Clone Name | rbart50e01 |
---|---|
Clone Library Name | barley_pub |
>gb|U47144.3| Caenorhabditis elegans cosmid ZC53, complete sequence Length = 35061 Score = 38.2 bits (19), Expect = 1.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 30 gggggacaaattcccgggt 48 ||||||||||||||||||| Sbjct: 8569 gggggacaaattcccgggt 8587
>gb|U58734.2| Caenorhabditis elegans cosmid T27A10, complete sequence Length = 35114 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 845 aacccaactgaacttgaa 828
>gb|AC024137.1| Caenorhabditis elegans cosmid F59D8, complete sequence Length = 13797 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 9442 aacccaactgaacttgaa 9425 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 878 aacccaactgaacttgaa 861
>gb|U42835.1| Caenorhabditis elegans cosmid C04F6, complete sequence Length = 25083 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 10964 aacccaactgaacttgaa 10981
>emb|BX119320.11| Human DNA sequence from clone RP11-533O1 on chromosome 1, complete sequence Length = 68709 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 8 caactgaacttgaaatta 25 |||||||||||||||||| Sbjct: 14575 caactgaacttgaaatta 14592
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 9 aactgaacttgaaattac 26 |||||||||||||||||| Sbjct: 2771253 aactgaacttgaaattac 2771236
>gb|U64599.1| Caenorhabditis elegans cosmid F56B6, complete sequence Length = 41984 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 38077 aacccaactgaacttgaa 38060
>gb|AC093371.6| Genomic sequence for Mus musculus, clone RP23-36P10, complete sequence Length = 177872 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 3 caacccaactgaacttga 20 |||||||||||||||||| Sbjct: 84209 caacccaactgaacttga 84192
>ref|NM_076212.3| Caenorhabditis elegans VITellogenin structural genes (yolk protein genes) family member (vit-3) (vit-3) mRNA, complete cds Length = 4861 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 4162 aacccaactgaacttgaa 4179
>ref|NM_076211.2| Caenorhabditis elegans VITellogenin structural genes (yolk protein genes) family member (vit-4) (vit-4) mRNA, complete cds Length = 4842 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 4162 aacccaactgaacttgaa 4179
>ref|NM_076188.3| Caenorhabditis elegans VITellogenin structural genes (yolk protein genes) family member (vit-5) (vit-5) mRNA, complete cds Length = 4862 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 4162 aacccaactgaacttgaa 4179
>gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome Length = 164921 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 aactgaacttgaaattac 26 |||||||||||||||||| Sbjct: 98129 aactgaacttgaaattac 98146
>gb|AC006647.1|AC006647 Caenorhabditis elegans clone F59D8, complete sequence Length = 13797 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 9442 aacccaactgaacttgaa 9425 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Minus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 878 aacccaactgaacttgaa 861
>dbj|AP001708.1| Homo sapiens genomic DNA, chromosome 21q, section 52/105 Length = 340000 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 aactgaacttgaaattac 26 |||||||||||||||||| Sbjct: 249759 aactgaacttgaaattac 249776
>emb|X03044.1|CEVIT5G Caenorhabditis elegans vit-5 gene for vitellogenin Length = 5375 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 4 aacccaactgaacttgaa 21 |||||||||||||||||| Sbjct: 4549 aacccaactgaacttgaa 4566
>gb|M22540.1|RABIGKCGA Rabbit Ig kappa L chain (IVSK1B95) gene, partial cds Length = 1349 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 10 actgaacttgaaattacc 27 |||||||||||||||||| Sbjct: 131 actgaacttgaaattacc 148
>dbj|AP001069.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B382J1, SOD-AML region, complete sequence Length = 105567 Score = 36.2 bits (18), Expect = 6.6 Identities = 18/18 (100%) Strand = Plus / Plus Query: 9 aactgaacttgaaattac 26 |||||||||||||||||| Sbjct: 41704 aactgaacttgaaattac 41721 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 269,722 Number of Sequences: 3902068 Number of extensions: 269722 Number of successful extensions: 66097 Number of sequences better than 10.0: 17 Number of HSP's better than 10.0 without gapping: 17 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66053 Number of HSP's gapped (non-prelim): 44 length of query: 50 length of database: 17,233,045,268 effective HSP length: 20 effective length of query: 30 effective length of database: 17,155,003,908 effective search space: 514650117240 effective search space used: 514650117240 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)