Clone Name | rbart50g07 |
---|---|
Clone Library Name | barley_pub |
>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence Length = 176629 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 67 aagattagaagtctttattc 86 |||||||||||||||||||| Sbjct: 97489 aagattagaagtctttattc 97470
>gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8, complete sequence Length = 99108 Score = 40.1 bits (20), Expect = 1.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 aagattagaagtctttattc 86 |||||||||||||||||||| Sbjct: 1414 aagattagaagtctttattc 1433
>emb|Z98597.1|SPAC17H9 S.pombe chromosome I cosmid c17H9 Length = 38515 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 102 gaattgatagaaaacgtta 120 ||||||||||||||||||| Sbjct: 21498 gaattgatagaaaacgtta 21516
>gb|AC116575.4| Mus musculus BAC clone RP23-263I24 from 9, complete sequence Length = 208678 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 16 ttgttccatcttttgacct 34 ||||||||||||||||||| Sbjct: 10085 ttgttccatcttttgacct 10067
>gb|AC102044.7| Mus musculus chromosome 9, clone RP23-303N8, complete sequence Length = 210347 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 16 ttgttccatcttttgacct 34 ||||||||||||||||||| Sbjct: 44421 ttgttccatcttttgacct 44439
>ref|XM_760600.1| Theileria parva strain Muguga chromosome 1 prolyl-tRNA synthetase (TP01_0166) partial mRNA Length = 2087 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 11 atactttgttccatctttt 29 ||||||||||||||||||| Sbjct: 1837 atactttgttccatctttt 1819
>emb|BX927148.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 1/10 Length = 348071 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 cagaatatgtggagcaaaa 57 ||||||||||||||||||| Sbjct: 245417 cagaatatgtggagcaaaa 245435
>gb|AC010026.7| Drosophila melanogaster 3L BAC RP98-1I24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179776 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 agcaaaatcgaaagacaag 69 ||||||||||||||||||| Sbjct: 45137 agcaaaatcgaaagacaag 45119
>gb|AC011907.4| Drosophila melanogaster 3L BAC RP98-18B21 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 164597 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 agcaaaatcgaaagacaag 69 ||||||||||||||||||| Sbjct: 31947 agcaaaatcgaaagacaag 31965
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 39 cagaatatgtggagcaaaa 57 ||||||||||||||||||| Sbjct: 245416 cagaatatgtggagcaaaa 245434
>emb|BX470240.8| Zebrafish DNA sequence from clone CH211-92L17 in linkage group 4, complete sequence Length = 100845 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 55 aaatcgaaagacaagatta 73 ||||||||||||||||||| Sbjct: 10576 aaatcgaaagacaagatta 10594
>gb|AC105165.11| Mus musculus chromosome 18, clone RP24-302C24, complete sequence Length = 186431 Score = 38.2 bits (19), Expect = 6.2 Identities = 22/23 (95%) Strand = Plus / Minus Query: 61 aaagacaagattagaagtcttta 83 |||||||||||||||| |||||| Sbjct: 63470 aaagacaagattagaaatcttta 63448
>gb|AE003468.3| Drosophila melanogaster chromosome 3L, section 2 of 83 of the complete sequence Length = 307657 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 51 agcaaaatcgaaagacaag 69 ||||||||||||||||||| Sbjct: 197186 agcaaaatcgaaagacaag 197204
>emb|AL109769.5|CNS018OY Human chromosome 14 DNA sequence BAC R-501E21 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 161938 Score = 38.2 bits (19), Expect = 6.2 Identities = 19/19 (100%) Strand = Plus / Plus Query: 41 gaatatgtggagcaaaatc 59 ||||||||||||||||||| Sbjct: 99187 gaatatgtggagcaaaatc 99205 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,088,360 Number of Sequences: 3902068 Number of extensions: 1088360 Number of successful extensions: 67643 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 14 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67619 Number of HSP's gapped (non-prelim): 24 length of query: 131 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 110 effective length of database: 17,151,101,840 effective search space: 1886621202400 effective search space used: 1886621202400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)