>DHRS3_MOUSE (O88876) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 216 FTGLNLRLEMAFPKLKPEAVSEYAVHADSEDPGML 320
           F G+ +R    FP LKPE V+   V A  ++  +L
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVDAVQQNQALL 261

>IGA1B_STRPN (Q54875) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1|
            protease) (IgA-specific zinc metalloproteinase)
          Length = 1927

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 94   QQSFKDATEPSVQFSLTTINNSDKL 168
            Q +FKD T+P  ++   TINN D+L
Sbjct: 1845 QVTFKDPTKPWPRYGTKTINNVDEL 1869

>SPTN5_HUMAN (Q9NRC6) Spectrin beta chain, brain 4 (Spectrin, non-erythroid beta|
           chain 4) (Beta-V spectrin) (BSPECV)
          Length = 3674

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 312 RDLHCQRAPHI-LTRLLASVSGKPFPALGSNP*RIQIRENSKYAMMFL 172
           R+L+ + A  I L RLL  +SG+  P       R+   ENS  A+ FL
Sbjct: 78  RNLYTELADGIHLLRLLELISGEALPPPSRGRLRVHFLENSSRALAFL 125

>PCDB6_PANTR (Q5DRC8) Protocadherin beta 6 precursor (PCDH-beta6)|
          Length = 794

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = -3

Query: 158 LLFIVVRLNCTEGSVASLKLCCVGVTMIKQHLIDV 54
           LLF+ VRL C     AS+  C V      +HL+DV
Sbjct: 704 LLFVAVRL-CRRSRAASVGRCSVPEGPFPEHLVDV 737

>WNK4_RAT (Q7TPK6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 325 PRSMPGSSLSACTAY-SDTASGFSFGKAISSLRFKPVK 215
           PRS PGS  S   +Y SD ASG S       +R  PVK
Sbjct: 625 PRSGPGSDFSPGDSYASDAASGLSDMGEGGQMRKNPVK 662

>WNK4_MOUSE (Q80UE6) Serine/threonine-protein kinase WNK4 (EC 2.7.11.1)|
           (Protein kinase with no lysine 4) (Protein kinase,
           lysine-deficient 4)
          Length = 1222

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -1

Query: 325 PRSMPGSSLSACTAY-SDTASGFSFGKAISSLRFKPVK 215
           PRS PGS  S   +Y SD ASG S       +R  PVK
Sbjct: 625 PRSGPGSDFSPGDSYASDAASGLSDMGEGGQMRKNPVK 662

>YPJI_ECOLI (P58095) Hypothetical protein ypjI|
          Length = 90

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 203 LIWILYGFEPKAGNGFPETEARSRVR 280
           ++W  + FEP AG GF     RS +R
Sbjct: 59  MVWRAWNFEPDAGEGFNRYIHRSGIR 84

>DHRS3_HUMAN (O75911) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1) (DD83.1)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 216 FTGLNLRLEMAFPKLKPEAVSEYAVHA 296
           F G+ +R    FP LKPE V+   V A
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVEA 253

>DHRS3_BOVIN (O77769) Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-)|
           (Retinal short-chain dehydrogenase/reductase 1)
           (retSDR1)
          Length = 302

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +3

Query: 216 FTGLNLRLEMAFPKLKPEAVSEYAVHA 296
           F G+ +R    FP LKPE V+   V A
Sbjct: 227 FQGMRVRFPNLFPPLKPETVARRTVEA 253

>IGA1_STRR6 (Q59947) Immunoglobulin A1 protease precursor (EC 3.4.24.13) (IgA1|
            protease) (IgA-specific zinc metalloproteinase)
          Length = 1963

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = +1

Query: 94   QQSFKDATEPSVQFSLTTINNSDKL 168
            Q +FKD T+P   +   TINN D+L
Sbjct: 1884 QVTFKDPTKPWPSYGTKTINNVDEL 1908


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,785,477
Number of Sequences: 219361
Number of extensions: 762896
Number of successful extensions: 1684
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1684
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)