Clone Name | rbart50e03 |
---|---|
Clone Library Name | barley_pub |
>MTMR7_PONPY (Q5R6F6) Myotubularin-related protein 7 (EC 3.1.3.-)| Length = 660 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 212 IPDHYWYLFCDCNLAYRVLCSYPVDM 135 +P+HYW L D N YRV SYP ++ Sbjct: 141 LPNHYWQL-SDVNRDYRVCDSYPTEL 165
>MTMR7_HUMAN (Q9Y216) Myotubularin-related protein 7 (EC 3.1.3.-)| Length = 660 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 212 IPDHYWYLFCDCNLAYRVLCSYPVDM 135 +P+HYW L D N YRV SYP ++ Sbjct: 141 LPNHYWQL-SDVNRDYRVCDSYPTEL 165
>MTMR7_MOUSE (Q9Z2C9) Myotubularin-related protein 7 (EC 3.1.3.-)| Length = 660 Score = 29.6 bits (65), Expect = 1.9 Identities = 13/26 (50%), Positives = 17/26 (65%) Frame = -3 Query: 212 IPDHYWYLFCDCNLAYRVLCSYPVDM 135 +PD+YW L D N YRV SYP ++ Sbjct: 141 LPDNYWQL-SDVNRDYRVCDSYPTEL 165
>BORL4_ARATH (Q9SUU1) Putative boron transporter-like protein 4| Length = 710 Score = 28.5 bits (62), Expect = 4.2 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 8/49 (16%) Frame = -1 Query: 346 RLVMPL--------HWTTMDMVAAHPPLLKNATSTTSLFISCLIMFDSC 224 RL +PL HWT + +A PPL A ++ I+ L FD C Sbjct: 282 RLELPLPWASESLYHWTVVKDMAKVPPLYILAAFIPAIMIAGLYFFDHC 330
>SYM_RHOBA (Q7URP3) Methionyl-tRNA synthetase (EC 6.1.1.10) (Methionine--tRNA| ligase) (MetRS) Length = 679 Score = 28.1 bits (61), Expect = 5.5 Identities = 11/38 (28%), Positives = 19/38 (50%) Frame = -3 Query: 209 PDHYWYLFCDCNLAYRVLCSYPVDMDKNNVIDVWWSTD 96 P +YWY++ D + Y D + ++ D WW +D Sbjct: 245 PGNYWYVWFDAPIGYIASTQQWCDANGEDLAD-WWKSD 281
>Y2300_METMA (Q8PUN2) UPF0173 metal-dependent hydrolase MM2300| Length = 230 Score = 27.3 bits (59), Expect = 9.4 Identities = 9/25 (36%), Positives = 16/25 (64%) Frame = -1 Query: 349 PRLVMPLHWTTMDMVAAHPPLLKNA 275 PR+V+P+H+ T D++ P + A Sbjct: 186 PRIVVPMHYNTFDVIRQDPEEFRKA 210
>Y1308_METAC (Q8TR74) UPF0173 metal-dependent hydrolase MA1308| Length = 230 Score = 27.3 bits (59), Expect = 9.4 Identities = 8/25 (32%), Positives = 17/25 (68%) Frame = -1 Query: 349 PRLVMPLHWTTMDMVAAHPPLLKNA 275 P++V+P+H+ T D++ P + + A Sbjct: 186 PQIVVPMHYNTFDVIKQDPEVFRKA 210 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,623,238 Number of Sequences: 219361 Number of extensions: 1127307 Number of successful extensions: 2693 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 2651 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2691 length of database: 80,573,946 effective HSP length: 95 effective length of database: 59,734,651 effective search space used: 1433631624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)