Clone Name | rbart50d03 |
---|---|
Clone Library Name | barley_pub |
>FABI_BRANA (P80030) Enoyl-[acyl-carrier-protein] reductase [NADH], chloroplast| precursor (EC 1.3.1.9) (NADH-dependent enoyl-ACP reductase) Length = 385 Score = 45.1 bits (105), Expect = 4e-05 Identities = 19/28 (67%), Positives = 24/28 (85%) Frame = -2 Query: 377 AITGSTVYVDNGLNTMGLAVDSPTVSSL 294 AITG+T+YVDNGLN+MG+A+DSP L Sbjct: 356 AITGATIYVDNGLNSMGVALDSPVFKDL 383
>PYRH_CHLTR (O84685) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 28.9 bits (63), Expect = 3.2 Identities = 18/51 (35%), Positives = 23/51 (45%) Frame = +3 Query: 42 LLRRQSATLNTVSATTTFEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 194 L + QS +N VSA +ATL G L + + S SCPQL Sbjct: 62 LSQSQSLQINRVSADQMGMLATLINGMALADALKTEDVPNLLTSTLSCPQL 112
>FABI1_RHIME (P58380) Enoyl-[acyl-carrier-protein] reductase [NADH] 1 (EC| 1.3.1.9) (NADH-dependent enoyl-ACP reductase 1) Length = 272 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/28 (46%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = -2 Query: 374 ITGSTVYVDNGLNTMGL-AVDSPTVSSL 294 +TG +VD+G +T+G+ AVD+P +S L Sbjct: 243 VTGEVHHVDSGYHTVGMKAVDAPDISVL 270
>DRL42_ARATH (Q9FKZ1) Probable disease resistance protein At5g66900| Length = 809 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/45 (35%), Positives = 23/45 (51%) Frame = -3 Query: 172 EGMAVEIDLLSSPAPPLWPICNVAISNVVVADTVFSVADWRLNKL 38 +G++ +DLLS PAP +C+V D V DW L +L Sbjct: 139 DGLSKRMDLLSVPAPVFRDLCSVP-----KLDKVIVGLDWPLGEL 178
>LYAM3_SHEEP (P98109) P-selectin precursor (Granule membrane protein 140)| (GMP-140) (PADGEM) (Leukocyte-endothelial cell adhesion molecule 3) (LECAM3) (CD62P antigen) Length = 769 Score = 27.7 bits (60), Expect = 7.0 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = -3 Query: 325 LQLTAPRYLRCCDSGRWTYFPDSPRLDCV 239 L+L ++ C SGRWT P S ++D V Sbjct: 544 LKLEGSNHVECTASGRWTAPPPSCKVDTV 572
>PYRH_CHLMU (P71147) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate| kinase) (UMP kinase) Length = 245 Score = 27.7 bits (60), Expect = 7.0 Identities = 17/51 (33%), Positives = 23/51 (45%) Frame = +3 Query: 42 LLRRQSATLNTVSATTTFEIATLQMGQRGGAGLLKRSISTAIPSFFSCPQL 194 L + Q+ +N VSA +ATL G L + + S SCPQL Sbjct: 62 LSQSQNLQINRVSADQMGMLATLINGMALADALKTEDVPNLLTSTLSCPQL 112
>KC1_PLAYO (Q7RBX5) Casein kinase I (EC 2.7.11.1)| Length = 323 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 154 IDLLSSPAPPLWPICNVAISNVVVADTVFSVADWRLNKLCYIYIRNRVY 8 +DLL L+ +CN S TV AD LN++ Y++ +N ++ Sbjct: 82 LDLLGPSLEDLFTLCNRKFS----LKTVLMTADQMLNRIEYVHSKNFIH 126
>KC1_PLAF7 (Q8IHZ9) Casein kinase I (EC 2.7.11.1)| Length = 323 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/49 (30%), Positives = 25/49 (51%) Frame = -3 Query: 154 IDLLSSPAPPLWPICNVAISNVVVADTVFSVADWRLNKLCYIYIRNRVY 8 +DLL L+ +CN S TV AD LN++ Y++ +N ++ Sbjct: 82 LDLLGPSLEDLFTLCNRKFS----LKTVLMTADQMLNRIEYVHSKNFIH 126
>Y2081_MYCTU (Q10689) Hypothetical protein Rv2081c/MT2143| Length = 146 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 6/35 (17%) Frame = +3 Query: 51 RQSATLNTVSATTTFEIATL------QMGQRGGAG 137 R SAT+ + +TT IATL Q+ +RGGAG Sbjct: 56 RVSATIKAAAPSTTAAIATLATAANGQLRERGGAG 90
>K0056_HUMAN (P42695) Protein KIAA0056| Length = 1498 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = +3 Query: 276 HLPESQQRRYRGAVNCKTHGVKSIVDVNSRASD 374 HLP+S + + AV CK +G + ++V S A D Sbjct: 768 HLPKSTRDKVTDAVKCKLNGFQWSLEVISSAVD 800
>CYAA_PODAN (Q01513) Adenylate cyclase (EC 4.6.1.1) (ATP pyrophosphate-lyase)| (Adenylyl cyclase) Length = 2145 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/31 (41%), Positives = 16/31 (51%) Frame = +1 Query: 277 TYQNHNNEDTVGLSTARPMVLSPLST*TVEP 369 T+ H E L RP +LSP S +VEP Sbjct: 1999 THSKHEKEQAQDLREIRPAILSPGSELSVEP 2029 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,097,633 Number of Sequences: 219361 Number of extensions: 805961 Number of successful extensions: 1923 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 1854 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1922 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 1402043640 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)