Clone Name | rbart50c07 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p... | 29 | 5.1 | 2 | IL1R1_MOUSE (P13504) Interleukin-1 receptor type I precursor (IL... | 29 | 5.1 | 3 | MATK_ARIGL (Q4H1B9) Maturase K (Intron maturase) | 28 | 6.7 | 4 | MATK_MUSLA (Q8HV04) Maturase K (Intron maturase) | 28 | 8.8 |
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>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia protein 4| (Trithorax homolog 2) Length = 2715 Score = 28.9 bits (63), Expect = 5.1 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = +3 Query: 285 PWSELVEHSGSELVNDLLQRRVSPTCSNQGAKNDDHDDQRNLNP 416 P E+V H G E + LLQR+ + C Q D +D + P Sbjct: 1054 PREEVVAHPGPEEQDSLLQRKSARRCVKQRPSYDIFEDSDDSEP 1097
>IL1R1_MOUSE (P13504) Interleukin-1 receptor type I precursor (IL-1R-1) (p80)| (CD121a antigen) Length = 576 Score = 28.9 bits (63), Expect = 5.1 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = -2 Query: 360 KWDLLFSAEDHSRVLNPSVPRVQTMVTSLSVWLVFCSNAKFP 235 +W+ F AED+ V +PS R T++T+L++ V ++P Sbjct: 271 EWNDPFLAEDYQFVEHPSTKRKYTLITTLNISEVKSQFYRYP 312
>MATK_ARIGL (Q4H1B9) Maturase K (Intron maturase)| Length = 522 Score = 28.5 bits (62), Expect = 6.7 Identities = 16/49 (32%), Positives = 19/49 (38%) Frame = +1 Query: 148 FCTIPASPTTNHDWTTLSRRSCCSL*MRFWKFCIATEHQPDGQRCYHGL 294 FCT+ P + WT LS RF + C H G HGL Sbjct: 396 FCTVSGHPISKPIWTDLSDSYIIE---RFGRICRNLSHYHSGSSKKHGL 441
>MATK_MUSLA (Q8HV04) Maturase K (Intron maturase)| Length = 511 Score = 28.1 bits (61), Expect = 8.8 Identities = 14/42 (33%), Positives = 18/42 (42%) Frame = +1 Query: 148 FCTIPASPTTNHDWTTLSRRSCCSL*MRFWKFCIATEHQPDG 273 FCT+ P + WT LS C + RF + C H G Sbjct: 385 FCTVSGHPISKSIWTDLSD---CDIINRFGRICRNLSHYHSG 423 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 57,120,719 Number of Sequences: 219361 Number of extensions: 1025871 Number of successful extensions: 2291 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2233 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2291 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2278320915 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)