ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart50f08 |
|---|---|
| Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 187 bits (475), Expect = 5e-48 Identities = 82/90 (91%), Positives = 86/90 (95%) Frame = -3 Query: 364 HVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVS 185 HVRTYESD CNQN GWEGSW++WTAAYPATRFYVGLTADDKS+QWVHPKNVYY VAPV+ Sbjct: 215 HVRTYESDKWCNQNLGWEGSWDKWTAAYPATRFYVGLTADDKSHQWVHPKNVYYGVAPVA 274 Query: 184 QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 95 QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA Sbjct: 275 QKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 304
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 85.1 bits (209), Expect = 4e-17 Identities = 44/96 (45%), Positives = 56/96 (58%), Gaps = 6/96 (6%) Frame = -3 Query: 364 HVRTYESDNGCNQNF----GWEGSWNEWTAAYPATRFYVGLTADDK--SYQWVHPKNVYY 203 HVR Y+ D C+ N G WN+WTA YP + Y+GL A + V K +YY Sbjct: 210 HVRFYD-DATCSYNHAGLAGVMAQWNKWTARYPGSHVYLGLAAANVPGKNDNVFIKQLYY 268 Query: 202 SVAPVSQKKDNYGGIMLWDRYFDKQTNYSSLIKYYA 95 + P QK NYGGIMLWDR++DKQT Y +KY+A Sbjct: 269 DLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 69.3 bits (168), Expect = 2e-12 Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 1/84 (1%) Frame = -3 Query: 364 HVRTYESDNGCNQNFGWEGSWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYSVAPV 188 HVR + D C + + SW +W AA+P ++ Y+GL A ++ W+ K++YY + Sbjct: 207 HVRMF-GDEQCTMSPRY--SWEKWAAAFPGSKVYIGLVASPEQDSAWMFQKDLYYEMLQF 263 Query: 187 SQKKDNYGGIMLWDRYFDKQTNYS 116 + NYGG+ ++DRYFDK+ NY+ Sbjct: 264 VRSLPNYGGLAIYDRYFDKKANYT 287
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 58.9 bits (141), Expect = 3e-09 Identities = 29/70 (41%), Positives = 43/70 (61%), Gaps = 2/70 (2%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 134 SWN WT++ +T ++GL A + + P NV S + PV ++ YGG+MLW +Y+D Sbjct: 229 SWNRWTSSINSTGSFMGLPASSAAAGRGFIPANVLTSQILPVIKRSPKYGGVMLWSKYYD 288 Query: 133 KQTNYSSLIK 104 Q+ YSS IK Sbjct: 289 DQSGYSSSIK 298
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 55.5 bits (132), Expect = 3e-08 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 2/69 (2%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFD 134 SWN+WT + A +F++GL A ++ ++ P + + P +K YGG+MLW +++D Sbjct: 230 SWNKWTTSIAAQKFFLGLPAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWD 289 Query: 133 KQTNYSSLI 107 + YSS I Sbjct: 290 DKNGYSSSI 298
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 53.9 bits (128), Expect = 9e-08 Identities = 32/72 (44%), Positives = 40/72 (55%), Gaps = 5/72 (6%) Frame = -3 Query: 304 WNEWTAAYPATRFYVGL----TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRY 140 WN+WT+ PA + Y+GL TA Y PK V S V P + YGG+MLW+R Sbjct: 224 WNQWTSI-PAKKLYIGLPAAKTAAGNGYI---PKQVLMSQVLPFLKGSSKYGGVMLWNRK 279 Query: 139 FDKQTNYSSLIK 104 FD Q YSS I+ Sbjct: 280 FDVQCGYSSAIR 291
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 52.8 bits (125), Expect = 2e-07 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYSVAPVSQKKDNYGGIMLWDRYFD 134 SWN WT + A + ++GL A ++ +V P + + P +K YGG+MLW +++D Sbjct: 227 SWNRWTTSINAGKIFLGLPAAPEAAGSGYVPPDVLISRILPEIKKSPKYGGVMLWSKFYD 286 Query: 133 KQTNYSSLI 107 + YSS I Sbjct: 287 DKNGYSSSI 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 49.7 bits (117), Expect = 2e-06 Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 3/71 (4%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 137 +WN+WT++ A + ++G+ A D + + P +V S V P + YGG+M+WDR+ Sbjct: 221 AWNQWTSSQ-AKQVFLGVPASDAAAPSGGLIPADVLTSQVLPAIKTSPKYGGVMIWDRFN 279 Query: 136 DKQTNYSSLIK 104 D Q+ YS+ IK Sbjct: 280 DAQSGYSNAIK 290
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 48.9 bits (115), Expect = 3e-06 Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 3/71 (4%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSYQ--WVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYF 137 SWN+WTA +P ++ Y+GL A ++ P +V S V P + NYGG+MLW + F Sbjct: 221 SWNQWTA-FPTSKLYMGLPAAREAAPSGGFIPADVLISQVLPTIKASSNYGGVMLWSKAF 279 Query: 136 DKQTNYSSLIK 104 D YS IK Sbjct: 280 D--NGYSDSIK 288
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 46.6 bits (109), Expect = 1e-05 Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTADDKSY-QWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 134 SWN+WT++ A + ++G+ A + P +V S V P + YGG+MLWDR+ D Sbjct: 227 SWNQWTSSQ-AKQLFLGVPASTAAAGSGFIPADVLTSQVLPTIKGSSKYGGVMLWDRFND 285 Query: 133 KQTNYSSLI 107 Q+ YS I Sbjct: 286 GQSGYSGAI 294
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 41.6 bits (96), Expect = 5e-04 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%) Frame = -3 Query: 307 SWNEWTAAYPATRFYVGLTAD-DKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFD 134 SWN+WT A + ++GL A D + P + S V P + YGG+MLW + +D Sbjct: 224 SWNQWTTVQ-ANQIFLGLPASTDAAGSGFIPADALTSQVLPTIKGSAKYGGVMLWSKAYD 282 Query: 133 KQTNYSSLIK 104 + YSS IK Sbjct: 283 --SGYSSAIK 290
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 40.8 bits (94), Expect = 8e-04 Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%) Frame = -3 Query: 304 WNEWTAAYPATRFYVGL-TADDKSYQWVHPKNVYYS-VAPVSQKKDNYGGIMLWDRYFDK 131 WN+W A A + ++GL A + P +V S V P+ YGG+MLW +++D Sbjct: 223 WNQWNAIQ-AGKIFLGLPAAQGAAGSGFIPSDVLVSQVLPLINGSPKYGGVMLWSKFYD- 280 Query: 130 QTNYSSLIK 104 YSS IK Sbjct: 281 -NGYSSAIK 288
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 35.4 bits (80), Expect = 0.034 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 11/98 (11%) Frame = -3 Query: 361 VRTYESDNGCNQNFG----WEGSWNEWT-AAYPATR-FYVGLTADDKSYQ---WVHPKNV 209 VR Y +D C + G +W WT + YP + ++ L A + ++ P + Sbjct: 211 VRFY-NDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSAL 269 Query: 208 YYSVAP-VSQKKDNYGGIMLWDRYFDKQTNYS-SLIKY 101 V P + + Y GI LW+R DK+T YS ++I+Y Sbjct: 270 IGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>NIRB_KLEOX (Q06458) Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)| Length = 957 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 259 GLTADDKSYQWVH-PKNVYYSVAPVSQKKDNYGGIMLWD 146 G T +SYQW H P+ VY + + K+ GG+++ D Sbjct: 336 GRTPGCQSYQWTHGPQQVYKKIVVSADGKNLLGGVLVGD 374
>G6PI_NEUCR (Q7S986) Glucose-6-phosphate isomerase (EC 5.3.1.9) (GPI)| (Phosphoglucose isomerase) (PGI) (Phosphohexose isomerase) (PHI) Length = 561 Score = 28.9 bits (63), Expect = 3.2 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%) Frame = -3 Query: 322 FGWE----GSWNEWTAAYPATRFYVGLTADDKSYQWVHPKNVYYSVAPVSQKKDNYGGIM 155 FG+E G ++ W+A + YVG K H + ++ AP+ + GGI+ Sbjct: 276 FGFESWVGGRYSVWSAIGLSVALYVGYENFHKFLAGAHAMDNHFRTAPLKENIPVLGGIL 335 Query: 154 -LW-DRYFDKQTN 122 +W +++ QT+ Sbjct: 336 SVWYSNFYNAQTH 348
>PIMT_GEOSL (Q74CZ5) Protein-L-isoaspartate O-methyltransferase (EC 2.1.1.77)| (Protein-beta-aspartate methyltransferase) (PIMT) (Protein L-isoaspartyl methyltransferase) (L-isoaspartyl protein carboxyl methyltransferase) Length = 207 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/35 (42%), Positives = 21/35 (60%) Frame = -2 Query: 251 GGRQVLPVGTPQERLLQRRAGVAEEGQLRRHHALG 147 GGR V+PVGT E++L R E+G + R + G Sbjct: 158 GGRLVIPVGTQFEQVLV-RVVKQEDGSVERENITG 191
>NUOJ_SHIFL (P0AFE3) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.3 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOLI (P0AFE0) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.3 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECOL6 (P0AFE1) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.3 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>NUOJ_ECO57 (P0AFE2) NADH-quinone oxidoreductase chain J (EC 1.6.99.5) (NADH| dehydrogenase I, chain J) (NDH-1, chain J) (NUO10) Length = 184 Score = 27.3 bits (59), Expect = 9.3 Identities = 7/13 (53%), Positives = 13/13 (100%) Frame = -2 Query: 350 RERQWVQPELWVG 312 +ERQW++P++W+G Sbjct: 83 QERQWLKPQVWIG 95
>ILVC_THEFY (Q47SB6) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 331 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%) Frame = -2 Query: 362 REDIRE-RQWVQPELWVGGLVERVDGGVPCHPVLRRAHGGRQVLPVGTPQERLL 204 RE++R+ Q VQ + LVE D G P R A G Q+ VGT L+ Sbjct: 273 REEMRKILQEVQDGTYAKELVEEFDKGRPNFLKRREAEQGEQIEKVGTELRSLM 326
>3HAO_RAT (P46953) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 271 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 179 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>3HAO_MOUSE (Q78JT3) 3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6)| (3-HAO) (3-hydroxyanthranilic acid dioxygenase) (3-hydroxyanthranilate oxygenase) Length = 286 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/31 (38%), Positives = 19/31 (61%) Frame = -3 Query: 271 RFYVGLTADDKSYQWVHPKNVYYSVAPVSQK 179 R+YVG T D +W H K++ +AP+ Q+ Sbjct: 117 RYYVGDTEDVLFEKWFHCKDLGTQLAPIIQE 147
>MOK11_SCHPO (Q09854) Cell wall alpha-1,3-glucan synthase mok11 (EC 2.4.1.183)| Length = 2397 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/81 (23%), Positives = 33/81 (40%), Gaps = 24/81 (29%) Frame = -3 Query: 358 RTYESDNG-CN-------QNFGWEGS------WNEWTAA----------YPATRFYVGLT 251 +TY+ +N CN +GW+G W+E T + YP R++ + Sbjct: 894 QTYDGNNTYCNLSGWSQSSRYGWKGHHIMVQYWSELTGSSNYMQESDLEYPYKRWFPHVF 953 Query: 250 ADDKSYQWVHPKNVYYSVAPV 188 D QW H ++ + P+ Sbjct: 954 MDSDYTQWTHDSDIRNRMLPL 974
>HYAL1_MOUSE (Q91ZJ9) Hyaluronidase-1 precursor (EC 3.2.1.35) (Hyal-1)| (Hyaluronoglucosaminidase-1) Length = 462 Score = 27.3 bits (59), Expect = 9.3 Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%) Frame = -3 Query: 331 NQNFGWEGSWNEWTAAYPATRFYVGLTADDKSYQWV-HPKNVYYSVAPVSQKKDNYGGIM 155 N GW WN+ A YP+ L KS +V H VA VS +D + +M Sbjct: 257 NDQLGW--LWNQSYALYPSIYLPAALMGTGKSQMYVRHRVQEALRVAIVS--RDPHVPVM 312 Query: 154 LWDRYFDKQTNY 119 + + F + T+Y Sbjct: 313 PYVQIFYEMTDY 324 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,140,970 Number of Sequences: 219361 Number of extensions: 747617 Number of successful extensions: 2275 Number of sequences better than 10.0: 25 Number of HSP's better than 10.0 without gapping: 2225 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2266 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
