ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart50b10 |
|---|---|
| Clone Library Name | barley_pub |
>DHSB_YEAST (P21801) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 266 Score = 33.5 bits (75), Expect = 0.16 Identities = 16/46 (34%), Positives = 25/46 (54%) Frame = -1 Query: 142 LPPGAFPRRTTAIL*SAQAALSVICLFECLLCGVCFTTCCVVRTYW 5 L +FP+ T +L S + + L+EC+LC C T+C +YW Sbjct: 151 LQRSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSC---PSYW 193
>CRCB2_BACLD (Q65LX3) Protein crcB homolog 2| Length = 132 Score = 28.1 bits (61), Expect = 6.5 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = -1 Query: 130 AFPRRTTAIL*SAQAALSVICLFECLLCGVCFTTCCVV 17 AF + T +L SA A + V+ L L CGVCF +V Sbjct: 78 AFSKETVLLLQSA-AHIGVLYLMASLACGVCFAFLGIV 114
>DHSB_USTMA (P32420) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 295 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 192 LYECILCACCSTSC---PSYW 209
>DHSB_HUMAN (P21912) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 280 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 183 LYECILCACCSTSC---PSYW 200
>DHSB_CANGA (Q6FWS8) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 253 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 163 LYECILCACCSTSC---PSYW 180
>DHSB_RICPR (Q9ZEA1) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 168 LYECILCACCSTSC---PSYW 185
>DHSB_RICCN (Q92JJ8) Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1)| Length = 261 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 168 LYECILCACCSTSC---PSYW 185
>DHSB_MOUSE (Q9CQA3) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) Length = 282 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 185 LYECILCACCSTSC---PSYW 202
>DHSB_CAEEL (Q09545) Putative succinate dehydrogenase [ubiquinone] iron-sulfur| protein, mitochondrial precursor (EC 1.3.5.1) (IP) (IP subunit of complex II) Length = 298 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 197 LYECILCACCSTSC---PSYW 214
>DHSB_SCHPO (P21911) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 252 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 162 LYECILCACCSTSC---PSYW 179
>DHSB_RAT (P21913) Succinate dehydrogenase [ubiquinone] iron-sulfur protein| (EC 1.3.5.1) (Ip) (Iron-sulfur subunit of complex II) (Fragment) Length = 143 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 77 LYECILCACCSTSC---PSYW 94
>DHSB_MYCGR (O42772) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 206 LYECILCACCSTSC---PSYW 223
>DHSB_DROME (P21914) Succinate dehydrogenase [ubiquinone] iron-sulfur protein,| mitochondrial precursor (EC 1.3.5.1) (IP) Length = 297 Score = 27.7 bits (60), Expect = 8.5 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -1 Query: 67 LFECLLCGVCFTTCCVVRTYW 5 L+EC+LC C T+C +YW Sbjct: 192 LYECILCACCSTSC---PSYW 209 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,461,454 Number of Sequences: 219361 Number of extensions: 276098 Number of successful extensions: 961 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 907 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 961 length of database: 80,573,946 effective HSP length: 45 effective length of database: 70,702,701 effective search space used: 1696864824 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
