Clone Name | rbart50d10 |
---|---|
Clone Library Name | barley_pub |
>MTG8R_XENLA (Q9IAB2) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 586 Score = 31.2 bits (69), Expect = 0.71 Identities = 13/29 (44%), Positives = 18/29 (62%) Frame = -3 Query: 177 EEDTAPSETHVNKLCIIIVAPRRQPVIPL 91 E +TAP+E V ++C I APR P + L Sbjct: 233 ERETAPAEPPVKRVCTISPAPRHSPALSL 261
>FGF10_HUMAN (O15520) Fibroblast growth factor 10 precursor (FGF-10)| (Keratinocyte growth factor 2) Length = 208 Score = 29.3 bits (64), Expect = 2.7 Identities = 8/8 (100%), Positives = 8/8 (100%) Frame = +3 Query: 192 PGCCCCCF 215 PGCCCCCF Sbjct: 17 PGCCCCCF 24
>ARGD_CAUCR (Q9A652) Acetylornithine aminotransferase (EC 2.6.1.11) (ACOAT)| Length = 405 Score = 28.9 bits (63), Expect = 3.5 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = +2 Query: 29 ASSSPAGGGYPISEC-KNNEAVRGMTGCLRGAT 124 A + GGG+PI C EA +GMT G+T Sbjct: 251 AVAKALGGGFPIGACLATTEAAKGMTVAAHGST 283
>EI2BE_RABIT (P47823) Translation initiation factor eIF-2B epsilon subunit| (eIF-2B GDP-GTP exchange factor) Length = 721 Score = 27.7 bits (60), Expect = 7.8 Identities = 20/96 (20%), Positives = 37/96 (38%), Gaps = 13/96 (13%) Frame = +2 Query: 2 SHYQTNIYRASSSPAGGGYPISE-------------CKNNEAVRGMTGCLRGATMIIHNL 142 +H + NIYR G G + E C +V G GC G +++ Sbjct: 336 THSRHNIYRGPEVSLGHGSILEENVLLGSGTVIGSNCSITNSVIG-PGCCIGDNVVLDRA 394 Query: 143 FTWVSLGAVSSSLVRQTGXXXXXXRQDDVSMEVHLV 250 + W + S + + Q+ ++ V+++ H V Sbjct: 395 YLWKGVQVASGAQIHQSLLCDHAEVKEQVTLKPHCV 430
>MTG8R_MOUSE (O70374) Protein CBFA2T2 (MTG8-like protein) (MTG8-related protein| 1) Length = 574 Score = 27.7 bits (60), Expect = 7.8 Identities = 11/27 (40%), Positives = 14/27 (51%) Frame = -3 Query: 177 EEDTAPSETHVNKLCIIIVAPRRQPVI 97 E DT P E ++C I APR P + Sbjct: 218 ERDTVPPEPPAKRVCTISPAPRHSPAL 244
>NIKB_ECOLI (P33591) Nickel transport system permease protein nikB (EC| 3.6.3.24) Length = 314 Score = 27.7 bits (60), Expect = 7.8 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = +2 Query: 104 GCLRGATMIIHNLFTWVSLGAVSSSLV 184 G L G TMII N+F W +G + S + Sbjct: 243 GELIGGTMIIENIFAWPGVGRYAVSAI 269 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 43,776,873 Number of Sequences: 219361 Number of extensions: 747706 Number of successful extensions: 2151 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 2070 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2135 length of database: 80,573,946 effective HSP length: 72 effective length of database: 64,779,954 effective search space used: 1554718896 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)