>UL52_EBV (P03193) Helicase/primase complex protein (Probable DNA replication|
           protein BSLF1)
          Length = 874

 Score = 30.8 bits (68), Expect = 0.88
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -3

Query: 243 SKHVRTYVRRRTALAMHITHANVRTRMEHLLFFRWIGSP 127
           ++H+RTY  R T LA H+    ++ RME    + W   P
Sbjct: 312 AEHMRTYFTRETYLAEHVRVQQLKIRMEPPAPYTWDPDP 350

>IFRD1_MOUSE (P19182) Interferon-related developmental regulator 1 (Nerve growth|
           factor-inducible protein PC4) (TPA-induced sequence 7)
           (TIS7 protein)
          Length = 449

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 11/40 (27%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
 Frame = +2

Query: 188 VICM-ASAVRRRTYVRTCLLLCSYLDTGERPQIHNNLKCF 304
           +IC  A++++ R    TC  +C ++ T +  ++++ L+CF
Sbjct: 174 IICDGAASIQARQTCATCFGVCCFIATDDITELYSTLECF 213

>NUOA_BUCBP (Q89AU6) NADH-quinone oxidoreductase chain A (EC 1.6.99.5) (NADH|
           dehydrogenase I, chain A) (NDH-1, chain A)
          Length = 132

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 104 WGFLAFFFVVIKTCVIMIML 45
           W F  FFF+ +  CV M+ +
Sbjct: 12  WAFFTFFFIAVSICVFMLSI 31

>RNAS1_MICNV (Q9WUV3) Ribonuclease pancreatic precursor (EC 3.1.27.5) (RNase 1)|
           (RNase A)
          Length = 148

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/48 (29%), Positives = 22/48 (45%)
 Frame = -1

Query: 260 QGSCTKVSTYVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLLTVC 117
           QG C  V+T+V     A+H  C  +  T  +  + CY    +  +T C
Sbjct: 61  QGYCKPVNTFVHEPQTAVHAVCSQKNVTCKNGNSNCYKSHSALHITDC 108

>MATK_THUDO (Q9MSS0) Maturase K (Intron maturase)|
          Length = 509

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
 Frame = -3

Query: 225 YVR--RRTALAMHITHANVRTRMEHLL-----FFRWIGSPHRMCTFYVGLSCFFFCG 76
           YVR   R+ +A+  TH  V+    HL      FF     P+R+C+  +  + F F G
Sbjct: 275 YVRYGERSLIALKGTHLQVKKCRYHLFHFWQYFFHLWFQPYRICSLELSKTSFSFLG 331

>MATK_PSEMZ (Q9MV48) Maturase K (Intron maturase)|
          Length = 515

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 8/53 (15%)
 Frame = -3

Query: 225 YVR--RRTALAMHITHANVRTRMEHLLFFR------WIGSPHRMCTFYVGLSC 91
           YVR   R+ +A+  TH  V+    HLL FR      W   P+R+C+  +  +C
Sbjct: 274 YVRYGERSIIAIKGTHLLVKKCRYHLLIFRQCYFHLWF-EPYRVCSHQLSKNC 325

>CLK1_HUMAN (P49759) Dual specificity protein kinase CLK1 (EC 2.7.12.1)|
           (CDC-like kinase 1)
          Length = 484

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 20/73 (27%), Positives = 31/73 (42%)
 Frame = -1

Query: 305 ENILSYCEFVVALPCQGSCTKVSTYVRTYDDALHLPCISRMQTYVHAWNICYSFDGSGLL 126
           +N+  YCE         S  +V  ++ T D      C+  ++ + H  +IC  F+  GL 
Sbjct: 194 KNVDRYCE------AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLS 247

Query: 125 TVCVHFTWGFLAF 87
           T       GFL F
Sbjct: 248 TYDFIKENGFLPF 260


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,607,964
Number of Sequences: 219361
Number of extensions: 913651
Number of successful extensions: 2091
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2018
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2085
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)