ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50d05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|CR457456.7| Zebrafish DNA sequence from clone CH211-235F6 in... 44 0.34
2emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chr... 42 1.4
3gb|AC153799.1| Mus musculus BAC RP23-145M15 (Roswell Park Cance... 40 5.4
4gb|AC169121.3| Mus musculus chromosome 3, clone wi1-1639I9, comp... 40 5.4
5gb|AC107752.8| Mus musculus chromosome 10, clone RP23-244J13, co... 40 5.4
6gb|AC163272.6| Mus musculus chromosome 3, clone RP24-388P8, comp... 40 5.4
7gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Canc... 40 5.4
8gb|AC102508.9| Mus musculus chromosome 3, clone RP24-220M17, com... 40 5.4
9gb|AC166913.3| Mus musculus chromosome 3, clone wi1-1667I10, com... 40 5.4
10gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, co... 40 5.4
11gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosom... 40 5.4
12gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, co... 40 5.4
13gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosom... 40 5.4
14gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, com... 40 5.4
15gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, com... 40 5.4
16gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, comp... 40 5.4
17gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Can... 40 5.4
18gb|AC166040.3| Mus musculus 6 BAC RP24-538P5 (Roswell Park Cance... 40 5.4
19gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, compl... 40 5.4
20emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chro... 40 5.4
21emb|CT025157.6| Mouse DNA sequence from clone RP23-292D13 on chr... 40 5.4
22emb|CR936849.22| Mouse DNA sequence from clone DN-250A21 on chro... 40 5.4
23gb|AC124543.4| Mus musculus BAC clone RP23-264A21 from chromosom... 40 5.4
24gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, comple... 40 5.4
25gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, comple... 40 5.4
26gb|AC125182.3| Mus musculus BAC clone RP23-293D23 from 15, compl... 40 5.4
27gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, comple... 40 5.4
28gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, comple... 40 5.4
29gb|AC096785.29| Mus musculus strain C57BL/6J clone rp23-382i2 ma... 40 5.4
30gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, com... 40 5.4
31gb|AC131602.4| Rattus norvegicus 2 BAC CH230-33J10 (Children's H... 40 5.4
32gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, com... 40 5.4
33emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chr... 40 5.4
34emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chro... 40 5.4
35gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Can... 40 5.4
36emb|AL645751.12| Mouse DNA sequence from clone RP23-396K15 on ch... 40 5.4
37gb|AC158973.3| Mus musculus chromosome 15, clone RP24-236A19, co... 40 5.4
38gb|AC142249.6| Mus musculus chromosome 19, clone RP23-388O22, co... 40 5.4
39emb|AL645667.14| Mouse DNA sequence from clone RP23-316N16 on ch... 40 5.4
40emb|AL590616.23| Mouse DNA sequence from clone RP23-231P12 on ch... 40 5.4
41gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, com... 40 5.4
42gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, com... 40 5.4
43gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, com... 40 5.4
44emb|AL844596.5| Mouse DNA sequence from clone RP23-35J22 on chro... 40 5.4
45gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosom... 40 5.4
46gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosom... 40 5.4
47gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, comple... 40 5.4
48gb|AC154599.2| Mus musculus BAC clone RP23-250J9 from chromosome... 40 5.4
49gb|AC101819.10| Mus musculus chromosome 15, clone RP24-375C3, co... 40 5.4
50gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, c... 40 5.4
51gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, com... 40 5.4
52gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, com... 40 5.4
53gb|AC155913.5| Mus musculus 6 BAC RP24-402E22 (Roswell Park Canc... 40 5.4
54emb|AL833782.13| Mouse DNA sequence from clone RP23-83L24 on chr... 40 5.4
55gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete... 40 5.4
56gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complet... 40 5.4
57emb|BX119988.9| Zebrafish DNA sequence from clone CH211-184L6 in... 40 5.4
58emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on ch... 40 5.4
59gb|AC110551.9| Mus musculus chromosome 7, clone RP23-245P16, com... 40 5.4
60emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on ch... 40 5.4
61emb|BX004855.10| Mouse DNA sequence from clone RP23-216P21 on ch... 40 5.4
62gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Can... 40 5.4
63gb|AC173114.3| Mus musculus BAC clone RP23-25G5 from chromosome ... 40 5.4
64emb|BX119961.9| Mouse DNA sequence from clone RP23-444M11 on chr... 40 5.4
65emb|AL772277.13| Mouse DNA sequence from clone RP23-416H4 on chr... 40 5.4
66gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, compl... 40 5.4
67gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, comple... 40 5.4
68gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complet... 40 5.4
69emb|BX957229.8| Zebrafish DNA sequence from clone DKEY-205F6 in ... 40 5.4
70emb|AL845310.4| Mouse DNA sequence from clone RP23-64M1 on chrom... 40 5.4
71gb|AC170901.3| Mus musculus BAC clone RP23-318L14 from chromosom... 40 5.4
72gb|AC169983.2| Mus musculus BAC clone RP23-401A24 from chromosom... 40 5.4
73gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosom... 40 5.4
74gb|AC161604.6| Mus musculus BAC clone RP23-245O13 from chromosom... 40 5.4
75emb|AL672098.13| Mouse DNA sequence from clone RP23-322M6 on chr... 40 5.4
76emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chro... 40 5.4
77emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chro... 40 5.4
78emb|AL928539.4| Mouse DNA sequence from clone RP23-152D24 on chr... 40 5.4
79emb|AL833792.10| Mouse DNA sequence from clone RP23-97B23 on chr... 40 5.4
80gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome ... 40 5.4 
>emb|CR457456.7| Zebrafish DNA sequence from clone CH211-235F6 in linkage group 23,
             complete sequence
          Length = 146468

 Score = 44.1 bits (22), Expect = 0.34
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 18    agtttaggttaatactgtacaatact 43
             ||||||| ||||||||||||||||||
Sbjct: 16337 agtttagattaatactgtacaatact 16312
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>emb|AL772203.14| Mouse DNA sequence from clone RP23-398I1 on chromosome 4, complete
              sequence
          Length = 157996

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 67     atcaaagtgctagctagaaca 87
              |||||||||||||||||||||
Sbjct: 148554 atcaaagtgctagctagaaca 148574
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>gb|AC153799.1| Mus musculus  BAC RP23-145M15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 207598

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 58639 tcaaagtgctagctagaaca 58620
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>gb|AC169121.3| Mus musculus chromosome 3, clone wi1-1639I9, complete sequence
          Length = 36597

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 10009 tcaaagtgctagctagaaca 9990
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>gb|AC107752.8| Mus musculus chromosome 10, clone RP23-244J13, complete sequence
          Length = 208458

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 40632 tcaaagtgctagctagaaca 40651
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>gb|AC163272.6| Mus musculus chromosome 3, clone RP24-388P8, complete sequence
          Length = 143565

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 43396 tcaaagtgctagctagaaca 43377
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>gb|AC153558.7| Mus musculus 10 BAC RP23-367D2 (Roswell Park Cancer Institute
            (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 207823

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tcaaagtgctagctagaaca 87
            ||||||||||||||||||||
Sbjct: 6088 tcaaagtgctagctagaaca 6107
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>gb|AC102508.9| Mus musculus chromosome 3, clone RP24-220M17, complete sequence
          Length = 182322

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 68  tcaaagtgctagctagaaca 87
           ||||||||||||||||||||
Sbjct: 376 tcaaagtgctagctagaaca 357
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>gb|AC166913.3| Mus musculus chromosome 3, clone wi1-1667I10, complete sequence
          Length = 39719

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 30916 tcaaagtgctagctagaaca 30897
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>gb|AC139883.8| Mus musculus chromosome 16, clone RP24-304O16, complete sequence
          Length = 138043

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tcaaagtgctagctagaaca 87
            ||||||||||||||||||||
Sbjct: 6878 tcaaagtgctagctagaaca 6897
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>gb|AC134553.5| Mus musculus BAC clone RP24-280H19 from chromosome 12, complete
            sequence
          Length = 168895

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  aatgaggcacggtgcaaaat 204
            ||||||||||||||||||||
Sbjct: 1509 aatgaggcacggtgcaaaat 1528
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>gb|AC140799.6| Mus musculus chromosome 15, clone RP24-147N23, complete sequence
          Length = 162329

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 138292 tcaaagtgctagctagaaca 138273
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>gb|AC147990.3| Mus musculus BAC clone RP24-396B13 from chromosome 17, complete
             sequence
          Length = 145085

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 60255 tcaaagtgctagctagaaca 60274
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>gb|AC158949.6| Mus musculus chromosome 7, clone RP23-305I23, complete sequence
          Length = 159999

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 35342 tcaaagtgctagctagaaca 35361
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>gb|AC101714.10| Mus musculus chromosome 8, clone RP23-283I2, complete sequence
          Length = 157233

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 150155 tcaaagtgctagctagaaca 150136
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>gb|AC091278.6| Mus musculus chromosome 1, clone RP23-294D6, complete sequence
          Length = 244656

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 235683 tcaaagtgctagctagaaca 235664
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>gb|AC166178.10| Mus musculus 6 BAC RP24-414G20 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 173015

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 60    atatactatcaaagtgctagctagaaca 87
             ||||| ||||||||| ||||||||||||
Sbjct: 22421 atatagtatcaaagttctagctagaaca 22448
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>gb|AC166040.3| Mus musculus 6 BAC RP24-538P5 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 200847

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 60   atatactatcaaagtgctagctagaaca 87
            ||||| ||||||||| ||||||||||||
Sbjct: 8477 atatagtatcaaagttctagctagaaca 8450
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>gb|AC099863.14| Mus musculus chromosome 3, clone RP23-6F2, complete sequence
          Length = 245784

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 43708 tcaaagtgctagctagaaca 43689
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>emb|CT025708.8| Mouse DNA sequence from clone RP24-331C1 on chromosome 17, complete
              sequence
          Length = 205598

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 140051 tcaaagtgctagctagaaca 140032
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>emb|CT025157.6| Mouse DNA sequence from clone RP23-292D13 on chromosome 14, complete
            sequence
          Length = 179561

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tcaaagtgctagctagaaca 87
            ||||||||||||||||||||
Sbjct: 3625 tcaaagtgctagctagaaca 3644
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>emb|CR936849.22| Mouse DNA sequence from clone DN-250A21 on chromosome 3, complete
             sequence
          Length = 153083

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 14440 tcaaagtgctagctagaaca 14421
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>gb|AC124543.4| Mus musculus BAC clone RP23-264A21 from chromosome 15, complete sequence
          Length = 224760

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 168259 tcaaagtgctagctagaaca 168278
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>gb|AC125405.4| Mus musculus BAC clone RP23-29M17 from 14, complete sequence
          Length = 190653

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 91968 tcaaagtgctagctagaaca 91987
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>gb|AC129337.4| Mus musculus BAC clone RP23-123I14 from 1, complete sequence
          Length = 184705

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 52429 tcaaagtgctagctagaaca 52448
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>gb|AC125182.3| Mus musculus BAC clone RP23-293D23 from 15, complete sequence
          Length = 169841

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 121729 tcaaagtgctagctagaaca 121710
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>gb|AC121864.1| Mus musculus BAC clone RP24-111L8 from 17, complete sequence
          Length = 194372

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tcaaagtgctagctagaaca 87
            ||||||||||||||||||||
Sbjct: 6677 tcaaagtgctagctagaaca 6696
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>gb|AC122802.2| Mus musculus BAC clone RP24-136N24 from 6, complete sequence
          Length = 185938

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 171781 tcaaagtgctagctagaaca 171762
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>gb|AC096785.29| Mus musculus strain C57BL/6J clone rp23-382i2 map 18, complete sequence
          Length = 201304

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 179828 tcaaagtgctagctagaaca 179847
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>gb|AC157766.4| Mus musculus chromosome 1, clone RP24-318F24, complete sequence
          Length = 145303

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 130188 tcaaagtgctagctagaaca 130207
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>gb|AC131602.4| Rattus norvegicus 2 BAC CH230-33J10 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216155

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 138815 tcaaagtgctagctagaaca 138796
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>gb|AC162794.4| Mus musculus chromosome 3, clone RP24-120B22, complete sequence
          Length = 139773

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 34663 tcaaagtgctagctagaaca 34682
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>emb|AL645739.9| Mouse DNA sequence from clone RP23-213I10 on chromosome 11 Contains the
              Trpv3 gene for transient receptor potential cation channel
              subfamily V member 3, the Aspa gene for aspartoacylase
              (aminoacylase) 2, a novel gene, the genes for olfactory
              receptor MOR135-11, 12, 13, 2, 1, three olfactory receptor
              MOR135 pseudogenes and a CpG island, complete sequence
          Length = 208137

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 114722 tcaaagtgctagctagaaca 114703
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>emb|AL589701.9| Mouse DNA sequence from clone RP23-202F3 on chromosome 13 Contains a
             novel gene and the 3' end of a novel gene (1190005B03Rik),
             complete sequence
          Length = 219200

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 27130 tcaaagtgctagctagaaca 27149
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>gb|AC157019.8| Mus musculus 10 BAC RP24-377N13 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 233155

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 22719 tcaaagtgctagctagaaca 22738
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>emb|AL645751.12| Mouse DNA sequence from clone RP23-396K15 on chromosome 11 Contains the
             5' end of the Gabrg2 gene for gamma-aminobutyric acid
             (GABA-A) receptor, subunit gamma 2, the 3' end of the
             Gabra1 gene for gamma-aminobutyric acid (GABA-A) receptor,
             subunit alpha 1 and the 3' end of a novel gene, complete
             sequence
          Length = 186884

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 95884 tcaaagtgctagctagaaca 95865
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>gb|AC158973.3| Mus musculus chromosome 15, clone RP24-236A19, complete sequence
          Length = 187091

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 47261 tcaaagtgctagctagaaca 47280
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>gb|AC142249.6| Mus musculus chromosome 19, clone RP23-388O22, complete sequence
          Length = 201321

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 166249 tcaaagtgctagctagaaca 166230
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>emb|AL645667.14| Mouse DNA sequence from clone RP23-316N16 on chromosome 13 contains the
             vomeronasal receptor 1 H1 pseudogene V1rh1, the V1rh3,
             V1ri4, V1ri7 and V1rh11 genes for vomeronasal receptors 1
             H3, I4, I7 and H11, three vomeronasal receptors 1 H
             pseudogenes, a vomeronasal receptor 1 I pseudogene,  an
             ABC transporter pseudogene, the gene for a novel
             vomeronasal receptor 1, I family member, a novel gene and
             two CpG islands, complete sequence
          Length = 179902

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 43670 tcaaagtgctagctagaaca 43689
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>emb|AL590616.23| Mouse DNA sequence from clone RP23-231P12 on chromosome 13 Contains the
              gene for prolactin-like protein L and the Prlpa gene for
              prolactin-like protein A, complete sequence
          Length = 202629

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 142902 tcaaagtgctagctagaaca 142921
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>gb|AC157607.4| Mus musculus chromosome 1, clone RP23-401G11, complete sequence
          Length = 200421

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 74649 tcaaagtgctagctagaaca 74630
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>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence
          Length = 131548

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 199    caaaatcaatagcaaatcct 218
              ||||||||||||||||||||
Sbjct: 130842 caaaatcaatagcaaatcct 130861
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>gb|AC087633.5| Homo sapiens chromosome 15, clone RP11-255M2, complete sequence
          Length = 179163

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 199   caaaatcaatagcaaatcct 218
             ||||||||||||||||||||
Sbjct: 18073 caaaatcaatagcaaatcct 18092
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>emb|AL844596.5| Mouse DNA sequence from clone RP23-35J22 on chromosome 2, complete
             sequence
          Length = 128775

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 63985 tcaaagtgctagctagaaca 64004
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>gb|AC157655.2| Mus musculus BAC clone RP23-462E18 from chromosome 8, complete sequence
          Length = 170167

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 72026 tcaaagtgctagctagaaca 72007
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>gb|AC159808.2| Mus musculus BAC clone RP24-357G23 from chromosome 12, complete sequence
          Length = 155139

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 145752 tcaaagtgctagctagaaca 145733
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>gb|AC073485.3| Homo sapiens BAC clone RP11-798J16 from 2, complete sequence
          Length = 140811

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 214   atcctgtcatgagggagaaa 233
             ||||||||||||||||||||
Sbjct: 19425 atcctgtcatgagggagaaa 19444
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>gb|AC154599.2| Mus musculus BAC clone RP23-250J9 from chromosome 17, complete sequence
          Length = 141431

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 64817 tcaaagtgctagctagaaca 64798
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>gb|AC101819.10| Mus musculus chromosome 15, clone RP24-375C3, complete sequence
          Length = 131280

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 119849 tcaaagtgctagctagaaca 119830
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>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence
          Length = 162101

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 199 caaaatcaatagcaaatcct 218
           ||||||||||||||||||||
Sbjct: 707 caaaatcaatagcaaatcct 688
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>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence
          Length = 159371

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 55975 tcaaagtgctagctagaaca 55956
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>gb|AC109146.26| Mus musculus chromosome 8, clone RP23-54G23, complete sequence
          Length = 197868

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 17633 tcaaagtgctagctagaaca 17614
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>gb|AC155913.5| Mus musculus 6 BAC RP24-402E22 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 162332

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 43123 tcaaagtgctagctagaaca 43142
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>emb|AL833782.13| Mouse DNA sequence from clone RP23-83L24 on chromosome X, complete
            sequence
          Length = 198249

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tcaaagtgctagctagaaca 87
            ||||||||||||||||||||
Sbjct: 1212 tcaaagtgctagctagaaca 1231
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>gb|AC134622.3| Mus musculus BAC clone RP23-13I7 from 6, complete sequence
          Length = 203072

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 196146 tcaaagtgctagctagaaca 196165
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>gb|AC127225.5| Mus musculus BAC clone RP24-499N1 from 3, complete sequence
          Length = 190949

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 51590 tcaaagtgctagctagaaca 51609
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>emb|BX119988.9| Zebrafish DNA sequence from clone CH211-184L6 in linkage group 18,
              complete sequence
          Length = 141930

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 5      agaaagtcataaaagtttag 24
              ||||||||||||||||||||
Sbjct: 141397 agaaagtcataaaagtttag 141416
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>emb|CT009742.12| Mouse DNA sequence from clone RP23-306D19 on chromosome 12, complete
              sequence
          Length = 163039

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 100961 tcaaagtgctagctagaaca 100942
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>gb|AC110551.9| Mus musculus chromosome 7, clone RP23-245P16, complete sequence
          Length = 155691

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 87502 tcaaagtgctagctagaaca 87521
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>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete
              sequence
          Length = 203615

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 153712 tcaaagtgctagctagaaca 153731
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>emb|BX004855.10| Mouse DNA sequence from clone RP23-216P21 on chromosome X, complete
             sequence
          Length = 64417

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 63629 tcaaagtgctagctagaaca 63648
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>gb|AC153561.5| Mus musculus 10 BAC RP23-426E11 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 228734

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 154735 tcaaagtgctagctagaaca 154754
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>gb|AC173114.3| Mus musculus BAC clone RP23-25G5 from chromosome 3, complete sequence
          Length = 203104

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 168736 tcaaagtgctagctagaaca 168717
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>emb|BX119961.9| Mouse DNA sequence from clone RP23-444M11 on chromosome X, complete
             sequence
          Length = 76072

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 67837 tcaaagtgctagctagaaca 67818
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>emb|AL772277.13| Mouse DNA sequence from clone RP23-416H4 on chromosome 4, complete
             sequence
          Length = 167123

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 56552 tcaaagtgctagctagaaca 56571
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>gb|AC142263.3| Mus musculus BAC clone RP24-449M10 from 12, complete sequence
          Length = 182060

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 118423 tcaaagtgctagctagaaca 118404
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>gb|AC138027.3| Mus musculus BAC clone RP24-100L8 from 12, complete sequence
          Length = 201839

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 82069 tcaaagtgctagctagaaca 82088
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>gb|AC126801.5| Mus musculus BAC clone RP24-511J6 from 8, complete sequence
          Length = 157089

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 18535 tcaaagtgctagctagaaca 18516
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>emb|BX957229.8| Zebrafish DNA sequence from clone DKEY-205F6 in linkage group 18,
            complete sequence
          Length = 3994

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 5    agaaagtcataaaagtttag 24
            ||||||||||||||||||||
Sbjct: 2528 agaaagtcataaaagtttag 2509
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>emb|AL845310.4| Mouse DNA sequence from clone RP23-64M1 on chromosome 3, complete
             sequence
          Length = 122356

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 77599 tcaaagtgctagctagaaca 77580
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>gb|AC170901.3| Mus musculus BAC clone RP23-318L14 from chromosome 17, complete sequence
          Length = 207623

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 155785 tcaaagtgctagctagaaca 155804
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>gb|AC169983.2| Mus musculus BAC clone RP23-401A24 from chromosome 3, complete sequence
          Length = 193953

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 153517 tcaaagtgctagctagaaca 153536
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>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete
             sequence
          Length = 177627

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 60560 tcaaagtgctagctagaaca 60579
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>gb|AC161604.6| Mus musculus BAC clone RP23-245O13 from chromosome 3, complete sequence
          Length = 210802

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 168504 tcaaagtgctagctagaaca 168523
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>emb|AL672098.13| Mouse DNA sequence from clone RP23-322M6 on chromosome X, complete
             sequence
          Length = 191655

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 65814 tcaaagtgctagctagaaca 65795
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>emb|AL672003.6| Mouse DNA sequence from clone RP23-285G5 on chromosome X, complete
             sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    tcaaagtgctagctagaaca 87
             ||||||||||||||||||||
Sbjct: 48403 tcaaagtgctagctagaaca 48384
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>emb|AL669851.8| Mouse DNA sequence from clone RP23-18K13 on chromosome X, complete
              sequence
          Length = 204557

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 120797 tcaaagtgctagctagaaca 120778
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>emb|AL928539.4| Mouse DNA sequence from clone RP23-152D24 on chromosome X, complete
              sequence
          Length = 165789

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 158706 tcaaagtgctagctagaaca 158687
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>emb|AL833792.10| Mouse DNA sequence from clone RP23-97B23 on chromosome X, complete
              sequence
          Length = 225818

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 68     tcaaagtgctagctagaaca 87
              ||||||||||||||||||||
Sbjct: 173030 tcaaagtgctagctagaaca 173011
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>gb|AC151981.3| Mus musculus BAC clone RP24-66K3 from chromosome 12, complete sequence
          Length = 185710

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   aatgaggcacggtgcaaaat 204
             ||||||||||||||||||||
Sbjct: 80460 aatgaggcacggtgcaaaat 80441


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,313,967
Number of Sequences: 3902068
Number of extensions: 3313967
Number of successful extensions: 57273
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 57149
Number of HSP's gapped (non-prelim): 124
length of query: 402
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 380
effective length of database: 17,147,199,772
effective search space: 6515935913360
effective search space used: 6515935913360
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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