ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inh... 456 e-125
2dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhi... 242 7e-61
3dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
4dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
5gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 56 8e-05
6dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
7dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
8dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 8e-05
9gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 56 8e-05
10dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for ch... 56 8e-05
11dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homolo... 56 8e-05
12dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homolo... 56 8e-05
13dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homolo... 56 8e-05
14dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homolo... 56 8e-05
15dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homolo... 56 8e-05
16dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for ... 56 8e-05
17dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
18dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
19dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 3e-04
20ref|NM_193094.1| Oryza sativa (japonica cultivar-group), mRNA 48 0.020
21dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
22dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.020
23dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.020
24ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus simila... 44 0.31
25gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv.... 44 0.31
26gb|AY107125.1| Zea mays PCO125117 mRNA sequence 44 0.31
27dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.2
28emb|AL731557.7| Human DNA sequence from clone RP11-501J20 on chr... 40 4.9
29gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, com... 40 4.9
30dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DN... 40 4.9
31dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 4.9
32gb|AC005661.1|AC005661 citb_54_o_2, complete sequence 40 4.9 
>emb|AJ422119.1|TAE422119 Triticum aestivum mRNA for xylanase inhibitor protein I (xipI gene)
          Length = 915

 Score =  456 bits (230), Expect = e-125
 Identities = 263/274 (95%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 151
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 915 tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtatcggtccca 856

                                                                       
Query: 152 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 211
           ||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 855 gagcatgatgccgccgtagttgtccttcttctgcgccaccggcgcgacgccgtagtagac 796

                                                                       
Query: 212 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 271
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 795 gttcttggggtgtacccactggtgggacttgtcgtccgccgtgagcccgacgtagaaccg 736

                                                                       
Query: 272 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 331
           |||||| ||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 735 ggtggccgggtacgccgccgtccacttgtcccacgagccctcccacccaaggttctggtt 676

                                             
Query: 332 gcacccattgtcgctctcgtatgtcctcacgtgg 365
           |||||  |||||||||||||| ||||||||||||
Sbjct: 675 gcaccacttgtcgctctcgtaggtcctcacgtgg 642
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>dbj|AB204556.1| Triticum aestivum Xip-III gene for xylanase inhibitor XIP-III,
           complete cds
          Length = 934

 Score =  242 bits (122), Expect = 7e-61
 Identities = 224/258 (86%)
 Strand = Plus / Minus

                                                                       
Query: 92  tcaggcgtagtacttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtccca 151
           ||||||||||||||||||  |||| ||||||| | |||||||||||||||| ||||||||
Sbjct: 932 tcaggcgtagtacttgatgtagctactgtagtcgctctgcttgtcgaagtatcggtccca 873

                                                                       
Query: 152 gagcatgatgccgccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagac 211
           ||||||||  ||||||||||||||||||||||||  |||||||| || || |||||||||
Sbjct: 872 gagcatgaccccgccgtagttgtccttcttctgcaccaccggcgtgatgccgtagtagac 813

                                                                       
Query: 212 gttcttggggtgtacccactggtaggacttgtcgtccgccgtgagcccgacgtagaaccg 271
           |||||||||||||| ||||||||| ||||| ||||| || |||||||||| | |||||||
Sbjct: 812 gttcttggggtgtatccactggtacgacttctcgtcggcggtgagcccgatgaagaaccg 753

                                                                       
Query: 272 ggtggcagggtacgccgccgtccactcgttccacgagccctcccacccaaagttctggtt 331
           |||||| ||||||||||||||||||  || |||||   |||||||| |   || ||||||
Sbjct: 752 ggtggccgggtacgccgccgtccacctgtcccacgcctcctcccacgccccgtactggtt 693

                             
Query: 332 gcacccattgtcgctctc 349
           |||| | |||||||||||
Sbjct: 692 gcacgccttgtcgctctc 675
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                            
Query: 104      cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 163
                ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 14484656 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 14484715

                                                                            
Query: 164      gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 223
                |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 14484716 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 14484775

                       
Query: 224      tacccac 230
                 ||||||
Sbjct: 14484776 cacccac 14484782



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 261      acgtagaaccgggtggcagggtacgccgccgtc 293
                ||||||||||| || || |||||||||||||||
Sbjct: 14484813 acgtagaaccgtgtcgccgggtacgccgccgtc 14484845
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>dbj|AP004732.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBa0021M10
          Length = 163416

 Score =  101 bits (51), Expect = 2e-18
 Identities = 108/127 (85%)
 Strand = Plus / Plus

                                                                         
Query: 104   cttgatcaagctgctgtagttggtctgcttgtcgaagtaccggtcccagagcatgatgcc 163
             ||||| || |||| |||||||| || |||||||| |||| |||||||||| ||||| |||
Sbjct: 77830 cttgaccatgctggtgtagttgctcagcttgtcgtagtatcggtcccagatcatgaagcc 77889

                                                                         
Query: 164   gccgtagttgtccttcttctgcgacaccggcgcgacgctgtagtagacgttcttggggtg 223
             |||||||||||||  ||||||||    ||| ||||||  |||||||||||||||||||||
Sbjct: 77890 gccgtagttgtccgccttctgcgtggacggggcgacgtcgtagtagacgttcttggggtg 77949

                    
Query: 224   tacccac 230
              ||||||
Sbjct: 77950 cacccac 77956



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 261   acgtagaaccgggtggcagggtacgccgccgtc 293
             ||||||||||| || || |||||||||||||||
Sbjct: 77987 acgtagaaccgtgtcgccgggtacgccgccgtc 78019
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>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0022E16 map C481S, complete sequence
          Length = 179668

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                             
Query: 125   ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
             ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 82293 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 82246



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                        
Query: 131   cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
             ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 88121 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 88163



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 133   tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
             |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 83663 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 83703
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 125      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28123738 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28123691



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 131      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28129566 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28129608



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 133      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28125108 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28125148
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>dbj|AK102862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033111J19, full
           insert sequence
          Length = 1176

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 988 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 941
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>dbj|AK063939.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-E01, full
           insert sequence
          Length = 1234

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 989 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 942
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                                
Query: 125      ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
                ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 28108616 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 28108569



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 131      cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 28114444 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 28114486



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                         
Query: 133      tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
                |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 28109986 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 28110026
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>dbj|D55712.1| Oryza sativa (japonica cultivar-group) mRNA for chitinase, complete
           cds
          Length = 1220

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 963 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 916
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>dbj|AB027420.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C60571
          Length = 1220

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 975 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 928
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>dbj|AB027419.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C11701
          Length = 1171

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 933 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 886
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>dbj|AB027418.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C12269
          Length = 1214

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 973 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 926
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>dbj|AB027417.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds, clone:C3540
          Length = 1229

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 972 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 925
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>dbj|AB027416.1| Oryza sativa mRNA for class III chitinase homologue (OsChib3H-a),
           complete cds,clone:C10295
          Length = 1199

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 954 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 907
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>dbj|AB027415.1| Oryza sativa (japonica cultivar-group) mRNA for class III chitinase
           homologue (OsChib3H-a)H-, complete cds, clone:C60129
          Length = 1187

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 43/48 (89%)
 Strand = Plus / Minus

                                                           
Query: 125 ggtctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagtt 172
           ||||||||||||| || ||| ||||||||||||||| ||||| |||||
Sbjct: 957 ggtctgcttgtcgtagaacctgtcccagagcatgattccgccatagtt 910
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>dbj|AK102649.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033101A20, full
           insert sequence
          Length = 1162

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 927 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 885
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>dbj|AK101155.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027E14, full
           insert sequence
          Length = 1193

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 931 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 889
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>dbj|AK073595.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048M21, full
           insert sequence
          Length = 1153

 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 131 cttgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           ||||||| |||| || ||||||||||||| |||||||||||||
Sbjct: 918 cttgtcgtagtagcgatcccagagcatgacgccgccgtagttg 876
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>ref|NM_193094.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 916 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 857

                   
Query: 187 acaccggc 194
           || |||||
Sbjct: 856 actccggc 849
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                            
Query: 127      tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
                |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 26162477 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 26162418

                        
Query: 187      acaccggc 194
                || |||||
Sbjct: 26162417 actccggc 26162410
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>dbj|AK111717.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A01, full
           insert sequence
          Length = 1165

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                       
Query: 127 tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
           |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 964 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 905

                   
Query: 187 acaccggc 194
           || |||||
Sbjct: 904 actccggc 897
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>dbj|AP004339.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0519E12
          Length = 152448

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 57/68 (83%)
 Strand = Plus / Minus

                                                                         
Query: 127   tctgcttgtcgaagtaccggtcccagagcatgatgccgccgtagttgtccttcttctgcg 186
             |||||||||||  ||| || ||||||| ||||| ||||||||||||| ||  ||||||| 
Sbjct: 54335 tctgcttgtcgctgtagcgatcccagatcatgaagccgccgtagttggccgccttctgca 54276

                     
Query: 187   acaccggc 194
             || |||||
Sbjct: 54275 actccggc 54268
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>ref|XM_792322.1| PREDICTED: Strongylocentrotus purpuratus similar to putative
           endoplasmic reticulum protein, with at least 5
           transmembrane domains, of eukaryotic origin (56.3 kD)
           (4P439) (LOC592817), mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 114 ctgctgtagttggtctgcttgt 135
           ||||||||||||||||||||||
Sbjct: 86  ctgctgtagttggtctgcttgt 107
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>gb|S82314.1| PRm 3=chitinase {clone CHEM 5} [Zea mays=maize, cv. INRA 258,
           mercuric chloride-treated, leaves, mRNA Partial, 945 nt]
          Length = 945

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 144 cggtcccagagcatgatgccgccgtagttg 173
           |||||||| | |||||||||||||||||||
Sbjct: 870 cggtcccacaccatgatgccgccgtagttg 841
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>gb|AY107125.1| Zea mays PCO125117 mRNA sequence
          Length = 1252

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 144 cggtcccagagcatgatgccgccgtagttg 173
           |||||||| | |||||||||||||||||||
Sbjct: 928 cggtcccacaccatgatgccgccgtagttg 899
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>dbj|AK064281.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-105-G04, full
           insert sequence
          Length = 1161

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 133 tgtcgaagtaccggtcccagagcatgatgccgccgtagttg 173
           |||||||||  |||| |||||||| || |||||||||||||
Sbjct: 940 tgtcgaagtgtcggttccagagcacgacgccgccgtagttg 900
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>emb|AL731557.7| Human DNA sequence from clone RP11-501J20 on chromosome 10 Contains two
             novel genes, the gene for a novel protein (possible
             ortholog of rodent ventral anterior homeobox containing
             gene 1 (VAX1)), a ribosomal protein L12 (RPL12)
             pseudogene, the 5' end of the SLC18A2 gene for member 2
             solute carrier family 18 (vesicular monoamine), a novel
             gene and ten CpG islands, complete sequence
          Length = 142068

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    cagcaacacatcagaatcaa 53
             ||||||||||||||||||||
Sbjct: 96599 cagcaacacatcagaatcaa 96618
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>gb|AC074327.6| Homo sapiens chromosome 10 clone RP11-556E13, complete sequence
          Length = 189250

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 31     ttgcagcaacacatcagaat 50
              ||||||||||||||||||||
Sbjct: 159469 ttgcagcaacacatcagaat 159488
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>dbj|AP005645.1| Streptomyces avermitilis MA-4680 plasmid SAP1 DNA, complete sequence
          Length = 94287

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 152   gagcatgatgccgccgtagttgtccttc 179
             ||||||||||| |||| |||||||||||
Sbjct: 66383 gagcatgatgcggccggagttgtccttc 66356
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     ttctgcgacaccggcgcgac 199
               ||||||||||||||||||||
Sbjct: 5735197 ttctgcgacaccggcgcgac 5735178
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>gb|AC005661.1|AC005661 citb_54_o_2, complete sequence
          Length = 84633

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    cagcaacacatcagaatcaa 53
             ||||||||||||||||||||
Sbjct: 76771 cagcaacacatcagaatcaa 76790


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,935,963
Number of Sequences: 3902068
Number of extensions: 1935963
Number of successful extensions: 32490
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 32345
Number of HSP's gapped (non-prelim): 142
length of query: 366
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 344
effective length of database: 17,147,199,772
effective search space: 5898636721568
effective search space used: 5898636721568
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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