>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence
          Length = 141509

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     caaaaaggtttctaaatttca 29
             |||||||||||||||||||||
Sbjct: 90956 caaaaaggtttctaaatttca 90976

>gb|AC099525.5| Papio anubis clone RP41-277O17, complete sequence
          Length = 163567

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     caaaaaggtttctaaatttca 29
             |||||||||||||||||||||
Sbjct: 65833 caaaaaggtttctaaatttca 65853

>gb|AC013526.7| Homo sapiens, clone RP11-114I24, complete sequence
          Length = 156895

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    ttctaaatttcaccaaatctg 38
             |||||||||||||||||||||
Sbjct: 39255 ttctaaatttcaccaaatctg 39235

>gb|AC160562.2| Mus musculus BAC clone RP23-9A12 from chromosome 9, complete sequence
          Length = 241034

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 72     ggaaataaccaaaattatagt 92
              |||||||||||||||||||||
Sbjct: 197914 ggaaataaccaaaattatagt 197934

>gb|AC022692.11| Homo sapiens chromosome 15, clone RP11-530L17, complete sequence
          Length = 173604

 Score = 42.1 bits (21), Expect = 0.28
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 18    ttctaaatttcaccaaatctg 38
             |||||||||||||||||||||
Sbjct: 82364 ttctaaatttcaccaaatctg 82384

>emb|AL355579.12| Human DNA sequence from clone RP1-146C10 on chromosome 20 Contains STSs
             and GSSs, complete sequence
          Length = 55435

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 59    gacagcacaaaacggaaataaccaaaat 86
             ||||||||||||| ||||||||| ||||
Sbjct: 51612 gacagcacaaaactgaaataacccaaat 51639

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 75      aataaccaaaattatagtgt 94
               ||||||||||||||||||||
Sbjct: 6852874 aataaccaaaattatagtgt 6852893

>gb|AC022415.5|AC022415 Homo sapiens chromosome 19 clone CTC-359D24, complete sequence
          Length = 180510

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 16    gtttctaaatttcaccaaatctgc 39
             ||||||||||||| ||||||||||
Sbjct: 80705 gtttctaaatttctccaaatctgc 80728

>dbj|AP005197.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0592C06
          Length = 160071

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 75     aataaccaaaattatagtgt 94
              ||||||||||||||||||||
Sbjct: 147008 aataaccaaaattatagtgt 147027

>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
            clone:OJ1118_B03
          Length = 108992

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 75   aataaccaaaattatagtgt 94
            ||||||||||||||||||||
Sbjct: 9129 aataaccaaaattatagtgt 9148

>gb|AC171536.3| Mus musculus chromosome 18, clone RP23-189P10, complete sequence
          Length = 209499

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 65    acaaaacggaaataaccaaaatta 88
             |||||| |||||||||||||||||
Sbjct: 38484 acaaaagggaaataaccaaaatta 38507

>gb|AC102550.9| Mus musculus chromosome 18, clone RP23-153A8, complete sequence
          Length = 177220

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 65     acaaaacggaaataaccaaaatta 88
              |||||| |||||||||||||||||
Sbjct: 104186 acaaaagggaaataaccaaaatta 104209

>gb|AC172870.1| Brassica rapa subsp. pekinensis clone KBrH004A06, complete sequence
          Length = 145603

 Score = 40.1 bits (20), Expect = 1.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    aaaacggaaataaccaaaat 86
             ||||||||||||||||||||
Sbjct: 11099 aaaacggaaataaccaaaat 11080

>gb|AC149328.2| Phakopsora pachyrhizi clone JGIAFNA-13C16, complete sequence
          Length = 36270

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    caaaattatagtgtcaact 99
             |||||||||||||||||||
Sbjct: 31127 caaaattatagtgtcaact 31145

>gb|AC101593.16| Mus musculus chromosome 18, clone RP23-198A7, complete sequence
          Length = 206936

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 10    aaaaaggtttctaaatttcacca 32
             ||||||||||||||| |||||||
Sbjct: 65864 aaaaaggtttctaaagttcacca 65842

>gb|AC111130.17| Mus musculus chromosome 5, clone RP23-339G19, complete sequence
          Length = 212923

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 74     aaataaccaaaattatagt 92
              |||||||||||||||||||
Sbjct: 156209 aaataaccaaaattatagt 156191

>gb|CP000068.1| Trypanosoma brucei chromosome 5, complete sequence
          Length = 1608198

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 72      ggaaataaccaaaattata 90
               |||||||||||||||||||
Sbjct: 1543378 ggaaataaccaaaattata 1543360

>gb|AC159453.1| Trypanosoma brucei chromosome 5 clone RPCI93-5M21, complete sequence
          Length = 106046

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ggaaataaccaaaattata 90
             |||||||||||||||||||
Sbjct: 41226 ggaaataaccaaaattata 41208

>gb|AC135915.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone
              OSJNBa0082F22, complete sequence
          Length = 176038

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 76     ataaccaaaattatagtgt 94
              |||||||||||||||||||
Sbjct: 111141 ataaccaaaattatagtgt 111123

>emb|CR932273.1|CNS0KYK4 Centrin-binding protein, complete Paramecium tetraurelia macronuclear
            gene
          Length = 6632

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 11   aaaaggtttctaaatttca 29
            |||||||||||||||||||
Sbjct: 1114 aaaaggtttctaaatttca 1132

>gb|AC104465.4| Homo sapiens chromosome 1 clone RP5-1051D14, complete sequence
          Length = 144786

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     gaaataaccaaaattatag 91
              |||||||||||||||||||
Sbjct: 113580 gaaataaccaaaattatag 113598

>gb|AC133080.3| Mus musculus BAC clone RP24-280M20 from chromosome 12, complete
             sequence
          Length = 159903

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 72    ggaaataaccaaaattata 90
             |||||||||||||||||||
Sbjct: 56222 ggaaataaccaaaattata 56204

>gb|AC108945.4| Mus musculus BAC clone RP23-119J11 from 15, complete sequence
          Length = 200294

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     aaaattatagtgtcaactt 100
              |||||||||||||||||||
Sbjct: 116471 aaaattatagtgtcaactt 116453

>gb|AC141115.22| Medicago truncatula clone mth2-16b23, complete sequence
          Length = 126187

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 16     gtttctaaatttcaccaaa 34
              |||||||||||||||||||
Sbjct: 105009 gtttctaaatttcaccaaa 104991

>gb|AC158467.3| Mus musculus chromosome 3, clone RP23-116C1, complete sequence
          Length = 173252

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 25     tttcaccaaatctgctcctccag 47
              |||||| ||||||||||||||||
Sbjct: 122007 tttcacaaaatctgctcctccag 121985

>emb|AL020989.2|HS192P9 Human DNA sequence from clone RP1-192P9 on chromosome Xp11.23-11.4
             Contains a transmembrane 4 superfamily member 11
             (plasmolipin) (PMLP) pseudogene and a CpG island, complete
             sequence
          Length = 141132

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 13    aaggtttctaaatttcacc 31
             |||||||||||||||||||
Sbjct: 17386 aaggtttctaaatttcacc 17368

>emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3
          Length = 321250

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 65     acaaaacggaaataaccaa 83
              |||||||||||||||||||
Sbjct: 177174 acaaaacggaaataaccaa 177192

>gb|AC009319.19| Homo sapiens 3 BAC RP11-297K7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 172581

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 19    tctaaatttcaccaaatct 37
             |||||||||||||||||||
Sbjct: 24701 tctaaatttcaccaaatct 24719

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 76       ataaccaaaattatagtgt 94
                |||||||||||||||||||
Sbjct: 13148364 ataaccaaaattatagtgt 13148346

>gb|AC149314.2| Phakopsora pachyrhizi clone JGIAFNA-101K12, complete sequence
          Length = 35483

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 81    caaaattatagtgtcaact 99
             |||||||||||||||||||
Sbjct: 23885 caaaattatagtgtcaact 23903

>emb|AL158802.1|CNS01RGO Human chromosome 14 DNA sequence BAC C-2008K18 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 194523

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    aaaattatagtgtcaactt 100
             |||||||||||||||||||
Sbjct: 97416 aaaattatagtgtcaactt 97434

>emb|AL139296.4|CNS01DXF Human chromosome 14 DNA sequence BAC C-2504D12 of library CalTech-D
            from chromosome 14 of Homo sapiens (Human), complete
            sequence
          Length = 209710

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 82   aaaattatagtgtcaactt 100
            |||||||||||||||||||
Sbjct: 1495 aaaattatagtgtcaactt 1513

>gb|AY894708.1|AH014651S1 Phytalmia alcicornis NADH dehydrogenase subunit 1 (ND1) gene,
          partial cds; mitochondrial
          Length = 98

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                 
Query: 66 caaaacggaaataaccaaaatta 88
          ||||||| |||||||||||||||
Sbjct: 45 caaaacgcaaataaccaaaatta 67

>dbj|AP001677.1| Homo sapiens genomic DNA, chromosome 21q, section 21/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 67     aaaacggaaataaccaaaattat 89
              |||| ||||||||||||||||||
Sbjct: 139761 aaaagggaaataaccaaaattat 139739

>gb|AC103945.12| Mus musculus chromosome 3, clone RP23-126A18, complete sequence
          Length = 205072

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 25   tttcaccaaatctgctcctccag 47
            |||||| ||||||||||||||||
Sbjct: 1857 tttcacaaaatctgctcctccag 1835

>dbj|AP000946.3| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B335N5,
             LL56-APP region, complete sequence
          Length = 137343

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 67    aaaacggaaataaccaaaattat 89
             |||| ||||||||||||||||||
Sbjct: 23083 aaaagggaaataaccaaaattat 23061

>dbj|AP003465.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1043D8
          Length = 230879

 Score = 38.2 bits (19), Expect = 4.4
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 8      tcaaaaaggtttctaaatttcac 30
              ||||| |||||||||||||||||
Sbjct: 163941 tcaaataggtttctaaatttcac 163919


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,092,817
Number of Sequences: 3902068
Number of extensions: 1092817
Number of successful extensions: 81374
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81255
Number of HSP's gapped (non-prelim): 119
length of query: 100
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 79
effective length of database: 17,151,101,840
effective search space: 1354937045360
effective search space used: 1354937045360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)