>gb|AF117889.1|AF117889 Avena fatua 40S ribosomal protein S3A mRNA, partial cds
          Length = 382

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 35/36 (97%), Gaps = 1/36 (2%)
 Strand = Plus / Minus

                                               
Query: 240 atcagccatcaaaactgactaca-aagttcacgaca 274
           ||||||||||||||||||||||| ||||||||||||
Sbjct: 365 atcagccatcaaaactgactacagaagttcacgaca 330

>gb|AC160763.3| Mus musculus BAC clone RP23-238A4 from chromosome 17, complete
            sequence
          Length = 215626

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 227  aagtactcaagaaatcagccatcaa 251
            |||||||||||||| ||||||||||
Sbjct: 3171 aagtactcaagaaaccagccatcaa 3195

>gb|AC154561.2| Mus musculus BAC clone RP23-400M17 from chromosome 17, complete
             sequence
          Length = 191047

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 227   aagtactcaagaaatcagccatcaa 251
             |||||||||||||| ||||||||||
Sbjct: 73532 aagtactcaagaaaccagccatcaa 73508

>gb|AC099637.7| Mus musculus chromosome 1, clone RP24-257C20, complete sequence
          Length = 169573

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ataaactagatatttagttt 152
             ||||||||||||||||||||
Sbjct: 53980 ataaactagatatttagttt 53961

>ref|XM_533355.2| PREDICTED: Canis familiaris similar to RAP1 interacting factor 1
            (LOC476148), mRNA
          Length = 4636

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 47   gaggtataatgatatcaactggag 70
            |||||| |||||||||||||||||
Sbjct: 3556 gaggtaaaatgatatcaactggag 3533

>gb|AC004381.1|HUAC004381 Homo sapiens Chromosome 16 BAC clone CIT987SK-44M2, complete sequence
          Length = 213541

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    aaacacatatggcaggaata 135
              ||||||||||||||||||||
Sbjct: 148586 aaacacatatggcaggaata 148567

>emb|AL357793.6| Human DNA sequence from clone RP11-98G13 on chromosome 1 Contains a novel
              gene and part of a novel gene, complete sequence
          Length = 145630

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 105    atgcaaacataaaacacata 124
              ||||||||||||||||||||
Sbjct: 114195 atgcaaacataaaacacata 114214

>emb|AL356389.20| Human DNA sequence from clone RP11-352P4 on chromosome 1 Contains the
            3' end of the gene for maba1 (KIAA1324) and the SARS gene
            for seryl-tRNA synthetase, complete sequence
          Length = 97114

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 12   caggagccactacatgcaac 31
            ||||||||||||||||||||
Sbjct: 8548 caggagccactacatgcaac 8529

>emb|AL356127.8| Human DNA sequence from clone RP11-368P1 on chromosome 6, complete
             sequence
          Length = 139086

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 245   ccatcaaaactgactacaaa 264
             ||||||||||||||||||||
Sbjct: 50732 ccatcaaaactgactacaaa 50751

>emb|AL732462.20| Mouse DNA sequence from clone RP23-132J5 on chromosome 1, complete
             sequence
          Length = 91356

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 133   ataaactagatatttagttt 152
             ||||||||||||||||||||
Sbjct: 20153 ataaactagatatttagttt 20134

>ref|XM_231763.3| PREDICTED: Rattus norvegicus nuclear factor, erythroid derived 2,
            like 3 (predicted) (Nfe2l3_predicted), mRNA
          Length = 3024

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  acatatatcatcttctagat 304
            ||||||||||||||||||||
Sbjct: 2643 acatatatcatcttctagat 2624

>gb|AC000055.1|HSAC000055 Human PAC clone DJ073F11 from Xq23, complete sequence
          Length = 93578

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 299  ctagataagaagcagcaaaa 318
            ||||||||||||||||||||
Sbjct: 7414 ctagataagaagcagcaaaa 7395


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,025,059
Number of Sequences: 3902068
Number of extensions: 4025059
Number of successful extensions: 71195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71179
Number of HSP's gapped (non-prelim): 16
length of query: 354
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 332
effective length of database: 17,147,199,772
effective search space: 5692870324304
effective search space used: 5692870324304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)