Clone Name | rbart50e07 |
---|---|
Clone Library Name | barley_pub |
>PHSB_PHAVU (P02853) Phaseolin, beta-type precursor| Length = 421 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +3 Query: 123 IRRSVHINMRDIH-YFLKSYELQQEYIPEGKKH---TGFRKNLEQV 248 I+ ++ +N IH +FL S E QQ Y+ E KH F E++ Sbjct: 156 IQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEI 201
>PHSA_PHAVU (P07219) Phaseolin, alpha-type precursor| Length = 436 Score = 28.5 bits (62), Expect = 4.7 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%) Frame = +3 Query: 123 IRRSVHINMRDIH-YFLKSYELQQEYIPEGKKH---TGFRKNLEQV 248 I+ ++ +N IH +FL S E QQ Y+ E KH F E++ Sbjct: 157 IQLAMPVNNPQIHEFFLSSTEAQQSYLQEFSKHILEASFNSKFEEI 202
>Y832_METJA (Q58242) Hypothetical protein MJ0832 [Contains: Mja rnr-1 intein; Mja| rnr-2 intein] Length = 1750 Score = 28.1 bits (61), Expect = 6.2 Identities = 13/34 (38%), Positives = 18/34 (52%) Frame = +2 Query: 47 IQKGSYGRIRYISTRTKIGASFGGTYPSFRSHKH 148 I+K SYG YI+ + K+ FG +F S H Sbjct: 1262 IEKISYGHANYINNKIKLDEKFGYLIGAFLSEGH 1295
>ZFP14_MOUSE (P10755) Zinc finger protein 14 (Zfp-14) (Krox-9 protein)| Length = 501 Score = 27.7 bits (60), Expect = 8.1 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%) Frame = +3 Query: 21 FIRVRTITQSKRVHTGESGTYPQGPKLERVLGVHIRRSVH-INMRDIHYFLKSYELQ--- 188 FIR T++Q R+HTGE P + G R+ H I +H K YE + Sbjct: 149 FIRRSTLSQHLRIHTGEK------PYKCKECGQPFRQRAHLIRHHKLHTGEKPYECKDCG 202 Query: 189 ------QEYIPEGKKHTG 224 QE + HTG Sbjct: 203 KAFTVLQELTQHQRLHTG 220
>S22A4_RAT (Q9R141) Organic cation/carnitine transporter 1 (Solute carrier| family 22 member 4) Length = 553 Score = 27.7 bits (60), Expect = 8.1 Identities = 17/59 (28%), Positives = 29/59 (49%) Frame = -3 Query: 242 LQVFAKTGVFFTLRNVLLLKLVGFEEIMNVPHVYVNGTTDMYPQNSLQFWSLWICT*FA 66 +Q+F+ FT+ L +VG +I N ++ GT + + F +L +CT FA Sbjct: 186 VQIFSTNWEMFTV----LFAIVGMGQISNYVVAFILGTEILSKSVRILFSTLGVCTFFA 240
>ZFP14_HUMAN (Q9HCL3) Zinc finger protein 14 homolog (Zfp-14)| Length = 533 Score = 27.7 bits (60), Expect = 8.1 Identities = 24/78 (30%), Positives = 32/78 (41%), Gaps = 10/78 (12%) Frame = +3 Query: 21 FIRVRTITQSKRVHTGESGTYPQGPKLERVLGVHIRRSVH-INMRDIHYFLKSYELQ--- 188 FIR T++Q R+HTGE P + G R+ H I +H K YE + Sbjct: 181 FIRRSTLSQHLRIHTGEK------PYKCKECGQAFRQRAHLIRHHKLHTGEKPYECKECG 234 Query: 189 ------QEYIPEGKKHTG 224 QE + HTG Sbjct: 235 KAFTVLQELTQHQRLHTG 252 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 45,372,094 Number of Sequences: 219361 Number of extensions: 953274 Number of successful extensions: 3346 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2948 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3338 length of database: 80,573,946 effective HSP length: 62 effective length of database: 66,973,564 effective search space used: 1607365536 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)