>gb|AC146297.3| Mus musculus BAC clone RP23-260F15 from chromosome 9, complete sequence
          Length = 176549

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 183    acaaaataagtaccaataatg 203
              |||||||||||||||||||||
Sbjct: 131641 acaaaataagtaccaataatg 131621

>gb|AC153132.4| Mus musculus BAC clone RP24-362N19 from chromosome 13, complete
             sequence
          Length = 178970

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    taaataatttgatgcaaacat 39
             |||||||||||||||||||||
Sbjct: 13320 taaataatttgatgcaaacat 13300

>gb|AC158115.2| Mus musculus BAC clone RP24-180C10 from chromosome 13, complete
             sequence
          Length = 176518

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    taaataatttgatgcaaacat 39
             |||||||||||||||||||||
Sbjct: 72101 taaataatttgatgcaaacat 72121

>gb|AC098823.3| Homo sapiens BAC clone RP11-420E18 from 2, complete sequence
          Length = 102117

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 243   aaacatgaaataaacaagcta 263
             |||||||||||||||||||||
Sbjct: 69334 aaacatgaaataaacaagcta 69354

>emb|AL831771.5| Mouse DNA sequence from clone RP23-336F13 on chromosome X, complete
              sequence
          Length = 207974

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 54     tcaagatgttattacagatca 74
              |||||||||||||||||||||
Sbjct: 165204 tcaagatgttattacagatca 165224

>emb|AL133316.5|CNS01DUR Human chromosome 14 DNA sequence Partial sequence from BAC C-2577N12 of
             library CalTech-D from chromosome 14 of Homo sapiens
             (Human), complete sequence
          Length = 158473

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 230   atcaaacataattaaacatgaaata 254
             ||||||||||||||||||| |||||
Sbjct: 30359 atcaaacataattaaacattaaata 30383

>emb|AL079307.7|CNS00M8N Human chromosome 14 DNA sequence BAC R-280K24 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 190519

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 240   attaaacatgaaataaacaag 260
             |||||||||||||||||||||
Sbjct: 34838 attaaacatgaaataaacaag 34818

>gb|AC134825.5| Mus musculus BAC clone RP24-456L17 from 9, complete sequence
          Length = 173663

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 183    acaaaataagtaccaataatg 203
              |||||||||||||||||||||
Sbjct: 165934 acaaaataagtaccaataatg 165954

>gb|AC140445.3| Mus musculus BAC clone RP23-61D2 from 13, complete sequence
          Length = 127017

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 19     taaataatttgatgcaaacat 39
              |||||||||||||||||||||
Sbjct: 103975 taaataatttgatgcaaacat 103995

>emb|AL132716.6|CNS01DTF Human chromosome 14 DNA sequence BAC R-1124A8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 155619

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 230   atcaaacataattaaacatgaaata 254
             ||||||||||||||||||| |||||
Sbjct: 43632 atcaaacataattaaacattaaata 43656

>gb|DQ141104.1| Drosophila ananassae Dscam gene, partial sequence
          Length = 57036

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 120  aacattgttcttatccatat 139
            ||||||||||||||||||||
Sbjct: 4075 aacattgttcttatccatat 4094

>gb|AC102168.9| Mus musculus chromosome 7, clone RP23-452N21, complete sequence
          Length = 171392

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     aacacatggctaaataattt 28
             ||||||||||||||||||||
Sbjct: 41614 aacacatggctaaataattt 41595

>gb|U53344.3| Caenorhabditis elegans cosmid T07H6, complete sequence
          Length = 32196

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 215   caataagcaacacgaatcaaacat 238
             |||||||||||||||| |||||||
Sbjct: 16178 caataagcaacacgaagcaaacat 16155

>gb|AC161821.4| Pan troglodytes BAC clone CH251-507E3 from chromosome 7, complete
             sequence
          Length = 211131

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   acaaaataagtaccaataat 202
             ||||||||||||||||||||
Sbjct: 19594 acaaaataagtaccaataat 19575

>gb|AC166561.2| Spironucleus vortens clone JGIBAWF-9C3, complete sequence
          Length = 35544

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 112   acatcaataacattgttctt 131
             ||||||||||||||||||||
Sbjct: 21392 acatcaataacattgttctt 21373

>emb|CR450690.7| Zebrafish DNA sequence from clone CH211-78C14 in linkage group 11,
             complete sequence
          Length = 163328

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    tggctaaataatttgatgca 34
             ||||||||||||||||||||
Sbjct: 82086 tggctaaataatttgatgca 82067

>gb|AC146255.2| Pan troglodytes BAC clone RP43-28B2 from 7, complete sequence
          Length = 163747

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   acaaaataagtaccaataat 202
             ||||||||||||||||||||
Sbjct: 15339 acaaaataagtaccaataat 15320

>gb|AC006155.2| Homo sapiens BAC clone RP11-263N12 from 7, complete sequence
          Length = 119996

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   acaaaataagtaccaataat 202
             ||||||||||||||||||||
Sbjct: 80209 acaaaataagtaccaataat 80190

>gb|AC034236.5| Homo sapiens chromosome 5 clone CTD-2287O16, complete sequence
          Length = 162384

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 241   ttaaacatgaaataaacaag 260
             ||||||||||||||||||||
Sbjct: 32348 ttaaacatgaaataaacaag 32367

>emb|AL135778.9| Human DNA sequence from clone RP1-119C5 on chromosome 6 Contains the 5'
             end of the BMP6 gene for bone morphogenetic protein 6 and
             a CpG island, complete sequence
          Length = 152786

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   ataattaaacatgaaataaa 256
             ||||||||||||||||||||
Sbjct: 15126 ataattaaacatgaaataaa 15107

>emb|BX897700.1| Bartonella quintana str. Toulouse, complete genome
          Length = 1581384

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 233     aaacataattaaacatgaaataaa 256
               |||||||||||||| |||||||||
Sbjct: 1182150 aaacataattaaacctgaaataaa 1182127

>emb|BX547996.10| Zebrafish DNA sequence from clone CH211-212H16 in linkage group 1,
              complete sequence
          Length = 213398

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 240    attaaacatgaaataaacaa 259
              ||||||||||||||||||||
Sbjct: 126506 attaaacatgaaataaacaa 126487

>ref|NM_076652.3| Caenorhabditis elegans T07H6.5 (T07H6.5) mRNA, complete cds
          Length = 1934

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 215  caataagcaacacgaatcaaacat 238
            |||||||||||||||| |||||||
Sbjct: 1176 caataagcaacacgaagcaaacat 1199

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 174      attacaatcacaaaataagt 193
                ||||||||||||||||||||
Sbjct: 19894847 attacaatcacaaaataagt 19894866

>gb|AC078820.28| Homo sapiens 12 BAC RP11-114H23 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 164812

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   caagatgttattacagatca 74
            ||||||||||||||||||||
Sbjct: 5499 caagatgttattacagatca 5518

>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0036M16
          Length = 158880

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   attacaatcacaaaataagt 193
             ||||||||||||||||||||
Sbjct: 59497 attacaatcacaaaataagt 59516

>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0650C03
          Length = 144337

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 174    attacaatcacaaaataagt 193
              ||||||||||||||||||||
Sbjct: 135006 attacaatcacaaaataagt 135025

>dbj|AB010000.1| Cavia porcellus gene for platelet activating factor  acetylhydrolase,
            partial cds and 5' upstream region
          Length = 7584

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 72   tcaccccaaatatagccaca 91
            ||||||||||||||||||||
Sbjct: 7156 tcaccccaaatatagccaca 7175

>emb|CR854929.8| Zebrafish DNA sequence from clone DKEY-14O4 in linkage group 10,
             complete sequence
          Length = 74434

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 183   acaaaataagtaccaataatggtc 206
             |||||||||||| |||||||||||
Sbjct: 49617 acaaaataagtaacaataatggtc 49640

>emb|Z82269.1|CEF52G2 Caenorhabditis elegans Cosmid F52G2, complete sequence
          Length = 39271

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   caaaataagtaccaataatg 203
             ||||||||||||||||||||
Sbjct: 29998 caaaataagtaccaataatg 30017

>emb|AJ298970.1|ACA298970 Apistogramma caetei mitochondrial partial D-loop, site GC #3
          Length = 365

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caaccatatccatggtggtc 323
           ||||||||||||||||||||
Sbjct: 74  caaccatatccatggtggtc 93

>emb|AJ298969.1|ACA298969 Apistogramma caetei mitochondrial partial D-loop, site GC #2
          Length = 365

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caaccatatccatggtggtc 323
           ||||||||||||||||||||
Sbjct: 74  caaccatatccatggtggtc 93

>emb|AJ298968.1|ACA298968 Apistogramma caetei mitochondrial partial D-loop, site GC #1
          Length = 365

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caaccatatccatggtggtc 323
           ||||||||||||||||||||
Sbjct: 74  caaccatatccatggtggtc 93

>gb|AC142266.3| Mus musculus BAC clone RP24-380K14 from 14, complete sequence
          Length = 185704

 Score = 40.1 bits (20), Expect = 4.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 171   aagattacaatcacaaaataagtaccaa 198
             |||| |||||| ||||||||||||||||
Sbjct: 87860 aagactacaataacaaaataagtaccaa 87887


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,914,643
Number of Sequences: 3902068
Number of extensions: 4914643
Number of successful extensions: 90999
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 90895
Number of HSP's gapped (non-prelim): 104
length of query: 361
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 339
effective length of database: 17,147,199,772
effective search space: 5812900722708
effective search space used: 5812900722708
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)