ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50c01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188795.2| Oryza sativa (japonica cultivar-group), mRNA 238 1e-59
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
3dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
4dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic D... 238 1e-59
5dbj|AK065831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
6ref|XM_463633.1| Oryza sativa (japonica cultivar-group), predic... 54 4e-04
7ref|NM_185177.1| Oryza sativa (japonica cultivar-group), mRNA 54 4e-04
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 54 4e-04
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
10dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
11dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
12dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
13gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genom... 54 4e-04
14dbj|AK105978.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
15dbj|AK104518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
16dbj|AK071606.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
17ref|XM_493813.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
18ref|XM_468593.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
19ref|XM_463632.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
20ref|XM_463631.1| Oryza sativa (japonica cultivar-group), predic... 48 0.023
21gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome... 48 0.023
22dbj|AK107508.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.023
23dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.023
24ref|XM_463635.1| Oryza sativa (japonica cultivar-group), predic... 46 0.090
25dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.090
26dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.090
27gb|AC122333.2| Mus musculus BAC clone RP23-346J12 from chromosom... 44 0.36
28gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 44 0.36
29gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, comp... 44 0.36
30gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, co... 44 0.36
31gb|AC140501.5| Mus musculus BAC clone RP23-178E11 from chromosom... 44 0.36
32gb|AC090563.17| Mus musculus chromosome 6, clone RP23-451F7, com... 44 0.36
33gb|AC141325.1| Pan troglodytes BAC clone RP43-168D7 from 7, comp... 42 1.4
34gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, co... 42 1.4
35gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's ... 42 1.4
36emb|BX571885.7| Mouse DNA sequence from clone RP23-17O21 on chro... 42 1.4
37emb|BX682543.5| Mouse DNA sequence from clone RP23-56I16 on chro... 42 1.4
38gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320... 42 1.4
39gb|AF423072.1|AF423072 Homo sapiens signal transducer and activa... 42 1.4
40gb|AC073572.19|AC073572 Homo sapiens 12 BAC RP5-901N10 (Roswell ... 42 1.4
41gb|AC073225.5| Homo sapiens BAC clone RP11-611G1 from 2, complet... 42 1.4
42gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complet... 42 1.4
43gb|AC007938.1|AC007938 Homo sapiens clone RP11-2E11 from 7q31, c... 42 1.4
44emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in... 42 1.4
45gb|AC005551.1|AC005551 Homo sapiens chromosome 19, cosmid R26529... 42 1.4
46dbj|AB209043.1| Homo sapiens mRNA for signal transducer and acti... 42 1.4
47emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on ch... 42 1.4
48gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome 40 5.6
49ref|XM_508557.1| PREDICTED: Pan troglodytes similar to pecanex-l... 40 5.6
50gb|AC008031.6| Trypanosoma brucei chromosome 2 clone RPCI93-25N1... 40 5.6
51gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence 40 5.6
52gb|AC150847.5| Bos taurus BAC CH240-372I17 (Children's Hospital... 40 5.6
53gb|BC010492.1| Homo sapiens signal-induced proliferation-associa... 40 5.6
54emb|Z81127.1|CET22G5 Caenorhabditis elegans Cosmid T22G5, comple... 40 5.6
55gb|AC121920.3| Mus musculus BAC clone RP24-196F6 from chromosome... 40 5.6
56gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, comple... 40 5.6
57gb|AC125353.2| Mus musculus BAC clone RP23-455B17 from 6, comple... 40 5.6
58gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, co... 40 5.6
59gb|AC113270.8| Mus musculus chromosome 7, clone RP23-375O10, com... 40 5.6
60ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 40 5.6
61ref|XM_739362.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 5.6
62ref|XM_673431.1| Plasmodium berghei strain ANKA hypothetical pro... 40 5.6
63gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, com... 40 5.6
64emb|Z83851.17|HS989H11 Human DNA sequence from clone CTA-989H11 ... 40 5.6
65emb|AL450026.10| Human DNA sequence from clone RP11-439A18 on ch... 40 5.6
66emb|AL049637.43|HSJ850O15 Human DNA sequence from clone RP5-850O... 40 5.6
67emb|Z49705.1|SC8520X S.cerevisiae chromosome XIII cosmid 8520 40 5.6
68emb|AL591981.1| Listeria monocytogenes strain EGD, complete geno... 40 5.6
69gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Ho... 40 5.6
70ref|NM_204918.1| Gallus gallus tight junction protein 2 (zona oc... 40 5.6
71gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, comp... 40 5.6
72gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Can... 40 5.6
73gb|AF433946.1| Myoprocta pratti isolate K13 growth hormone recep... 40 5.6
74gb|AF433945.1| Myoprocta acouchy isolate H5837 growth hormone re... 40 5.6
75gb|AF433944.1| Myoprocta acouchy isolate H5836 growth hormone re... 40 5.6
76gb|AF433942.1| Dasyprocta punctata isolate NK14094 growth hormon... 40 5.6
77dbj|AK136850.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 5.6
78emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in... 40 5.6
79dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
80gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosom... 40 5.6
81gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17... 40 5.6
82gb|BC021857.1| Homo sapiens, clone IMAGE:4994346, mRNA 40 5.6
83emb|BX649608.7| Zebrafish DNA sequence from clone CH211-117L17 i... 40 5.6
84dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome ... 40 5.6
85gb|AC150477.3| Monodelphis domestica clone VMRC6-470J24, complet... 40 5.6
86dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.6
87emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on ch... 40 5.6
88gb|AC129885.3| Didelphis virginiana clone LB3-35M17, complete se... 40 5.6
89dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.6
90gb|AF085184.1|AF085184 Gallus gallus tight junction protein (ZO-... 40 5.6
91gb|AF052237.1|HSIPA1G6 Homo sapiens GTPase-activating protein (S... 40 5.6
92gb|AF029789.1|AF029789 Homo sapiens GTPase-activating protein (S... 40 5.6
93emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14,... 40 5.6
94emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on ch... 40 5.6
95emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chro... 40 5.6
96gb|BC110353.1| Homo sapiens cDNA clone MGC:102688 IMAGE:5223107,... 40 5.6
97ref|NM_006747.2| Homo sapiens signal-induced proliferation-assoc... 40 5.6
98ref|NM_153253.28| Homo sapiens signal-induced proliferation-asso... 40 5.6
99gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold 40 5.6
100gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold 40 5.6
101gb|J04965.1|HUMRNAPII Human RNA polymerase II 23kD subunit (POLR... 40 5.6
102dbj|AB005666.1| Homo sapiens mRNA for GTPase-activating protein,... 40 5.6
103dbj|AP001362.5| Homo sapiens genomic DNA, chromosome 11, clone:R... 40 5.6 
>ref|NM_188795.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1571

 Score =  238 bits (120), Expect = 1e-59
 Identities = 252/296 (85%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatcagtgtatgcacctcccgggcaccgtccacgagaagtaccccgcgttcccggcggcg 177
            ||||| |||||||||||||| |||||| |||| ||||||||  ||  ||||||||| || 
Sbjct: 1290 tatcaatgtatgcacctccctggcaccctccatgagaagtagtccatgttcccggcagca 1231

                                                                        
Query: 178  acccgcgccctgtacgtcttccaatcctccaacacattcttgagatcaaagagcttgttc 237
            ||||   || | |||||||||||||| || | ||||||| | ||||| ||||||||||| 
Sbjct: 1230 accctttccttatacgtcttccaatcgtcgagcacattcctcagatcgaagagcttgttg 1171

                                                                        
Query: 238  tgcagccccacgcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgtgc 297
            |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 1170 tgcagcccaacgcagcagttggcgtgcatggtgacaaccctgccgaggtccttgccgtgc 1111

                                                                        
Query: 298  tggcagaaccccccgaaccggccggtgtcgaggaactgcaccctggtgccgaggcggcgg 357
            ||||||||||| |||||  |||| |||||||||||| ||||  ||| ||||| | |  | 
Sbjct: 1110 tggcagaacccgccgaagtggcccgtgtcgaggaaccgcacggtggcgccgacgtgcggc 1051

                                                                    
Query: 358  ggcacgccctccttgacgatcttgtcgaacacgtactgctcgtgcatccccgggaa 413
            |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||
Sbjct: 1050 ggcacgccttccttgacgatccggtcgaacacgaactgctcgtgcttccccgggaa 995
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  238 bits (120), Expect = 1e-59
 Identities = 252/296 (85%)
 Strand = Plus / Minus

                                                                            
Query: 118      tatcagtgtatgcacctcccgggcaccgtccacgagaagtaccccgcgttcccggcggcg 177
                ||||| |||||||||||||| |||||| |||| ||||||||  ||  ||||||||| || 
Sbjct: 11537011 tatcaatgtatgcacctccctggcaccctccatgagaagtagtccatgttcccggcagca 11536952

                                                                            
Query: 178      acccgcgccctgtacgtcttccaatcctccaacacattcttgagatcaaagagcttgttc 237
                ||||   || | |||||||||||||| || | ||||||| | ||||| ||||||||||| 
Sbjct: 11536951 accctttccttatacgtcttccaatcgtcgagcacattcctcagatcgaagagcttgttg 11536892

                                                                            
Query: 238      tgcagccccacgcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgtgc 297
                |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 11536891 tgcagcccaacgcagcagttggcgtgcatggtgacaaccctgccgaggtccttgccgtgc 11536832

                                                                            
Query: 298      tggcagaaccccccgaaccggccggtgtcgaggaactgcaccctggtgccgaggcggcgg 357
                ||||||||||| |||||  |||| |||||||||||| ||||  ||| ||||| | |  | 
Sbjct: 11536831 tggcagaacccgccgaagtggcccgtgtcgaggaaccgcacggtggcgccgacgtgcggc 11536772

                                                                        
Query: 358      ggcacgccctccttgacgatcttgtcgaacacgtactgctcgtgcatccccgggaa 413
                |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||
Sbjct: 11536771 ggcacgccttccttgacgatccggtcgaacacgaactgctcgtgcttccccgggaa 11536716
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>dbj|AP005830.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1120F06
          Length = 186712

 Score =  238 bits (120), Expect = 1e-59
 Identities = 252/296 (85%)
 Strand = Plus / Minus

                                                                          
Query: 118    tatcagtgtatgcacctcccgggcaccgtccacgagaagtaccccgcgttcccggcggcg 177
              ||||| |||||||||||||| |||||| |||| ||||||||  ||  ||||||||| || 
Sbjct: 100669 tatcaatgtatgcacctccctggcaccctccatgagaagtagtccatgttcccggcagca 100610

                                                                          
Query: 178    acccgcgccctgtacgtcttccaatcctccaacacattcttgagatcaaagagcttgttc 237
              ||||   || | |||||||||||||| || | ||||||| | ||||| ||||||||||| 
Sbjct: 100609 accctttccttatacgtcttccaatcgtcgagcacattcctcagatcgaagagcttgttg 100550

                                                                          
Query: 238    tgcagccccacgcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgtgc 297
              |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 100549 tgcagcccaacgcagcagttggcgtgcatggtgacaaccctgccgaggtccttgccgtgc 100490

                                                                          
Query: 298    tggcagaaccccccgaaccggccggtgtcgaggaactgcaccctggtgccgaggcggcgg 357
              ||||||||||| |||||  |||| |||||||||||| ||||  ||| ||||| | |  | 
Sbjct: 100489 tggcagaacccgccgaagtggcccgtgtcgaggaaccgcacggtggcgccgacgtgcggc 100430

                                                                      
Query: 358    ggcacgccctccttgacgatcttgtcgaacacgtactgctcgtgcatccccgggaa 413
              |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||
Sbjct: 100429 ggcacgccttccttgacgatccggtcgaacacgaactgctcgtgcttccccgggaa 100374
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>dbj|AP005258.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0446G09
          Length = 146898

 Score =  238 bits (120), Expect = 1e-59
 Identities = 252/296 (85%)
 Strand = Plus / Minus

                                                                          
Query: 118    tatcagtgtatgcacctcccgggcaccgtccacgagaagtaccccgcgttcccggcggcg 177
              ||||| |||||||||||||| |||||| |||| ||||||||  ||  ||||||||| || 
Sbjct: 146531 tatcaatgtatgcacctccctggcaccctccatgagaagtagtccatgttcccggcagca 146472

                                                                          
Query: 178    acccgcgccctgtacgtcttccaatcctccaacacattcttgagatcaaagagcttgttc 237
              ||||   || | |||||||||||||| || | ||||||| | ||||| ||||||||||| 
Sbjct: 146471 accctttccttatacgtcttccaatcgtcgagcacattcctcagatcgaagagcttgttg 146412

                                                                          
Query: 238    tgcagccccacgcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgtgc 297
              |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 146411 tgcagcccaacgcagcagttggcgtgcatggtgacaaccctgccgaggtccttgccgtgc 146352

                                                                          
Query: 298    tggcagaaccccccgaaccggccggtgtcgaggaactgcaccctggtgccgaggcggcgg 357
              ||||||||||| |||||  |||| |||||||||||| ||||  ||| ||||| | |  | 
Sbjct: 146351 tggcagaacccgccgaagtggcccgtgtcgaggaaccgcacggtggcgccgacgtgcggc 146292

                                                                      
Query: 358    ggcacgccctccttgacgatcttgtcgaacacgtactgctcgtgcatccccgggaa 413
              |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||
Sbjct: 146291 ggcacgccttccttgacgatccggtcgaacacgaactgctcgtgcttccccgggaa 146236
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>dbj|AK065831.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013037A06, full
            insert sequence
          Length = 1571

 Score =  238 bits (120), Expect = 1e-59
 Identities = 252/296 (85%)
 Strand = Plus / Minus

                                                                        
Query: 118  tatcagtgtatgcacctcccgggcaccgtccacgagaagtaccccgcgttcccggcggcg 177
            ||||| |||||||||||||| |||||| |||| ||||||||  ||  ||||||||| || 
Sbjct: 1290 tatcaatgtatgcacctccctggcaccctccatgagaagtagtccatgttcccggcagca 1231

                                                                        
Query: 178  acccgcgccctgtacgtcttccaatcctccaacacattcttgagatcaaagagcttgttc 237
            ||||   || | |||||||||||||| || | ||||||| | ||||| ||||||||||| 
Sbjct: 1230 accctttccttatacgtcttccaatcgtcgagcacattcctcagatcgaagagcttgttg 1171

                                                                        
Query: 238  tgcagccccacgcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgtgc 297
            |||||||| |||||||||||||||||||||||||| | |||||| |||||||||||||||
Sbjct: 1170 tgcagcccaacgcagcagttggcgtgcatggtgacaaccctgccgaggtccttgccgtgc 1111

                                                                        
Query: 298  tggcagaaccccccgaaccggccggtgtcgaggaactgcaccctggtgccgaggcggcgg 357
            ||||||||||| |||||  |||| |||||||||||| ||||  ||| ||||| | |  | 
Sbjct: 1110 tggcagaacccgccgaagtggcccgtgtcgaggaaccgcacggtggcgccgacgtgcggc 1051

                                                                    
Query: 358  ggcacgccctccttgacgatcttgtcgaacacgtactgctcgtgcatccccgggaa 413
            |||||||| ||||||||||||  |||||||||| ||||||||||| ||||||||||
Sbjct: 1050 ggcacgccttccttgacgatccggtcgaacacgaactgctcgtgcttccccgggaa 995
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>ref|XM_463633.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 696

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 231 cttgttctgcagccccacgcagcagttggcgtgca 265
           |||||||| |||||| |||||||||||||||||||
Sbjct: 561 cttgttctccagcccgacgcagcagttggcgtgca 527
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>ref|NM_185177.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1447

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 249  gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
            ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 1113 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 1067
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 249      gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
                ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 35464767 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 35464721



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 247     acgcagcagttggcgtgcatggtg 270
               ||||||||||||||||||||||||
Sbjct: 1648005 acgcagcagttggcgtgcatggtg 1648028
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                               
Query: 249      gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
                ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 35554839 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 35554793



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 247     acgcagcagttggcgtgcatggtg 270
               ||||||||||||||||||||||||
Sbjct: 1648003 acgcagcagttggcgtgcatggtg 1648026
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                   
Query: 231      cttgttctgcagccccacgcagcagttggcgtgca 265
                |||||||| |||||| |||||||||||||||||||
Sbjct: 40199956 cttgttctccagcccgacgcagcagttggcgtgca 40199922



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 247      acgcagcagttggcgtgcatggtg 270
                ||||||||||||||||||||||||
Sbjct: 40196778 acgcagcagttggcgtgcatggtg 40196755



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                        
Query: 247      acgcagcagttggcgtgcatggtg 270
                ||||||||||||||||||||||||
Sbjct: 40187850 acgcagcagttggcgtgcatggtg 40187827



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 247      acgcagcagttggcgtgcatggtgacg 273
                |||||||||| ||||||||||||||||
Sbjct: 40206393 acgcagcagtcggcgtgcatggtgacg 40206367
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>dbj|AP003437.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0678F11
          Length = 154292

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                 
Query: 231    cttgttctgcagccccacgcagcagttggcgtgca 265
              |||||||| |||||| |||||||||||||||||||
Sbjct: 143040 cttgttctccagcccgacgcagcagttggcgtgca 143006



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 247    acgcagcagttggcgtgcatggtg 270
              ||||||||||||||||||||||||
Sbjct: 139862 acgcagcagttggcgtgcatggtg 139839



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 247    acgcagcagttggcgtgcatggtg 270
              ||||||||||||||||||||||||
Sbjct: 130934 acgcagcagttggcgtgcatggtg 130911



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 247    acgcagcagttggcgtgcatggtgacg 273
              |||||||||| ||||||||||||||||
Sbjct: 149477 acgcagcagtcggcgtgcatggtgacg 149451
to top
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1793G04
          Length = 156714

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                                
Query: 231   cttgttctgcagccccacgcagcagttggcgtgca 265
             |||||||| |||||| |||||||||||||||||||
Sbjct: 65734 cttgttctccagcccgacgcagcagttggcgtgca 65700



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 247   acgcagcagttggcgtgcatggtg 270
             ||||||||||||||||||||||||
Sbjct: 62556 acgcagcagttggcgtgcatggtg 62533



 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 247   acgcagcagttggcgtgcatggtg 270
             ||||||||||||||||||||||||
Sbjct: 53628 acgcagcagttggcgtgcatggtg 53605



 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 247   acgcagcagttggcgtgcatggtgacg 273
             |||||||||| ||||||||||||||||
Sbjct: 72171 acgcagcagtcggcgtgcatggtgacg 72145
to top
>gb|AC092559.4| Oryza sativa chromosome 3 BAC OSJNBb0096M04 genomic sequence, complete
             sequence
          Length = 133846

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 249   gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
             ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 22859 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 22905
to top
>dbj|AK105978.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F09, full
            insert sequence
          Length = 1474

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 249  gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
            ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 1131 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 1085
to top
>dbj|AK104518.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D02, full
            insert sequence
          Length = 1433

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 249  gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
            ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 1101 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 1055
to top
>dbj|AK071606.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023099J20, full
            insert sequence
          Length = 1470

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                           
Query: 249  gcagcagttggcgtgcatggtgacgatcctgcccaggtccttgccgt 295
            ||||||||||||||||||||||  |||| ||| ||| ||||||||||
Sbjct: 1127 gcagcagttggcgtgcatggtgcagatcttgctcagatccttgccgt 1081
to top
>ref|XM_493813.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 804

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 247 acgcagcagttggcgtgcatggtg 270
           ||||||||||||||||||||||||
Sbjct: 683 acgcagcagttggcgtgcatggtg 660
to top
>ref|XM_468593.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1554

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 247  acgcagcagttggcgtgcatggtg 270
            ||||||||||||||||||||||||
Sbjct: 1217 acgcagcagttggcgtgcatggtg 1194
to top
>ref|XM_463632.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1110

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 247 acgcagcagttggcgtgcatggtg 270
           ||||||||||||||||||||||||
Sbjct: 938 acgcagcagttggcgtgcatggtg 915
to top
>ref|XM_463631.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1101

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 247 acgcagcagttggcgtgcatggtg 270
           ||||||||||||||||||||||||
Sbjct: 971 acgcagcagttggcgtgcatggtg 948
to top
>gb|AC099739.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1528D07,
             complete sequence
          Length = 87592

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 247   acgcagcagttggcgtgcatggtg 270
             ||||||||||||||||||||||||
Sbjct: 55451 acgcagcagttggcgtgcatggtg 55474
to top
>dbj|AK107508.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-129-E08, full
           insert sequence
          Length = 729

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 247 acgcagcagttggcgtgcatggtg 270
           ||||||||||||||||||||||||
Sbjct: 379 acgcagcagttggcgtgcatggtg 356
to top
>dbj|AP000615.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3,
             clone:P0043E01
          Length = 154128

 Score = 48.1 bits (24), Expect = 0.023
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 247   acgcagcagttggcgtgcatggtg 270
             ||||||||||||||||||||||||
Sbjct: 60468 acgcagcagttggcgtgcatggtg 60491
to top
>ref|XM_463635.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1119

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 247 acgcagcagttggcgtgcatggtgacg 273
           |||||||||| ||||||||||||||||
Sbjct: 959 acgcagcagtcggcgtgcatggtgacg 933
to top
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OJ1485_B09
          Length = 66599

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 247  acgcagcagttggcgtgcatggtgacg 273
            |||||||||| ||||||||||||||||
Sbjct: 5345 acgcagcagtcggcgtgcatggtgacg 5319
to top
>dbj|AK071688.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023113H16, full
           insert sequence
          Length = 1334

 Score = 46.1 bits (23), Expect = 0.090
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 247 acgcagcagttggcgtgcatggtgacg 273
           |||||||||| ||||||||||||||||
Sbjct: 987 acgcagcagtcggcgtgcatggtgacg 961
to top
>gb|AC122333.2| Mus musculus BAC clone RP23-346J12 from chromosome 6, complete sequence
          Length = 174665

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 69     ctacaaaagaaaataaaatcaa 90
              ||||||||||||||||||||||
Sbjct: 160722 ctacaaaagaaaataaaatcaa 160701
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 161     ccgcgttcccggcggcgacccgcgcc 186
               |||||||| |||||||||||||||||
Sbjct: 3150184 ccgcgttctcggcggcgacccgcgcc 3150159
to top
>gb|AC026226.9| Homo sapiens chromosome 10 clone RP11-81B10, complete sequence
          Length = 158556

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 85     aatcaagcaatttgtgttttgcaact 110
              |||||||||||||||||||| |||||
Sbjct: 137586 aatcaagcaatttgtgtttttcaact 137611
to top
>gb|AC090127.11| Mus musculus chromosome 6, clone RP23-128D23, complete sequence
          Length = 212404

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 73     aaaagaaaataaaatcaagcaa 94
              ||||||||||||||||||||||
Sbjct: 211372 aaaagaaaataaaatcaagcaa 211393
to top
>gb|AC140501.5| Mus musculus BAC clone RP23-178E11 from chromosome 6, complete sequence
          Length = 45554

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 69    ctacaaaagaaaataaaatcaa 90
             ||||||||||||||||||||||
Sbjct: 19812 ctacaaaagaaaataaaatcaa 19833
to top
>gb|AC090563.17| Mus musculus chromosome 6, clone RP23-451F7, complete sequence
          Length = 199986

 Score = 44.1 bits (22), Expect = 0.36
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 73     aaaagaaaataaaatcaagcaa 94
              ||||||||||||||||||||||
Sbjct: 161767 aaaagaaaataaaatcaagcaa 161746
to top
>gb|AC141325.1| Pan troglodytes BAC clone RP43-168D7 from 7, complete sequence
          Length = 195031

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 24    tctcagcttctctccaacttc 44
             |||||||||||||||||||||
Sbjct: 61465 tctcagcttctctccaacttc 61445
to top
>gb|AC156496.10| Mus musculus chromosome 7, clone RP24-246N21, complete sequence
          Length = 143815

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 84    aaatcaagcaatttgtgtttt 104
             |||||||||||||||||||||
Sbjct: 63835 aaatcaagcaatttgtgtttt 63855
to top
>gb|AC136833.3| Rattus norvegicus 1 BAC CH230-184E24 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 186074

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 76     agaaaataaaatcaagcaatt 96
              |||||||||||||||||||||
Sbjct: 138994 agaaaataaaatcaagcaatt 138974
to top
>emb|BX571885.7| Mouse DNA sequence from clone RP23-17O21 on chromosome 4 Contains a
            glyceraldehyde-3-phosphate dehydrogenase (Gapd)
            pseudogene, a novel gene and the 3' end of a novel gene,
            complete sequence
          Length = 218922

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  tcctccaacacattcttgaga 222
            |||||||||||||||||||||
Sbjct: 1800 tcctccaacacattcttgaga 1820
to top
>emb|BX682543.5| Mouse DNA sequence from clone RP23-56I16 on chromosome 4, complete
            sequence
          Length = 4561

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 202  tcctccaacacattcttgaga 222
            |||||||||||||||||||||
Sbjct: 4361 tcctccaacacattcttgaga 4381
to top
>gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320C8, complete sequence
          Length = 185386

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 108   actaatcaaatatcagtgtat 128
             |||||||||||||||||||||
Sbjct: 60083 actaatcaaatatcagtgtat 60063
to top
>gb|AF423072.1|AF423072 Homo sapiens signal transducer and activator of transcription 4 (STAT4)
             gene, partial cds
          Length = 52796

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 70    tacaaaagaaaataaaatcaa 90
             |||||||||||||||||||||
Sbjct: 46837 tacaaaagaaaataaaatcaa 46857
to top
>gb|AC073572.19|AC073572 Homo sapiens 12 BAC RP5-901N10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 103331

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 48    aaaactttgaaactttacattctac 72
             |||||||||| ||||||||||||||
Sbjct: 89937 aaaactttgatactttacattctac 89913
to top
>gb|AC073225.5| Homo sapiens BAC clone RP11-611G1 from 2, complete sequence
          Length = 153688

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 68    tctacaaaagaaaataaaatcaagcaatt 96
             |||||||||||||| ||||||||| ||||
Sbjct: 49856 tctacaaaagaaaaaaaaatcaagaaatt 49828
to top
>gb|AC067945.4| Homo sapiens BAC clone RP11-629B4 from 2, complete sequence
          Length = 162471

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 70     tacaaaagaaaataaaatcaa 90
              |||||||||||||||||||||
Sbjct: 108297 tacaaaagaaaataaaatcaa 108277
to top
>gb|AC007938.1|AC007938 Homo sapiens clone RP11-2E11 from 7q31, complete sequence
          Length = 167237

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 24    tctcagcttctctccaacttc 44
             |||||||||||||||||||||
Sbjct: 68240 tctcagcttctctccaacttc 68260
to top
>emb|BX649499.11| Zebrafish DNA sequence from clone DKEY-60A16 in linkage group 20,
             complete sequence
          Length = 201391

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 46    aaaaaactttgaaactttaca 66
             |||||||||||||||||||||
Sbjct: 60228 aaaaaactttgaaactttaca 60208
to top
>gb|AC005551.1|AC005551 Homo sapiens chromosome 19, cosmid R26529, complete sequence
          Length = 42416

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 71    acaaaagaaaataaaatcaag 91
             |||||||||||||||||||||
Sbjct: 14573 acaaaagaaaataaaatcaag 14553
to top
>dbj|AB209043.1| Homo sapiens mRNA for signal transducer and activator of
            transcription 4 variant protein
          Length = 1827

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 70   tacaaaagaaaataaaatcaa 90
            |||||||||||||||||||||
Sbjct: 1798 tacaaaagaaaataaaatcaa 1818
to top
>emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on chromosome 11, complete
              sequence
          Length = 205668

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 108    actaatcaaatatcagtgtat 128
              |||||||||||||||||||||
Sbjct: 145063 actaatcaaatatcagtgtat 145043
to top
>gb|AY714813.1| Cercopithecine herpesvirus 2, complete genome
          Length = 150715

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 349    aggcggcggggcacgccctccttgacga 376
              ||||||||||| |||||||||| |||||
Sbjct: 121084 aggcggcgggggacgccctcctggacga 121057



 Score = 40.1 bits (20), Expect = 5.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 349  aggcggcggggcacgccctccttgacga 376
            ||||||||||| |||||||||| |||||
Sbjct: 2446 aggcggcgggggacgccctcctggacga 2473
to top
>ref|XM_508557.1| PREDICTED: Pan troglodytes similar to pecanex-like 3 (LOC451327),
            mRNA
          Length = 9952

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 8415 cccggcggcgacccgcgccc 8396
to top
>gb|AC008031.6| Trypanosoma brucei chromosome 2 clone RPCI93-25N14, complete sequence
          Length = 151499

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    tacaaaagaaaataaaatca 89
             ||||||||||||||||||||
Sbjct: 71299 tacaaaagaaaataaaatca 71318
to top
>gb|AE017150.2| Trypanosoma brucei chromosome 2, complete sequence
          Length = 1193948

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     tacaaaagaaaataaaatca 89
              ||||||||||||||||||||
Sbjct: 427398 tacaaaagaaaataaaatca 427379
to top
>gb|AC150847.5| Bos taurus  BAC CH240-372I17 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 134331

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    aatcaagcaatttgtgtttt 104
             ||||||||||||||||||||
Sbjct: 55307 aatcaagcaatttgtgtttt 55288
to top
>gb|BC010492.1| Homo sapiens signal-induced proliferation-associated gene 1,
            transcript variant 2, mRNA (cDNA clone MGC:17037
            IMAGE:3048253), complete cds
          Length = 3473

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 1906 cccggcggcgacccgcgccc 1887
to top
>emb|Z81127.1|CET22G5 Caenorhabditis elegans Cosmid T22G5, complete sequence
          Length = 22254

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 82  taaaatcaagcaatttgtgttttg 105
           |||||||||| |||||||||||||
Sbjct: 844 taaaatcaagaaatttgtgttttg 867
to top
>gb|AC121920.3| Mus musculus BAC clone RP24-196F6 from chromosome 7, complete sequence
          Length = 159469

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     acaaaagaaaataaaatcaagcaa 94
              ||||||||||||| ||||||||||
Sbjct: 141394 acaaaagaaaatataatcaagcaa 141371
to top
>gb|AC098587.5| Homo sapiens BAC clone RP11-231C18 from 4, complete sequence
          Length = 132164

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 73    aaaagaaaataaaatcaagc 92
             ||||||||||||||||||||
Sbjct: 88441 aaaagaaaataaaatcaagc 88460
to top
>gb|AC125353.2| Mus musculus BAC clone RP23-455B17 from 6, complete sequence
          Length = 171963

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 63     tacattctacaaaagaaaataaaa 86
              ||||||| ||||||||||||||||
Sbjct: 108508 tacattcaacaaaagaaaataaaa 108531
to top
>gb|AC102551.8| Mus musculus chromosome 16, clone RP23-154N19, complete sequence
          Length = 232454

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 78     aaaataaaatcaagcaattt 97
              ||||||||||||||||||||
Sbjct: 157965 aaaataaaatcaagcaattt 157946
to top
>gb|AC113270.8| Mus musculus chromosome 7, clone RP23-375O10, complete sequence
          Length = 175280

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    acaaaagaaaataaaatcaagcaa 94
             ||||||||||||| ||||||||||
Sbjct: 21362 acaaaagaaaatataatcaagcaa 21339
to top
>ref|XM_725230.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY02442)
            partial mRNA
          Length = 9570

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   aaataaaatcaagcaatttg 98
            ||||||||||||||||||||
Sbjct: 2307 aaataaaatcaagcaatttg 2326
to top
>ref|XM_739362.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000422.03.0)
            partial mRNA
          Length = 4140

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 79   aaataaaatcaagcaatttg 98
            ||||||||||||||||||||
Sbjct: 2304 aaataaaatcaagcaatttg 2323
to top
>ref|XM_673431.1| Plasmodium berghei strain ANKA hypothetical protein (PB001619.02.0)
           partial mRNA
          Length = 840

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 78  aaaataaaatcaagcaattt 97
           ||||||||||||||||||||
Sbjct: 652 aaaataaaatcaagcaattt 671
to top
>gb|AC117598.7| Mus musculus chromosome 1, clone RP23-398H16, complete sequence
          Length = 196300

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 71     acaaaagaaaataaaatcaagcaa 94
              |||||| |||||||||||||||||
Sbjct: 140018 acaaaacaaaataaaatcaagcaa 139995
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>emb|Z83851.17|HS989H11 Human DNA sequence from clone CTA-989H11 on chromosome 22q13.1-13.2,
            complete sequence
          Length = 118831

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 68   tctacaaaagaaaataaaat 87
            ||||||||||||||||||||
Sbjct: 4529 tctacaaaagaaaataaaat 4548
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>emb|AL450026.10| Human DNA sequence from clone RP11-439A18 on chromosome 9 Contains the
             5' UTR of a variant of a novel gene (MGC20553) and a CpG
             island, complete sequence
          Length = 84632

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tacaaaagaaaataaaatca 89
             ||||||||||||||||||||
Sbjct: 40558 tacaaaagaaaataaaatca 40539
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>emb|AL049637.43|HSJ850O15 Human DNA sequence from clone RP5-850O15 on chromosome 1p32.3-34.2
             Contains the DMRTA2 gene for DMRT-like family A2, the 3'
             end of the FAF1 gene for Fas (TNFRSF6) associated factor
             1, a novel gene and three CpG islands, complete sequence
          Length = 111799

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaaataaaatcaagcaattt 97
             ||||||||||||||||||||
Sbjct: 78161 aaaataaaatcaagcaattt 78142
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>emb|Z49705.1|SC8520X S.cerevisiae chromosome XIII cosmid 8520
          Length = 41200

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tacaaaagaaaataaaatca 89
             ||||||||||||||||||||
Sbjct: 10765 tacaaaagaaaataaaatca 10746
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>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12
          Length = 347050

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     acaaaagaaaataaaatcaa 90
              ||||||||||||||||||||
Sbjct: 280085 acaaaagaaaataaaatcaa 280104
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>gb|AC094527.7| Rattus norvegicus 5 BAC CH230-4L11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 216616

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 70     tacaaaagaaaataaaatca 89
              ||||||||||||||||||||
Sbjct: 104943 tacaaaagaaaataaaatca 104924
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>ref|NM_204918.1| Gallus gallus tight junction protein 2 (zona occludens 2) (TJP2),
            mRNA
          Length = 4438

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  tatcagtgtatgcacctccc 137
            ||||||||||||||||||||
Sbjct: 2929 tatcagtgtatgcacctccc 2910
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>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence
          Length = 198687

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 66    attctacaaaagaaaataaa 85
             ||||||||||||||||||||
Sbjct: 70752 attctacaaaagaaaataaa 70771
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>gb|AC063953.13| Homo sapiens 3 BAC RP11-317I15 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 185259

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     gaaaataaaatcaagcaatt 96
              ||||||||||||||||||||
Sbjct: 160588 gaaaataaaatcaagcaatt 160569
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>gb|AF433946.1| Myoprocta pratti isolate K13 growth hormone receptor (GHR) gene,
           partial cds
          Length = 805

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 gagcttgttctgcagcccca 247
           ||||||||||||||||||||
Sbjct: 707 gagcttgttctgcagcccca 688
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>gb|AF433945.1| Myoprocta acouchy isolate H5837 growth hormone receptor (GHR) gene,
           partial cds
          Length = 805

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 gagcttgttctgcagcccca 247
           ||||||||||||||||||||
Sbjct: 707 gagcttgttctgcagcccca 688
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>gb|AF433944.1| Myoprocta acouchy isolate H5836 growth hormone receptor (GHR) gene,
           partial cds
          Length = 805

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 gagcttgttctgcagcccca 247
           ||||||||||||||||||||
Sbjct: 707 gagcttgttctgcagcccca 688
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>gb|AF433942.1| Dasyprocta punctata isolate NK14094 growth hormone receptor (GHR)
           gene, partial cds
          Length = 805

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 gagcttgttctgcagcccca 247
           ||||||||||||||||||||
Sbjct: 707 gagcttgttctgcagcccca 688
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>dbj|AK136850.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330132N09 product:unclassifiable, full
            insert sequence
          Length = 3508

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 71   acaaaagaaaataaaatcaagcaa 94
            |||||| |||||||||||||||||
Sbjct: 2374 acaaaacaaaataaaatcaagcaa 2351
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>emb|BX511180.7| Zebrafish DNA sequence from clone CH211-221H1 in linkage group 3,
             complete sequence
          Length = 155448

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    caaaagaaaataaaatcaag 91
             ||||||||||||||||||||
Sbjct: 23002 caaaagaaaataaaatcaag 23021
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 326      cgaggaactgcaccctggtgccga 349
                ||||||||||||||| ||||||||
Sbjct: 26250096 cgaggaactgcaccccggtgccga 26250073
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>gb|AC154637.2| Mus musculus BAC clone RP23-303N14 from chromosome 14, complete
             sequence
          Length = 198799

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 68    tctacaaaagaaaataaaat 87
             ||||||||||||||||||||
Sbjct: 51880 tctacaaaagaaaataaaat 51899
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>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete
             sequence
          Length = 80413

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 66    attctacaaaagaaaataaa 85
             ||||||||||||||||||||
Sbjct: 17884 attctacaaaagaaaataaa 17865
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>gb|BC021857.1| Homo sapiens, clone IMAGE:4994346, mRNA
          Length = 2398

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 274  atcctgcccaggtccttgcc 293
            ||||||||||||||||||||
Sbjct: 1497 atcctgcccaggtccttgcc 1478
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>emb|BX649608.7| Zebrafish DNA sequence from clone CH211-117L17 in linkage group 18,
              complete sequence
          Length = 169649

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 99     tgttttgcaactaatcaaatatca 122
              |||||| |||||||||||||||||
Sbjct: 133785 tgttttccaactaatcaaatatca 133808
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>dbj|AP007207.1| Mus musculus molossinus genomic DNA, chromosome 1 clone:MSMg01-122K03,
             complete sequence
          Length = 173324

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 71    acaaaagaaaataaaatcaagcaa 94
             |||||| |||||||||||||||||
Sbjct: 76045 acaaaacaaaataaaatcaagcaa 76022
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>gb|AC150477.3| Monodelphis domestica clone VMRC6-470J24, complete sequence
          Length = 60867

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aactttgaaactttacattc 69
             ||||||||||||||||||||
Sbjct: 44476 aactttgaaactttacattc 44495
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>dbj|AP005453.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0453H04
          Length = 175047

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 326    cgaggaactgcaccctggtgccga 349
              ||||||||||||||| ||||||||
Sbjct: 114636 cgaggaactgcaccccggtgccga 114613
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>emb|AL671865.11| Mouse DNA sequence from clone RP23-312B13 on chromosome X, complete
              sequence
          Length = 226471

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 71     acaaaagaaaataaaatcaa 90
              ||||||||||||||||||||
Sbjct: 121074 acaaaagaaaataaaatcaa 121055
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>gb|AC129885.3| Didelphis virginiana clone LB3-35M17, complete sequence
          Length = 164861

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 50    aactttgaaactttacattc 69
             ||||||||||||||||||||
Sbjct: 89987 aactttgaaactttacattc 90006
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>dbj|AK066545.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013069A19, full
            insert sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 326  cgaggaactgcaccctggtgccga 349
            ||||||||||||||| ||||||||
Sbjct: 1161 cgaggaactgcaccccggtgccga 1138
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>gb|AF085184.1|AF085184 Gallus gallus tight junction protein (ZO-2) mRNA, complete cds
          Length = 4438

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 118  tatcagtgtatgcacctccc 137
            ||||||||||||||||||||
Sbjct: 2929 tatcagtgtatgcacctccc 2910
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>gb|AF052237.1|HSIPA1G6 Homo sapiens GTPase-activating protein (SIPA1) gene, exons 7, 8,
           and 9
          Length = 1881

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 168 cccggcggcgacccgcgccc 187
           ||||||||||||||||||||
Sbjct: 678 cccggcggcgacccgcgccc 659
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>gb|AF029789.1|AF029789 Homo sapiens GTPase-activating protein (SIPA1) mRNA, complete cds
          Length = 3490

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 1937 cccggcggcgacccgcgccc 1918
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>emb|BX897734.11| Zebrafish DNA sequence from clone CH211-194J14, complete sequence
          Length = 151729

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    tacattctacaaaagaaaataaaa 86
             |||||| |||||||||||||||||
Sbjct: 70873 tacattttacaaaagaaaataaaa 70896
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>emb|CT010568.14| Mouse DNA sequence from clone RP23-290F22 on chromosome 16, complete
             sequence
          Length = 203101

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 78    aaaataaaatcaagcaattt 97
             ||||||||||||||||||||
Sbjct: 36560 aaaataaaatcaagcaattt 36541
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>emb|CT485787.6| Mouse DNA sequence from clone RP23-412N8 on chromosome 14, complete
              sequence
          Length = 210837

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 68     tctacaaaagaaaataaaat 87
              ||||||||||||||||||||
Sbjct: 123135 tctacaaaagaaaataaaat 123154
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>gb|BC110353.1| Homo sapiens cDNA clone MGC:102688 IMAGE:5223107, complete cds
          Length = 3536

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 1924 cccggcggcgacccgcgccc 1905
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>ref|NM_006747.2| Homo sapiens signal-induced proliferation-associated gene 1 (SIPA1),
            transcript variant 2, mRNA
          Length = 3511

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 1938 cccggcggcgacccgcgccc 1919
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>ref|NM_153253.28| Homo sapiens signal-induced proliferation-associated gene 1 (SIPA1),
            transcript variant 1, mRNA
          Length = 3657

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 2084 cccggcggcgacccgcgccc 2065
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>gb|DP000023.1| Didelphis virginiana target 1 genomic scaffold
          Length = 1751794

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     aactttgaaactttacattc 69
              ||||||||||||||||||||
Sbjct: 717266 aactttgaaactttacattc 717285
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>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold
          Length = 1833844

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 50     aactttgaaactttacattc 69
              ||||||||||||||||||||
Sbjct: 823401 aactttgaaactttacattc 823420
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>gb|J04965.1|HUMRNAPII Human RNA polymerase II 23kD subunit (POLR2) mRNA, complete cds
          Length = 1212

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 345  gccgaggcggcggggcacgc 364
            ||||||||||||||||||||
Sbjct: 1072 gccgaggcggcggggcacgc 1053
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>dbj|AB005666.1| Homo sapiens mRNA for GTPase-activating protein, complete cds
          Length = 3885

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 168  cccggcggcgacccgcgccc 187
            ||||||||||||||||||||
Sbjct: 2084 cccggcggcgacccgcgccc 2065
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>dbj|AP001362.5| Homo sapiens genomic DNA, chromosome 11, clone:RP11-856B14, complete
              sequence
          Length = 211382

 Score = 40.1 bits (20), Expect = 5.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 168    cccggcggcgacccgcgccc 187
              ||||||||||||||||||||
Sbjct: 127433 cccggcggcgacccgcgccc 127414


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,170,578
Number of Sequences: 3902068
Number of extensions: 4170578
Number of successful extensions: 117131
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116655
Number of HSP's gapped (non-prelim): 466
length of query: 416
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 394
effective length of database: 17,147,199,772
effective search space: 6755996710168
effective search space used: 6755996710168
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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