>NAL13_HUMAN (Q86W25) NACHT-, LRR- and PYD-containing protein 13|
           (Nucleotide-binding oligomerization domain protein 14)
          Length = 1043

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 22/70 (31%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
 Frame = +2

Query: 119 HIWQE*TRYLVSTHNLHPESNTNKTR*LNA--G*ECRQKYSRNQPSKLTTKFTTPRWHIY 292
           H W      LV+  NLH    +N     ++  G     K  R +  KLT K  TP W + 
Sbjct: 713 HAWNSICSTLVTNENLHELDLSNSKLHASSVKGLCLALKNPRCKVQKLTCKSVTPEWVLQ 772

Query: 293 HLLDKKQQNS 322
            L+   Q NS
Sbjct: 773 DLIIALQGNS 782

>YR297_MIMIV (Q5UPY3) Hypothetical protein R297|
          Length = 168

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 10/36 (27%), Positives = 22/36 (61%)
 Frame = +2

Query: 224 QKYSRNQPSKLTTKFTTPRWHIYHLLDKKQQNSDFY 331
           ++Y+ NQP++L T+   P ++  +  + +  N +FY
Sbjct: 80  KQYNYNQPNRLQTRSVRPNYYSGYRYNNRTGNQEFY 115

>Y241_MYCGE (P47483) Hypothetical protein MG241|
          Length = 620

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 224 QKYSRNQPSKLTTKFTTPRWHIYHLLDKKQQ---NSDFYFSTQQ 346
           +KYS NQP KL+   T     +Y L  K++Q    +DF+F+  +
Sbjct: 322 EKYSTNQPQKLSLNST-----VYVLQTKQKQFFLKNDFFFNNNE 360

>HATB_ARATH (Q9FJT8) Histone acetyltransferase type B catalytic subunit (EC|
           2.3.1.48) (HAT B)
          Length = 467

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 269 TTPRWHIYHLLDKKQQNSD 325
           T P WH+Y L+ KK++  D
Sbjct: 203 TDPDWHLYLLIQKKEEKED 221

>KPCD_RAT (P09215) Protein kinase C delta type (EC 2.7.11.13) (nPKC-delta)|
          Length = 673

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 7/71 (9%)
 Frame = -2

Query: 353 VAAAE*KNRSRYFAASYL-------EDDICATWVS*TL*SVLMADFLSTSVDIPSQRSTI 195
           V  AE K + RYFA  YL       +DD+  T V   + ++   +   T +    Q    
Sbjct: 361 VLLAELKGKERYFAIKYLKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLICTFQTKDH 420

Query: 194 LFCSCYFLDGG 162
           LF    FL+GG
Sbjct: 421 LFFVMEFLNGG 431


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,238,176
Number of Sequences: 219361
Number of extensions: 862461
Number of successful extensions: 1656
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1640
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1656
length of database: 80,573,946
effective HSP length: 93
effective length of database: 60,173,373
effective search space used: 1444160952
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)