjct: 1808247 ccgatcagcaccgccggcgcggcg 1808224
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>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 42.1 bits (21), Expect = 0.88
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 222     cgccgccgagcgtcagcgtca 242
               |||||||||||||||||||||
Sbjct: 3011248 cgccgccgagcgtcagcgtca 3011268
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    gccgccgagcgtcagcgtcacgcc 246
              |||| |||||||||||||||||||
Sbjct: 675500 gccgtcgagcgtcagcgtcacgcc 675523
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>ref|XM_470328.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 950

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 102 gcaccgccggcgcggcgagg 121
           ||||||||||||||||||||
Sbjct: 177 gcaccgccggcgcggcgagg 196
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>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
            OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  gcgcgaacgccaggcacgcc 166
            ||||||||||||||||||||
Sbjct: 8538 gcgcgaacgccaggcacgcc 8519
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>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0006J12, complete sequence
          Length = 157069

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 58    gtcgaactccagcagggtgttctccatc 85
             |||||||||||||||| ||| |||||||
Sbjct: 96583 gtcgaactccagcaggttgtcctccatc 96556
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      gcaccgccggcgcggcgagg 121
                ||||||||||||||||||||
Sbjct: 34787560 gcaccgccggcgcggcgagg 34787541
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>gb|AC092557.7| Oryza sativa chromosome 3 BAC OSJNBa0096I06 genomic sequence, complete
             sequence
          Length = 164352

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   gcaccgccggcgcggcgagg 121
             ||||||||||||||||||||
Sbjct: 75090 gcaccgccggcgcggcgagg 75109
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     tcagcgtcacgcccggcacc 253
               ||||||||||||||||||||
Sbjct: 3577298 tcagcgtcacgcccggcacc 3577279
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>emb|AL356753.16| Human DNA sequence from clone RP11-481G8 on chromosome 10 Contains the
              5'end of a novel gene containing FLJ40930, gene FLJ35875,
              the RAI17 gene for retinoic acid induced 17, a novel gene
              and two CpG islands, complete sequence
          Length = 183460

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 10     ctgggtgaagaagggcagcc 29
              ||||||||||||||||||||
Sbjct: 177572 ctgggtgaagaagggcagcc 177591
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>emb|X79242.5|PDSOX Paracoccus denitrificans ORF1, ORF2, and shxV, shxW, soxX, soxY,
            soxZ, soxA, soxB, soxC, soxD, soxE, soxF, soxG and soxH
            genes
          Length = 13155

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  tggtccagttcttgccgccg 226
            ||||||||||||||||||||
Sbjct: 7739 tggtccagttcttgccgccg 7720
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>emb|AL939113.1|SCO939113 Streptomyces coelicolor A3(2) complete genome; segment 10/29
          Length = 310550

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 108   ccggcgcggcgaggtcccga 127
             ||||||||||||||||||||
Sbjct: 35045 ccggcgcggcgaggtcccga 35026
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>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 220     gccgccgccgagcgtcagcg 239
               ||||||||||||||||||||
Sbjct: 2401511 gccgccgccgagcgtcagcg 2401492
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>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 246     ccggcaccaggtagccgatc 265
               ||||||||||||||||||||
Sbjct: 3985665 ccggcaccaggtagccgatc 3985684
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 147      gcgcgaacgccaggcacgcc 166
                ||||||||||||||||||||
Sbjct: 18480532 gcgcgaacgccaggcacgcc 18480513



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 147      gcgcgaacgccaggcacgcc 166
                ||||||||||||||||||||
Sbjct: 18469073 gcgcgaacgccaggcacgcc 18469054
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 58       gtcgaactccagcagggtgttctccatc 85
                |||||||||||||||| ||| |||||||
Sbjct: 19495871 gtcgaactccagcaggttgtcctccatc 19495844
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 102      gcaccgccggcgcggcgagg 121
                ||||||||||||||||||||
Sbjct: 34877632 gcaccgccggcgcggcgagg 34877613
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>gb|AC138624.4| Mus musculus BAC clone RP23-187N1 from chromosome 7, complete sequence
          Length = 226264

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 64     ctccagcagggtgttctccatctggaac 91
              |||||| ||||| |||||||||||||||
Sbjct: 135558 ctccaggagggtcttctccatctggaac 135531
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>dbj|AP005392.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0463D04
          Length = 145828

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    gcgcgaacgccaggcacgcc 166
              ||||||||||||||||||||
Sbjct: 142406 gcgcgaacgccaggcacgcc 142387



 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    gcgcgaacgccaggcacgcc 166
              ||||||||||||||||||||
Sbjct: 130947 gcgcgaacgccaggcacgcc 130928
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>dbj|AK108029.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-137-B01, full
           insert sequence
          Length = 1723

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 147 gcgcgaacgccaggcacgcc 166
           ||||||||||||||||||||
Sbjct: 512 gcgcgaacgccaggcacgcc 531
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>dbj|AK105666.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-H10, full
            insert sequence
          Length = 1608

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 147  gcgcgaacgccaggcacgcc 166
            ||||||||||||||||||||
Sbjct: 1429 gcgcgaacgccaggcacgcc 1410
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>gb|AC174800.2| Mus musculus BAC clone CH36-125B10 from chromosome 17, complete
            sequence
          Length = 178741

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 62   aactccagcagggtgttctc 81
            ||||||||||||||||||||
Sbjct: 3334 aactccagcagggtgttctc 3353
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 222     cgccgccgagcgtcagcgtc 241
               ||||||||||||||||||||
Sbjct: 2143913 cgccgccgagcgtcagcgtc 2143932
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>gb|AE005174.2| Escherichia coli O157:H7 EDL933, complete genome
          Length = 5528445

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     tcagcgtcacgcccggcacc 253
               ||||||||||||||||||||
Sbjct: 4167189 tcagcgtcacgcccggcacc 4167170
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>dbj|BA000007.2| Escherichia coli O157:H7 DNA, complete genome
          Length = 5498450

 Score = 40.1 bits (20), Expect = 3.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 234     tcagcgtcacgcccggcacc 253
               ||||||||||||||||||||
Sbjct: 4099972 tcagcgtcacgcccggcacc 4099953


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,764,176
Number of Sequences: 3902068
Number of extensions: 1764176
Number of successful extensions: 38414
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 37502
Number of HSP's gapped (non-prelim): 912
length of query: 267
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 245
effective length of database: 17,147,199,772
effective search space: 4201063944140
effective search space used: 4201063944140
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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