Clone Name | rbart50e07 |
---|---|
Clone Library Name | barley_pub |
>gb|AY335488.1| Oryza sativa (japonica cultivar-group) enolase (Eno1) mRNA, complete cds Length = 1659 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 1546 accaaaattggagcaagttt-gggggtacatatccg 1512
>gb|AC131375.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0015J03, complete sequence Length = 165933 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 58107 accaaaattggagcaagttt-gggggtacatatccg 58141
>gb|AC116603.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0015J03, complete sequence Length = 135940 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 1894 accaaaattggagcaagttt-gggggtacatatccg 1860
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 4290566 accaaaattggagcaagttt-gggggtacatatccg 4290600
>dbj|AK073662.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048K07, full insert sequence Length = 1651 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 1577 accaaaattggagcaagttt-gggggtacatatccg 1543
>gb|U09450.1|OSU09450 Oryza sativa enolase mRNA, complete cds Length = 1687 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Minus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 1608 accaaaattggagcaagttt-gggggtacatatccg 1574
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 48.1 bits (24), Expect = 0.014 Identities = 34/36 (94%), Gaps = 1/36 (2%) Strand = Plus / Plus Query: 92 accaaaattggagcgagttttgggggtacatatccg 127 |||||||||||||| ||||| ||||||||||||||| Sbjct: 4291387 accaaaattggagcaagttt-gggggtacatatccg 4291421
>emb|BX640780.1|HSM806865 Homo sapiens mRNA; cDNA DKFZp686M11210 (from clone DKFZp686M11210) Length = 3661 Score = 42.1 bits (21), Expect = 0.86 Identities = 21/21 (100%) Strand = Plus / Plus Query: 234 aacctggagcaggtccccctt 254 ||||||||||||||||||||| Sbjct: 590 aacctggagcaggtccccctt 610
>gb|U32305.2| Caenorhabditis elegans cosmid B0336, complete sequence Length = 40214 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 212 aaaacacaccggttttcgcaaaaa 235 ||||||||||||||| |||||||| Sbjct: 27773 aaaacacaccggtttccgcaaaaa 27750
>gb|AF016451.1| Caenorhabditis elegans cosmid C03A7, complete sequence Length = 41609 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 157 ttcattatttcctcaaatcc 176 |||||||||||||||||||| Sbjct: 18141 ttcattatttcctcaaatcc 18160
>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14 Length = 306050 Score = 40.1 bits (20), Expect = 3.4 Identities = 26/28 (92%) Strand = Plus / Plus Query: 166 tcctcaaatcctacgagcttcaacaaga 193 |||||||||||| |||||| |||||||| Sbjct: 276887 tcctcaaatccttcgagctgcaacaaga 276914
>emb|AL663065.9| Mouse DNA sequence from clone RP23-248G11 on chromosome 11 Contains a heterogeneous nuclear ribonucleoprotein pseudogene and a CpG island, complete sequence Length = 210386 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tcattatttcctcaaatcct 177 |||||||||||||||||||| Sbjct: 110586 tcattatttcctcaaatcct 110567
>gb|AF398588.1| Discoderus cordicollis wingless (wg) gene, partial cds Length = 504 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 ttttcgcaaaaacctggagcaggt 247 ||||||||||||||||||| |||| Sbjct: 340 ttttcgcaaaaacctggagaaggt 317
>gb|AC068912.29| Mus musculus strain 129/Sv chromosome 11 clone ct7-326n13, complete sequence Length = 195413 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 158 tcattatttcctcaaatcct 177 |||||||||||||||||||| Sbjct: 184295 tcattatttcctcaaatcct 184314 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,712,635 Number of Sequences: 3902068 Number of extensions: 1712635 Number of successful extensions: 27214 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 7 Number of HSP's that attempted gapping in prelim test: 27171 Number of HSP's gapped (non-prelim): 43 length of query: 262 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 240 effective length of database: 17,147,199,772 effective search space: 4115327945280 effective search space used: 4115327945280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)