ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50c06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474584.1| Oryza sativa (japonica cultivar-group), predic... 76 1e-10
2gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoal... 76 1e-10
3dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clon... 76 1e-10
4gb|DQ471309.1| Malus x domestica beta-cyanoalanine synthase 2 mR... 70 6e-09
5emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4,... 70 6e-09
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
7emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 70 6e-09
8gb|AY107771.1| Zea mays PCO121395 mRNA sequence 66 1e-07
9gb|AY207389.1| Hevea brasiliensis latex beta-cyanoalanine syntha... 62 2e-06
10gb|AY207388.1| Hevea brasiliensis phloem beta-cyanoalanine synth... 62 2e-06
11gb|DQ471308.1| Malus x domestica beta-cyanoalanine synthase 1 mR... 62 2e-06
12dbj|AB179751.1| Diospyros kaki DkCAS1 mRNA for beta-cyanoalanine... 58 2e-05
13dbj|AB179752.1| Diospyros kaki DkCAS2 mRNA for beta-cyanoalanine... 56 1e-04
14emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E ... 46 0.092
15dbj|AB029338.1| Solanum tuberosum PCAS-2 mRNA for beta-cyanoalan... 46 0.092
16emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 i... 44 0.36
17emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in... 44 0.36
18gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, com... 42 1.4
19gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, com... 42 1.4
20gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
21gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosom... 42 1.4
22gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, comp... 42 1.4
23emb|Z22784.1|MMTROPIB M.musculus troponin I gene 42 1.4
24ref|XM_778863.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.4
25dbj|AK136302.1| Mus musculus 15 days embryo male testis cDNA, RI... 42 1.4
26gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosom... 42 1.4
27dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
28gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
29gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 42 1.4
30emb|CT030173.7| Mouse DNA sequence from clone RP24-264B23 on chr... 42 1.4
31emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chr... 42 1.4
32gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map... 40 5.7
33gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete se... 40 5.7
34gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complet... 40 5.7
35gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, comple... 40 5.7
36emb|AL138745.19| Human DNA sequence from clone RP3-331H2 on chro... 40 5.7
37emb|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4 40 5.7
38emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chr... 40 5.7
39emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chrom... 40 5.7
40gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Can... 40 5.7
41gb|AC020704.5| Homo sapiens BAC clone RP11-315L6 from 15, comple... 40 5.7
42gb|AC151314.2| Xenopus tropicalis clone ISB-195A7, complete sequ... 40 5.7
43gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc... 40 5.7
44dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 5.7
45gb|U77354.1|RNU77354 Rattus norvegicus troponin I gene, complete... 40 5.7
46gb|AC120840.31| Mus musculus chromosome 19, clone RP24-539E24, c... 40 5.7
47gb|AC151315.2| Xenopus tropicalis clone ISB-195F15, complete seq... 40 5.7
48emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chr... 40 5.7
49dbj|AB027000.1| Solanum tuberosum PCAS-1 mRNA for beta-cyanoalan... 40 5.7
50dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DS... 40 5.7
51dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrom... 40 5.7
52dbj|AP001410.1| Homo sapiens genomic DNA, chromosome 21q22.2, cl... 40 5.7 
>ref|XM_474584.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1134

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 340  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 399
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1042 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 983

                                  
Query: 400  ccgtgttggctcctgatgatat 421
            | ||||| ||||||||||||||
Sbjct: 982  ctgtgttagctcctgatgatat 961



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 35/37 (94%)
 Strand = Plus / Minus

                                                 
Query: 248  ttagtccactggcactggctgcatagcctcggcctcc 284
            |||||||||||||||||||||||| ||||| ||||||
Sbjct: 1134 ttagtccactggcactggctgcatggcctcagcctcc 1098
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>gb|AY720933.1| Oryza sativa (indica cultivar-group) beta-cyanoalanine synthase (CAS)
            mRNA, complete cds
          Length = 1406

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 340  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 399
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039

                                  
Query: 400  ccgtgttggctcctgatgatat 421
            | ||||| ||||||||||||||
Sbjct: 1038 ctgtgttagctcctgatgatat 1017



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 242  tccaagttagtccactggcactggctgcatagcctcggcctcc 284
            |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
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>dbj|AK102512.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033095I16, full
            insert sequence
          Length = 1436

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 71/82 (86%)
 Strand = Plus / Minus

                                                                        
Query: 340  gaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcca 399
            |||||||||| |||||||| ||||||||||| ||| ||||||| |||||||  || || |
Sbjct: 1098 gaacagtcacaatgagcttccctttgttttctggcttctttgctagttcaagagcagcaa 1039

                                  
Query: 400  ccgtgttggctcctgatgatat 421
            | ||||| ||||||||||||||
Sbjct: 1038 ctgtgttagctcctgatgatat 1017



 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Minus

                                                       
Query: 242  tccaagttagtccactggcactggctgcatagcctcggcctcc 284
            |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 1196 tccaagttagtccactggcactggctgcatggcctcagcctcc 1154
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>gb|DQ471309.1| Malus x domestica beta-cyanoalanine synthase 2 mRNA, complete cds
          Length = 1486

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                        
Query: 339  tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 398
            ||||||||||| ||||| || ||||||||||||||| | || ||||| || || ||||||
Sbjct: 1104 tgaacagtcacaatgagtttgcctttgttttcaggctttttagcaagctccattgctgcc 1045

                                   
Query: 399  accgtgttggctcctgatgatat 421
            || ||||||||||| || |||||
Sbjct: 1044 actgtgttggctccagacgatat 1022
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>emb|AL662959.3|OSJN00160 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0019G23,
             complete sequence
          Length = 150305

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 242   tccaagttagtccactggcactggctgcatagcctcggcctcc 284
             |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 57468 tccaagttagtccactggcactggctgcatggcctcagcctcc 57510



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 351   atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 410
             |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 57668 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 57727

                        
Query: 411   cctgatgatat 421
             |||||||||||
Sbjct: 57728 cctgatgatat 57738
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                          
Query: 242     tccaagttagtccactggcactggctgcatagcctcggcctcc 284
               |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 4429736 tccaagttagtccactggcactggctgcatggcctcagcctcc 4429778



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                           
Query: 351     atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 410
               |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 4429936 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 4429995

                          
Query: 411     cctgatgatat 421
               |||||||||||
Sbjct: 4429996 cctgatgatat 4430006
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>emb|AL442113.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0806H05, complete
             sequence
          Length = 102515

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 41/43 (95%)
 Strand = Plus / Plus

                                                        
Query: 242   tccaagttagtccactggcactggctgcatagcctcggcctcc 284
             |||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 93999 tccaagttagtccactggcactggctgcatggcctcagcctcc 94041



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                         
Query: 351   atgagctttcctttgttttcaggcctctttgcaagttcaatcgctgccaccgtgttggct 410
             |||||||| ||||||||||| ||| ||||||| |||||||  || || || ||||| |||
Sbjct: 94199 atgagcttccctttgttttctggcttctttgctagttcaagagcagcaactgtgttagct 94258

                        
Query: 411   cctgatgatat 421
             |||||||||||
Sbjct: 94259 cctgatgatat 94269
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>gb|AY107771.1| Zea mays PCO121395 mRNA sequence
          Length = 1573

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 117/145 (80%)
 Strand = Plus / Minus

                                                                        
Query: 279  gcctccttcctcagaccctcgaacagcgccgacgataagtatcgctctcccgcgcttgga 338
            ||||||||||||||  | ||||||||||| ||||| | ||| ||||| ||   ||| |||
Sbjct: 1286 gcctccttcctcagctcatcgaacagcgcggacgacaggtaccgctcgccaaggctcgga 1227

                                                                        
Query: 339  tgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaatcgctgcc 398
             |||| |||||||||||||| || ||||| || |||||||| || || || |  || || 
Sbjct: 1226 agaacggtcacgatgagcttccccttgttctccggcctcttggctagctcgagagcagca 1167

                                     
Query: 399  accgtgttggctcctgatgatatcc 423
            || ||||||||||| ||||||||||
Sbjct: 1166 acggtgttggctcccgatgatatcc 1142
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>gb|AY207389.1| Hevea brasiliensis latex beta-cyanoalanine synthase mRNA, complete
            cds
          Length = 1415

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 333  cttggatgaacagtcacgatgagctttcctttgtt 367
            ||||||||||||||||||||||| |||||||||||
Sbjct: 1103 cttggatgaacagtcacgatgagttttcctttgtt 1069
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>gb|AY207388.1| Hevea brasiliensis phloem beta-cyanoalanine synthase mRNA, complete
            cds
          Length = 1411

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 333  cttggatgaacagtcacgatgagctttcctttgtt 367
            ||||||||||||||||||||||| |||||||||||
Sbjct: 1087 cttggatgaacagtcacgatgagttttcctttgtt 1053
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>gb|DQ471308.1| Malus x domestica beta-cyanoalanine synthase 1 mRNA, complete cds
          Length = 1497

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 88/107 (82%)
 Strand = Plus / Minus

                                                                        
Query: 315  aagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttcaggc 374
            ||||||||||| ||   ||| || ||||||||||| ||||| || ||||||||||| |||
Sbjct: 1164 aagtatcgctccccaaagctcgggtgaacagtcacaatgagtttgcctttgttttctggc 1105

                                                           
Query: 375  ctctttgcaagttcaatcgctgccaccgtgttggctcctgatgatat 421
             | || ||||| || || |||||||| ||||||||||| || |||||
Sbjct: 1104 tttttagcaagctccattgctgccacagtgttggctccagacgatat 1058
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>dbj|AB179751.1| Diospyros kaki DkCAS1 mRNA for beta-cyanoalanine synthase, partial
           cds
          Length = 826

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 41/45 (91%)
 Strand = Plus / Minus

                                                        
Query: 332 gcttggatgaacagtcacgatgagctttcctttgttttcaggcct 376
           |||||||||||||||||| |||||||| |||||||| || |||||
Sbjct: 562 gcttggatgaacagtcacaatgagcttgcctttgttctctggcct 518
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>dbj|AB179752.1| Diospyros kaki DkCAS2 mRNA for beta-cyanoalanine synthase, partial
           cds
          Length = 886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                       
Query: 332 gcttggatgaacagtcacgatgagctttcctttgttttcaggcctctttgcaagttcaat 391
           |||||| |||||||||||||| || || |||||||| || ||| || ||||||||  || 
Sbjct: 562 gcttgggtgaacagtcacgataagtttgcctttgttctctggcttccttgcaagtctaag 503

                                           
Query: 392 cgctgccaccgtgttggctcctgatgatatcc 423
            ||||| || || || ||||||||||||||||
Sbjct: 502 tgctgcaactgtattagctcctgatgatatcc 471
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>emb|CT573071.1| Kuenenia stuttgartiensis genome fragment KUST_E (5 of 5)
          Length = 2199546

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 354     agctttcctttgttttcaggcct 376
               |||||||||||||||||||||||
Sbjct: 1225934 agctttcctttgttttcaggcct 1225956
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>dbj|AB029338.1| Solanum tuberosum PCAS-2 mRNA for beta-cyanoalanine synthase like
            protein, complete cds
          Length = 1250

 Score = 46.1 bits (23), Expect = 0.092
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                       
Query: 312  gataagtatcgctctcccgcgcttggatgaacagtcacgatgagctttcctttgttttc 370
            |||||||||||||||||    |||| ||| |||||||| ||||| || |||||||||||
Sbjct: 1075 gataagtatcgctctccaaaacttgcatgtacagtcactatgagtttgcctttgttttc 1017
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>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24,
             complete sequence
          Length = 155029

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   ttcaactgttgtttacacaatg 140
             ||||||||||||||||||||||
Sbjct: 70301 ttcaactgttgtttacacaatg 70280
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>emb|BX784022.6| Zebrafish DNA sequence from clone CH211-152C8 in linkage group 18,
             complete sequence
          Length = 153244

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 119   ttcaactgttgtttacacaatg 140
             ||||||||||||||||||||||
Sbjct: 70291 ttcaactgttgtttacacaatg 70270
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>gb|AC118696.14| Mus musculus chromosome 3, clone RP24-62O16, complete sequence
          Length = 190616

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 256   ctggcactggctgcatagcct 276
             |||||||||||||||||||||
Sbjct: 27462 ctggcactggctgcatagcct 27442
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>gb|AC161218.10| Mus musculus chromosome 7, clone RP24-161J8, complete sequence
          Length = 181156

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 272    agcctcggcctccttcctcagaccc 296
              ||||| |||||||||||||||||||
Sbjct: 135981 agcctaggcctccttcctcagaccc 135957
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>gb|AC134926.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0056I10,
              complete sequence
          Length = 158833

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                   
Query: 255    actggcactggctgcatagcctcggcctccttcctca 291
              ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 101172 actggcactggttgcacagcctcagcctcctttctca 101208
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>gb|AC116585.3| Mus musculus BAC clone RP23-358A16 from chromosome 3, complete sequence
          Length = 227492

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 256   ctggcactggctgcatagcct 276
             |||||||||||||||||||||
Sbjct: 10913 ctggcactggctgcatagcct 10933
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>gb|AC119673.3| Homo sapiens chromosome 1 clone RP11-212H11, complete sequence
          Length = 187660

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     acatatatgtatatcatacat 77
              |||||||||||||||||||||
Sbjct: 179145 acatatatgtatatcatacat 179125
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>emb|Z22784.1|MMTROPIB M.musculus troponin I gene
          Length = 5691

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 272  agcctcggcctccttcctcagaccc 296
            ||||| |||||||||||||||||||
Sbjct: 3376 agcctaggcctccttcctcagaccc 3400
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>ref|XM_778863.1| PREDICTED: Strongylocentrotus purpuratus similar to dystonin isoform 1
             (LOC578708), mRNA
          Length = 33630

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 195   ttgcaacatggtaatgcagtg 215
             |||||||||||||||||||||
Sbjct: 10211 ttgcaacatggtaatgcagtg 10191
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>dbj|AK136302.1| Mus musculus 15 days embryo male testis cDNA, RIKEN full-length
           enriched library, clone:8030406L09
           product:unclassifiable, full insert sequence
          Length = 2811

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 57  acatatatgtatatcatacat 77
           |||||||||||||||||||||
Sbjct: 830 acatatatgtatatcatacat 850
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>gb|AC160634.2| Mus musculus BAC clone RP23-429J21 from chromosome 12, complete
             sequence
          Length = 176160

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 57    acatatatgtatatcatacat 77
             |||||||||||||||||||||
Sbjct: 60437 acatatatgtatatcatacat 60457
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 255      actggcactggctgcatagcctcggcctccttcctca 291
                ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 18365807 actggcactggttgcacagcctcagcctcctttctca 18365843
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 255      actggcactggctgcatagcctcggcctccttcctca 291
                ||||||||||| |||| |||||| |||||||| ||||
Sbjct: 18525208 actggcactggttgcacagcctcagcctcctttctca 18525244
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 367     tttcaggcctctttgcaagtt 387
               |||||||||||||||||||||
Sbjct: 2435669 tttcaggcctctttgcaagtt 2435649
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>emb|CT030173.7| Mouse DNA sequence from clone RP24-264B23 on chromosome 12, complete
              sequence
          Length = 156510

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 57     acatatatgtatatcatacat 77
              |||||||||||||||||||||
Sbjct: 122143 acatatatgtatatcatacat 122163
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>emb|AL670708.9| Mouse DNA sequence from clone RP23-125A21 on chromosome 4, complete
              sequence
          Length = 207097

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     acatatatgtatatcatacat 77
              |||||||||||||||||||||
Sbjct: 173878 acatatatgtatatcatacat 173858
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>gb|AC152456.1| Pan troglodytes chromosome X clone PTB-055J03 map human ortholog q25,
             complete sequence
          Length = 142891

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    actcaaacatatatgtatat 70
             ||||||||||||||||||||
Sbjct: 64918 actcaaacatatatgtatat 64899
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>gb|AC145799.2| Xenopus tropicalis clone CH216-55B16, complete sequence
          Length = 163674

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 204  ggtaatgcagtgaatttatt 223
            ||||||||||||||||||||
Sbjct: 6137 ggtaatgcagtgaatttatt 6156
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>gb|AC116996.3| Mus musculus BAC clone RP23-6B22 from 15, complete sequence
          Length = 229669

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     atatcatacatctccactct 86
              ||||||||||||||||||||
Sbjct: 151013 atatcatacatctccactct 150994
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>gb|AC114916.5| Mus musculus BAC clone RP23-68E10 from 15, complete sequence
          Length = 207411

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 67     atatcatacatctccactct 86
              ||||||||||||||||||||
Sbjct: 194363 atatcatacatctccactct 194382
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>emb|AL138745.19| Human DNA sequence from clone RP3-331H2 on chromosome Xq25-26.2
             Contains the 5' end of the SMARCA1 gene for SWI/SNF
             related, matrix associated, actin dependent regulator of
             chromatin (subfamily a, member 1), the 5' end of the OCRL
             gene for oculocerebrorenal syndrome of Lowe and  two CpG
             islands, complete sequence
          Length = 69637

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    actcaaacatatatgtatat 70
             ||||||||||||||||||||
Sbjct: 29594 actcaaacatatatgtatat 29575
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>emb|X72803.1|CTHIS C.thummi genes for histones H1, H2A, H3 and H4
          Length = 6696

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 141 tccacatgaaggaacaaacc 160
           ||||||||||||||||||||
Sbjct: 3   tccacatgaaggaacaaacc 22
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>emb|AL669871.18| Mouse DNA sequence from clone RP23-48J15 on chromosome 11 Contains a
              novel gene and a novel pseudogene, complete sequence
          Length = 208519

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 356    ctttcctttgttttcaggcc 375
              ||||||||||||||||||||
Sbjct: 202686 ctttcctttgttttcaggcc 202667
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>emb|AL672260.25| Mouse DNA sequence from clone DN-127L1 on chromosome 3 Contains a
              Saccharomyces cerevisiae Nip7p homolog (pEachy) homolog
              pseudogene, a tumor protein translationally-controlled 1
              (Tpt1) pseudogene, a high mobility group box 2 (Hmgb2)
              pseudogene and the Cd2 gene for CD2 antigen, complete
              sequence
          Length = 169010

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     acatctccactctccagaga 93
              ||||||||||||||||||||
Sbjct: 118173 acatctccactctccagaga 118192
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>gb|AC055710.10| Homo sapiens 3 BAC RP11-307E22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169964

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 358   ttcctttgttttcaggcctc 377
             ||||||||||||||||||||
Sbjct: 10065 ttcctttgttttcaggcctc 10084
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>gb|AC020704.5| Homo sapiens BAC clone RP11-315L6 from 15, complete sequence
          Length = 191031

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 54     caaacatatatgtatatcatacat 77
              ||||||||||||||||| ||||||
Sbjct: 178865 caaacatatatgtatatgatacat 178888
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>gb|AC151314.2| Xenopus tropicalis clone ISB-195A7, complete sequence
          Length = 108847

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    aactcaaacatatatgtatatcat 73
             |||||||| |||||||||||||||
Sbjct: 11048 aactcaaatatatatgtatatcat 11071
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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human
           BAC Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 358 ttcctttgttttcaggcctc 377
           ||||||||||||||||||||
Sbjct: 168 ttcctttgttttcaggcctc 149
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>dbj|AP001730.1| Homo sapiens genomic DNA, chromosome 21q, section 74/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 58     catatatgtatatcatacat 77
              ||||||||||||||||||||
Sbjct: 253699 catatatgtatatcatacat 253680
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>gb|U77354.1|RNU77354 Rattus norvegicus troponin I gene, complete cds
          Length = 4517

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 272  agcctcggcctccttcctcagacc 295
            ||||| ||||||||||||||||||
Sbjct: 2694 agcctaggcctccttcctcagacc 2717
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>gb|AC120840.31| Mus musculus chromosome 19, clone RP24-539E24, complete sequence
          Length = 189283

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 52    ctcaaacatatatgtatatcatacatct 79
             |||||||||| ||||| |||||||||||
Sbjct: 13869 ctcaaacataaatgtacatcatacatct 13896
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>gb|AC151315.2| Xenopus tropicalis clone ISB-195F15, complete sequence
          Length = 73302

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 50    aactcaaacatatatgtatatcat 73
             |||||||| |||||||||||||||
Sbjct: 59325 aactcaaatatatatgtatatcat 59348
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>emb|AL645930.15| Mouse DNA sequence from clone RP23-434L7 on chromosome 3, complete
              sequence
          Length = 227993

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     acatctccactctccagaga 93
              ||||||||||||||||||||
Sbjct: 207676 acatctccactctccagaga 207695
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>dbj|AB027000.1| Solanum tuberosum PCAS-1 mRNA for beta-cyanoalanine synthase,
           complete cds
          Length = 1206

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 345 gtcacgatgagctttcctttgttttcaggcct 376
           ||||| ||||| |||||||||||||| |||||
Sbjct: 993 gtcactatgagttttcctttgttttctggcct 962
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>dbj|AP000160.1| Homo sapiens genomic DNA, chromosome 21q22.2, DSCR region, clone
            D47-S479, segment 12/16, complete sequence
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 58   catatatgtatatcatacat 77
            ||||||||||||||||||||
Sbjct: 1116 catatatgtatatcatacat 1097
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>dbj|AP000018.2| Homo sapiens genomic DNA of 21q22.2 Down Syndrome region, segment 9/13
          Length = 100000

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catatatgtatatcatacat 77
             ||||||||||||||||||||
Sbjct: 35512 catatatgtatatcatacat 35493
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>dbj|AP001410.1| Homo sapiens genomic DNA, chromosome 21q22.2, clone:7A4, LB7T-ERG
             region, complete sequence
          Length = 39834

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    catatatgtatatcatacat 77
             ||||||||||||||||||||
Sbjct: 34206 catatatgtatatcatacat 34187


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,189,831
Number of Sequences: 3902068
Number of extensions: 4189831
Number of successful extensions: 88784
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 88576
Number of HSP's gapped (non-prelim): 206
length of query: 423
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 401
effective length of database: 17,147,199,772
effective search space: 6876027108572
effective search space used: 6876027108572
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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