ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on ch... 46 0.071
2gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
3gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
5dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.28
6gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.28
7gb|AC152113.2| Pichia stipitis clone JGIAHYZ-17L24, complete seq... 42 1.1
8gb|U58736.1| Caenorhabditis elegans cosmid EGAP7, complete sequence 42 1.1
9gb|AE017308.1| Mycoplasma mobile 163K complete genome 42 1.1
10gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, com... 42 1.1
11gb|AC091730.5| Homo sapiens BAC clone RP11-84F15 from 7, complet... 42 1.1
12emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chro... 42 1.1
13emb|AL022600.1|SPBC13G1 S.pombe chromosome II cosmid c13G1 42 1.1
14gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Ca... 42 1.1
15gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Par... 42 1.1
16gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, co... 42 1.1
17gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-7... 42 1.1
18gb|AE002098.2| Neisseria meningitidis MC58, complete genome 42 1.1
19gb|AC092821.11| Homo sapiens 12 BAC RP11-525E9 (Roswell Park Can... 42 1.1
20gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-43... 42 1.1
21dbj|AK024492.1| Homo sapiens mRNA for FLJ00096 protein, partial cds 42 1.1
22emb|AL121652.2|CNS01DS2 BAC sequence from the SPG4 candidate reg... 42 1.1
23emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate reg... 42 1.1
24dbj|AB084781.1| Mycoplasma mobile genes for P123, Gli349, Gli521... 42 1.1
25ref|NM_104060.3| Arabidopsis thaliana ATP binding / kinase/ prot... 40 4.4
26gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, com... 40 4.4
27gb|AF271796.1| Glycine max biotin carboxyl carrier protein subun... 40 4.4
28gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, com... 40 4.4
29gb|AC150210.1| Pan troglodytes chromosome X clone RP43-051H11 ma... 40 4.4
30ref|XM_602606.2| PREDICTED: Bos taurus similar to Amphoterin-ind... 40 4.4
31ref|XM_709535.1| Candida albicans SC5314 coordinator of morphoge... 40 4.4
32ref|XM_709439.1| Candida albicans SC5314 coordinator of morphoge... 40 4.4
33gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome 40 4.4
34gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, com... 40 4.4
35ref|NM_001032746.1| Takifugu rubripes A-kinase-anchor-protein 84... 40 4.4
36ref|XM_545528.2| PREDICTED: Canis familiaris similar to trans-ac... 40 4.4
37gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome... 40 4.4
38gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, com... 40 4.4
39gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, comple... 40 4.4
40emb|AL590714.27| Human DNA sequence from clone RP11-297K8 on chr... 40 4.4
41emb|AL445264.5| Human DNA sequence from clone RP11-475F14 on chr... 40 4.4
42gb|AY063946.1| Arabidopsis thaliana At1g51805 mRNA sequence 40 4.4
43emb|BX842645.1| Mycoplasma mycoides subsp. mycoides SC genomic D... 40 4.4
44emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete ... 40 4.4
45emb|BX640435.1| Bordetella parapertussis strain 12822, complete ... 40 4.4
46gb|AC072026.13| Homo sapiens 3 BAC RP11-500K19 (Roswell Park Can... 40 4.4
47gb|AC026448.5| Homo sapiens chromosome 4 clone CTD-2314I6, compl... 40 4.4
48gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 2734... 40 4.4
49emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in ... 40 4.4
50gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 4.4
51gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F1... 40 4.4
52ref|NM_001039439.1| Tribolium castaneum distal-less (Dll), mRNA 40 4.4
53gb|AF317551.1|AF317551 Tribolium castaneum distal-less (Dll) mRN... 40 4.4
54gb|AY150538.1| Ctenocephalides felis serpin walk I gene, exon 7F... 40 4.4
55gb|AY132359.1| Spironucleus barkhanus prolyl tRNA synthetase (pr... 40 4.4
56gb|AC020940.6| Homo sapiens chromosome 5 clone CTD-2311E21, comp... 40 4.4
57dbj|AB063247.1| Candida maltosa C-GCN4 gene for C-Gcn4p, complet... 40 4.4
58gb|AF205716.1|AF205716 Candida albicans transcriptional activato... 40 4.4
59gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (N... 40 4.4
60gb|AF153880.1|AF153880 Fugu rubripes A-kinase-anchor-protein 84 ... 40 4.4
61gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, co... 40 4.4
62gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome... 40 4.4
63gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, com... 40 4.4
64emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 i... 40 4.4
65gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 4.4
66gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosom... 40 4.4
67dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 4.4
68emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unma... 40 4.4 
>emb|AL162573.15| Human DNA sequence from clone RP11-275J18 on chromosome 13, complete
              sequence
          Length = 166509

 Score = 46.1 bits (23), Expect = 0.071
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 19     caaataaaaacatataaacaatc 41
              |||||||||||||||||||||||
Sbjct: 144811 caaataaaaacatataaacaatc 144789
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>gb|AC136842.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0085C16, complete sequence
          Length = 156069

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                
Query: 146    cctcctgtccacatgttggccacctcatccagcgccgccgtggcggcgcc 195
              |||||||||||| |||   |||||||||| ||||| | ||||||||||||
Sbjct: 110397 cctcctgtccacttgtccaccacctcatcgagcgctgacgtggcggcgcc 110446
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>gb|AC118347.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
              OSJNBa0043E10, complete sequence
          Length = 124591

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 146    cctcctgtccacatgttggccacctcatccagcgccgccgtggcggcgcc 195
              |||||||||||| |||   |||||||||| ||||| | ||||||||||||
Sbjct: 122266 cctcctgtccacttgtccaccacctcatcgagcgctgacgtggcggcgcc 122217
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 146      cctcctgtccacatgttggccacctcatccagcgccgccgtggcggcgcc 195
                |||||||||||| |||   |||||||||| ||||| | ||||||||||||
Sbjct: 22072401 cctcctgtccacttgtccaccacctcatcgagcgctgacgtggcggcgcc 22072450
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>dbj|AK100744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023118G04, full
            insert sequence
          Length = 1862

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                              
Query: 146  cctcctgtccacatgttggccacctcatccagcgccgccgtggcggcgcc 195
            |||||||||||| |||   |||||||||| ||||| | ||||||||||||
Sbjct: 1604 cctcctgtccacttgtccaccacctcatcgagcgctgacgtggcggcgcc 1555
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 146      cctcctgtccacatgttggccacctcatccagcgccgccgtggcggcgcc 195
                |||||||||||| |||   |||||||||| ||||| | ||||||||||||
Sbjct: 22382312 cctcctgtccacttgtccaccacctcatcgagcgctgacgtggcggcgcc 22382361
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>gb|AC152113.2| Pichia stipitis clone JGIAHYZ-17L24, complete sequence
          Length = 43705

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 27    aacatataaacaatcagaatt 47
             |||||||||||||||||||||
Sbjct: 39558 aacatataaacaatcagaatt 39578
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>gb|U58736.1| Caenorhabditis elegans cosmid EGAP7, complete sequence
          Length = 6522

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 20   aaataaaaacatataaacaatcagaattt 48
            ||||||||| ||||||| |||||||||||
Sbjct: 5967 aaataaaaatatataaaaaatcagaattt 5939
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>gb|AE017308.1| Mycoplasma mobile 163K complete genome
          Length = 777079

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 44     aattttacttatttaacaaat 64
              |||||||||||||||||||||
Sbjct: 160872 aattttacttatttaacaaat 160892
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>gb|AC147382.3| Pan troglodytes BAC clone RP43-171M24 from 7, complete sequence
          Length = 198872

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    tcaaataaaaacatataaaca 38
             |||||||||||||||||||||
Sbjct: 15789 tcaaataaaaacatataaaca 15809
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>gb|AC091730.5| Homo sapiens BAC clone RP11-84F15 from 7, complete sequence
          Length = 128032

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     tcaaataaaaacatataaaca 38
              |||||||||||||||||||||
Sbjct: 120420 tcaaataaaaacatataaaca 120400
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>emb|AL136456.13| Human DNA sequence from clone RP11-97K3 on chromosome 1q31.1-31.3,
             complete sequence
          Length = 158745

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 17    ttcaaataaaaacatataaac 37
             |||||||||||||||||||||
Sbjct: 67466 ttcaaataaaaacatataaac 67446
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>emb|AL022600.1|SPBC13G1 S.pombe chromosome II cosmid c13G1
          Length = 28000

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 22    ataaaaacatataaacaatca 42
             |||||||||||||||||||||
Sbjct: 25836 ataaaaacatataaacaatca 25816
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>gb|AC024940.39| Homo sapiens 12 BAC RP11-627K11 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 205952

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 24     aaaaacatataaacaatcagaattt 48
              ||||| |||||||||||||||||||
Sbjct: 188278 aaaaaaatataaacaatcagaattt 188254
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>gb|AC006432.15| Homo sapiens 12p13 PAC RPCI11-726G1 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 180685

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 24    aaaaacatataaacaatcagaattt 48
             ||||| |||||||||||||||||||
Sbjct: 78965 aaaaaaatataaacaatcagaattt 78989
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>gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, complete sequence
          Length = 189639

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 300   caatctcctccttcctcttcgtctc 324
             |||||||||||||||||| ||||||
Sbjct: 50070 caatctcctccttcctctccgtctc 50094
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>gb|AC158502.3| Medicago truncatula chromosome 7 BAC clone mth2-73i16, complete
             sequence
          Length = 124955

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 20    aaataaaaacatataaacaat 40
             |||||||||||||||||||||
Sbjct: 36548 aaataaaaacatataaacaat 36568
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 16      attcaaataaaaacatataaacaat 40
               ||||||||||| |||||||||||||
Sbjct: 1436514 attcaaataaagacatataaacaat 1436490
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>gb|AC092821.11| Homo sapiens 12 BAC RP11-525E9 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 121181

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 24     aaaaacatataaacaatcagaattt 48
              ||||| |||||||||||||||||||
Sbjct: 114687 aaaaaaatataaacaatcagaattt 114663
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>gb|AC012156.14|AC012156 Homo sapiens 12p11-37.2-54.4 BAC RP11-433D24 (Rosewell Park Cancer
            Institute Human Bac Library) complete sequence
          Length = 162200

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 24   aaaaacatataaacaatcagaattt 48
            ||||| |||||||||||||||||||
Sbjct: 1063 aaaaaaatataaacaatcagaattt 1087
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>dbj|AK024492.1| Homo sapiens mRNA for FLJ00096 protein, partial cds
          Length = 4305

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 300  caatctcctccttcctcttcgtctc 324
            |||||||||||||||||| ||||||
Sbjct: 1732 caatctcctccttcctctccgtctc 1708
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>emb|AL121652.2|CNS01DS2 BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 1057B06
            of library RPCI-11 from chromosome 2 of Homo sapiens
            (Human)
          Length = 187182

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 23   taaaaacatataaacaatcag 43
            |||||||||||||||||||||
Sbjct: 6894 taaaaacatataaacaatcag 6914
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>emb|AL133249.1|CNS01DUF BAC sequence from the SPG4 candidate region at 2p21-2p22 BAC 358K12 of
              library RPCI-11 from chromosome 2 of Homo sapiens (Human)
          Length = 168571

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 23     taaaaacatataaacaatcag 43
              |||||||||||||||||||||
Sbjct: 147656 taaaaacatataaacaatcag 147676
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>dbj|AB084781.1| Mycoplasma mobile genes for P123, Gli349, Gli521, P42, complete cds
          Length = 30469

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 44    aattttacttatttaacaaat 64
             |||||||||||||||||||||
Sbjct: 26531 aattttacttatttaacaaat 26551
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>ref|NM_104060.3| Arabidopsis thaliana ATP binding / kinase/ protein kinase/ protein
            serine/threonine kinase/ protein-tyrosine kinase
            AT1G51805 mRNA, complete cds
          Length = 2964

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   aaataaaaacatataaacaa 39
            ||||||||||||||||||||
Sbjct: 2810 aaataaaaacatataaacaa 2791
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>gb|AC121311.16| Mus musculus chromosome 3, clone RP24-317L5, complete sequence
          Length = 221261

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 20     aaataaaaacatataaacaa 39
              ||||||||||||||||||||
Sbjct: 158585 aaataaaaacatataaacaa 158566
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>gb|AF271796.1| Glycine max biotin carboxyl carrier protein subunit (accB-2) gene,
            complete cds; nuclear gene for chloroplast product
          Length = 10502

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 26   aaacatataaacaatcagaa 45
            ||||||||||||||||||||
Sbjct: 5422 aaacatataaacaatcagaa 5403
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>gb|AC113989.6| Mus musculus chromosome 3, clone RP24-130I14, complete sequence
          Length = 159841

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    agattcaaataaaaacatataaac 37
             ||||| ||||||||||||||||||
Sbjct: 53518 agattaaaataaaaacatataaac 53495
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>gb|AC150210.1| Pan troglodytes chromosome X clone RP43-051H11 map human ortholog p21.3,
              complete sequence
          Length = 188797

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 7      aatcttgagattcaaataaaaacatata 34
              ||||||| |||| |||||||||||||||
Sbjct: 107953 aatcttgggattgaaataaaaacatata 107926
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>ref|XM_602606.2| PREDICTED: Bos taurus similar to Amphoterin-induced protein 1
            precursor (Alivin-2) (LOC524284), mRNA
          Length = 1657

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 159  tgttggccacctcatccagc 178
            ||||||||||||||||||||
Sbjct: 1121 tgttggccacctcatccagc 1102
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>ref|XM_709535.1| Candida albicans SC5314 coordinator of morphogenesis
          (CaO19.8938), mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 7  aatcttgagattcaaataaa 26
          ||||||||||||||||||||
Sbjct: 55 aatcttgagattcaaataaa 36
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>ref|XM_709439.1| Candida albicans SC5314 coordinator of morphogenesis
          (CaO19.1358), mRNA
          Length = 972

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 7  aatcttgagattcaaataaa 26
          ||||||||||||||||||||
Sbjct: 55 aatcttgagattcaaataaa 36
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>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 185     gtggcggcgcctccctcgag 204
               ||||||||||||||||||||
Sbjct: 2391738 gtggcggcgcctccctcgag 2391719
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>gb|AC164542.2| Mus musculus chromosome 3, clone RP23-391J12, complete sequence
          Length = 202319

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     atttaacaaatcatacaacc 73
              ||||||||||||||||||||
Sbjct: 143842 atttaacaaatcatacaacc 143823
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>ref|NM_001032746.1| Takifugu rubripes A-kinase-anchor-protein 84 (AKAP84), mRNA
          Length = 2217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  cacctcatccagcgccgccgtggc 189
            |||||| |||||||||||||||||
Sbjct: 2061 cacctcctccagcgccgccgtggc 2038
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>ref|XM_545528.2| PREDICTED: Canis familiaris similar to trans-acting transcription
            factor 9 (LOC488406), mRNA
          Length = 2280

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 173  tccagcgccgccgtggcggc 192
            ||||||||||||||||||||
Sbjct: 1918 tccagcgccgccgtggcggc 1937
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>gb|AC115290.5| Mus musculus BAC clone RP23-65M10 from chromosome 10, complete sequence
          Length = 245623

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     aataaaaacatataaacaat 40
              ||||||||||||||||||||
Sbjct: 128761 aataaaaacatataaacaat 128742
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>gb|AC126410.12| Mus musculus chromosome 5, clone RP23-368H6, complete sequence
          Length = 187058

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    attttacttatttaacaaat 64
             ||||||||||||||||||||
Sbjct: 22540 attttacttatttaacaaat 22521
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>gb|AC093856.3| Homo sapiens BAC clone RP11-518I12 from 7, complete sequence
          Length = 205317

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     ttcaaataaaaacatataaa 36
              ||||||||||||||||||||
Sbjct: 170150 ttcaaataaaaacatataaa 170169
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>emb|AL590714.27| Human DNA sequence from clone RP11-297K8 on chromosome 1 Contains a
             novel gene, the gene for a novel protein (HSPC155), the
             USP21 gene for ubiquitin specific protease 21, the PPOX
             gene for protoporphyrinogen oxidase, the B4GALT3 gene for
             UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase
             polypeptide 3, the ADAMTS4 gene for a disintegrin-like and
             metalloprotease (reprolysin type) with thrombospondin type
             1 motif 4, the NDUFS2 gene for NADH dehydrogenase
             (ubiquinone) Fe-S protein 2 (49kDa (NADH-coenzyme Q
             reductase)), the FCER1G gene for Fc fragment of IgE high
             affinity I  receptor for gamma polypeptide, the APOA2 gene
             for apolipoprotein A-II, the gene for a novel protein
             (FLJ12770), the NR1I3 gene for nuclear receptor subfamily
             1 group I member 3 and the 5' end of a novel gene,
             complete sequence
          Length = 133512

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aaataaaaacatataaacaa 39
             ||||||||||||||||||||
Sbjct: 87019 aaataaaaacatataaacaa 87000
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>emb|AL445264.5| Human DNA sequence from clone RP11-475F14 on chromosome 13, complete
             sequence
          Length = 151454

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 39    atcagaattttacttattta 58
             ||||||||||||||||||||
Sbjct: 89015 atcagaattttacttattta 89034
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>gb|AY063946.1| Arabidopsis thaliana At1g51805 mRNA sequence
          Length = 2917

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 20   aaataaaaacatataaacaa 39
            ||||||||||||||||||||
Sbjct: 2764 aaataaaaacatataaacaa 2745
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>emb|BX842645.1| Mycoplasma mycoides subsp. mycoides SC genomic DNA, complete
            sequence; segment 4/4
          Length = 167954

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   aaataaaaacatataaacaatcag 43
            |||| |||||||||||||||||||
Sbjct: 9002 aaatgaaaacatataaacaatcag 9025
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>emb|BX640450.1| Bordetella bronchiseptica strain RB50, complete genome; segment 14/16
          Length = 346287

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 175    cagcgccgccgtggcggcgc 194
              ||||||||||||||||||||
Sbjct: 162495 cagcgccgccgtggcggcgc 162514
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>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   cagcgccgccgtggcggcgc 194
             ||||||||||||||||||||
Sbjct: 81700 cagcgccgccgtggcggcgc 81719
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>gb|AC072026.13| Homo sapiens 3 BAC RP11-500K19 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 131266

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    attcaaataaaaacatataaacaa 39
             |||||||||||||||| |||||||
Sbjct: 14373 attcaaataaaaacatttaaacaa 14396
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>gb|AC026448.5| Homo sapiens chromosome 4 clone CTD-2314I6, complete sequence
          Length = 104641

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ttcaaataaaaacatataaa 36
             ||||||||||||||||||||
Sbjct: 17778 ttcaaataaaaacatataaa 17797
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>gb|CP000123.1| Mycoplasma capricolum subsp. capricolum ATCC 27343, complete genome
          Length = 1010023

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     aaataaaaacatataaacaatcag 43
              |||| |||||||||||||||||||
Sbjct: 918764 aaatcaaaacatataaacaatcag 918741
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>emb|BX663605.6| Zebrafish DNA sequence from clone DKEY-14I19 in linkage group 7, complete
              sequence
          Length = 170764

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     aaataaaaacatataaacaa 39
              ||||||||||||||||||||
Sbjct: 110367 aaataaaaacatataaacaa 110386
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 174    ccagcgccgccgtggcggcg 193
              ||||||||||||||||||||
Sbjct: 507521 ccagcgccgccgtggcggcg 507502
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>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete
             sequence
          Length = 124511

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    aaataaaaacatataaacaa 39
             ||||||||||||||||||||
Sbjct: 24595 aaataaaaacatataaacaa 24576
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>ref|NM_001039439.1| Tribolium castaneum distal-less (Dll), mRNA
          Length = 1923

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gccacctcatccagcgccgc 183
            ||||||||||||||||||||
Sbjct: 1078 gccacctcatccagcgccgc 1097
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>gb|AF317551.1|AF317551 Tribolium castaneum distal-less (Dll) mRNA, complete cds
          Length = 1923

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gccacctcatccagcgccgc 183
            ||||||||||||||||||||
Sbjct: 1078 gccacctcatccagcgccgc 1097
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>gb|AY150538.1| Ctenocephalides felis serpin walk I gene, exon 7F and partial cds
          Length = 1297

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 40   tcagaattttacttatttaa 59
            ||||||||||||||||||||
Sbjct: 1225 tcagaattttacttatttaa 1206
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>gb|AY132359.1| Spironucleus barkhanus prolyl tRNA synthetase (proS) gene, partial
           cds
          Length = 1816

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 196 tccctcgaggaggccttcaa 215
           ||||||||||||||||||||
Sbjct: 760 tccctcgaggaggccttcaa 779
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>gb|AC020940.6| Homo sapiens chromosome 5 clone CTD-2311E21, complete sequence
          Length = 112922

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    aaataaaaacatataaacaa 39
             ||||||||||||||||||||
Sbjct: 81872 aaataaaaacatataaacaa 81891
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>dbj|AB063247.1| Candida maltosa C-GCN4 gene for C-Gcn4p, complete cds
          Length = 2800

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 7    aatcttgagattcaaataaa 26
            ||||||||||||||||||||
Sbjct: 1630 aatcttgagattcaaataaa 1611
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>gb|AF205716.1|AF205716 Candida albicans transcriptional activator Gcn4p (GCN4) mRNA,
           complete cds
          Length = 1580

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 7   aatcttgagattcaaataaa 26
           ||||||||||||||||||||
Sbjct: 530 aatcttgagattcaaataaa 511
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>gb|AF064564.2|AF064564 Fugu rubripes neurofibromatosis type 1 (NF1), A-kinase anchor protein
             (AKAP84), BAW protein (BAW), and WSB1 protein (WSB1)
             genes, complete cds
          Length = 49254

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 166   cacctcatccagcgccgccgtggc 189
             |||||| |||||||||||||||||
Sbjct: 34448 cacctcctccagcgccgccgtggc 34425
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>gb|AF153880.1|AF153880 Fugu rubripes A-kinase-anchor-protein 84 (AKAP84) mRNA, complete cds
          Length = 2217

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 166  cacctcatccagcgccgccgtggc 189
            |||||| |||||||||||||||||
Sbjct: 2061 cacctcctccagcgccgccgtggc 2038
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>gb|AC101838.17| Mus musculus chromosome 1, clone RP23-242B14, complete sequence
          Length = 178509

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 5     acaatcttgagattcaaataaaaacata 32
             |||||||| ||||||| |||||||||||
Sbjct: 61190 acaatcttcagattcatataaaaacata 61163
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>gb|AC172989.2| Mus musculus BAC clone RP24-556J6 from chromosome 15, complete sequence
          Length = 184996

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     gagattcaaataaaaacata 32
              ||||||||||||||||||||
Sbjct: 146892 gagattcaaataaaaacata 146911
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>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence
          Length = 209938

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     attttacttatttaacaaat 64
              ||||||||||||||||||||
Sbjct: 183538 attttacttatttaacaaat 183519
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>emb|BX545855.16| Zebrafish DNA sequence from clone CH211-212N6 in linkage group 9,
             complete sequence
          Length = 204962

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    aataaaaacatataaacaat 40
             ||||||||||||||||||||
Sbjct: 26228 aataaaaacatataaacaat 26247
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 49      tacttatttaacaaatcata 68
               ||||||||||||||||||||
Sbjct: 2309862 tacttatttaacaaatcata 2309843
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>gb|AC167818.4| Mus musculus BAC clone RP23-120O24 from chromosome 15, complete sequence
          Length = 203474

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 13     gagattcaaataaaaacata 32
              ||||||||||||||||||||
Sbjct: 111451 gagattcaaataaaaacata 111470
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>dbj|AP004971.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT45G21, TM0151,
             complete sequence
          Length = 109264

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 303   tctcctccttcctcttcgtc 322
             ||||||||||||||||||||
Sbjct: 15532 tctcctccttcctcttcgtc 15513
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>emb|AL929365.1|PF13PB1 Plasmodium falciparum chromosome 13, unmapped contig
          Length = 18168

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 16   attcaaataaaaacatataa 35
            ||||||||||||||||||||
Sbjct: 1311 attcaaataaaaacatataa 1330


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,702,567
Number of Sequences: 3902068
Number of extensions: 3702567
Number of successful extensions: 85220
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84895
Number of HSP's gapped (non-prelim): 325
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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