>ref|XM_478653.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1352

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 274 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 333
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 334 ggtggagcacgtcctc 349
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 201 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 258
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926

>dbj|AK109507.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-E04, full
           insert sequence
          Length = 1351

 Score =  111 bits (56), Expect = 2e-21
 Identities = 71/76 (93%)
 Strand = Plus / Minus

                                                                       
Query: 274 atcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacag 333
           ||||||||||||| ||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 911 atcaagtatccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcacag 852

                           
Query: 334 ggtggagcacgtcctc 349
           |||| ||||| |||||
Sbjct: 851 ggtgcagcacttcctc 836



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 201 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggacat 258
           |||||| |||| |||||| || |||||| |||||||||||||||||| || |||||||
Sbjct: 983 tagcacccagcaaacagttgactgctagaacctttacatgctggatcaaagaggacat 926

>ref|XM_478654.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 273 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 332
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 333 gggtggagcacgtcctc 349
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                            
Query: 273      aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 332
                |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 21844121 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 21844180

                                 
Query: 333      gggtggagcacgtcctc 349
                ||||| ||||| |||||
Sbjct: 21844181 gggtgcagcacttcctc 21844197



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                           
Query: 201      tagcactcagccaacagtcgaatgctaggacctttacatgctg 243
                |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 21841655 tagcacccagcaaacagttgactgctagaacctttacatgctg 21841697

>dbj|AK060720.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-F04, full
           insert sequence
          Length = 1330

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Minus

                                                                       
Query: 273 aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 332
           |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 867 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 808

                            
Query: 333 gggtggagcacgtcctc 349
           ||||| ||||| |||||
Sbjct: 807 gggtgcagcacttcctc 791

>dbj|AP005126.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0041B22
          Length = 142446

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 70/77 (90%)
 Strand = Plus / Plus

                                                                         
Query: 273   aatcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcaca 332
             |||||| || |||| ||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 57797 aatcaattacccttgtgctcttcagtggcgtcatggtactcggcatcctcctctggcaca 57856

                              
Query: 333   gggtggagcacgtcctc 349
             ||||| ||||| |||||
Sbjct: 57857 gggtgcagcacttcctc 57873



 Score = 46.1 bits (23), Expect = 0.087
 Identities = 38/43 (88%)
 Strand = Plus / Plus

                                                        
Query: 201   tagcactcagccaacagtcgaatgctaggacctttacatgctg 243
             |||||| |||| |||||| || |||||| ||||||||||||||
Sbjct: 55331 tagcacccagcaaacagttgactgctagaacctttacatgctg 55373

>gb|AY104756.1| Zea mays PCO067622 mRNA sequence
          Length = 637

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 75/87 (86%)
 Strand = Plus / Minus

                                                                       
Query: 275 tcaagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacagg 334
           ||||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| ||
Sbjct: 420 tcaagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacggg 361

                                      
Query: 335 gtggagcacgtcctctgcaccaaccgc 361
           ||| ||||| ||||| |||||||||||
Sbjct: 360 gtgcagcacatcctcagcaccaaccgc 334



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 51/56 (91%)
 Strand = Plus / Minus

                                                                   
Query: 201 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 256
           |||||| ||||||||||||||||||||| |||| ||||||||| |||||| |||||
Sbjct: 496 tagcacccagccaacagtcgaatgctagaacctctacatgctgaatccaagaggac 441

>gb|BT016476.1| Zea mays clone Contig309 mRNA sequence
          Length = 1258

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Plus

                                                                   
Query: 201 tagcactcagccaacagtcgaatgctaggacctttacatgctggatccaacaggac 256
           |||||| ||||||||||||||||||||  |||| ||||||||| |||||| |||||
Sbjct: 261 tagcacccagccaacagtcgaatgctaaaacctctacatgctgaatccaagaggac 316



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 72/86 (83%)
 Strand = Plus / Plus

                                                                       
Query: 276 caagtatccttatgctcctcagcggcgtcatggtactcggcatcctcctctggcacaggg 335
           |||| |||||| |||||||| || ||||||||||||||| | || ||||| ||||| |||
Sbjct: 338 caagcatccttgtgctcctccgcagcgtcatggtactcgccttcttcctccggcacgggg 397

                                     
Query: 336 tggagcacgtcctctgcaccaaccgc 361
            | || || ||||| |||||||||||
Sbjct: 398 ggcagaacatcctcagcaccaaccgc 423

>gb|AC169511.1| Mus musculus BAC clone RP23-81P24 from chromosome 14, complete sequence
          Length = 252587

 Score = 46.1 bits (23), Expect = 0.087
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 77    atccaataagcacaaaagttcta 99
             |||||||||||||||||||||||
Sbjct: 66495 atccaataagcacaaaagttcta 66473

>gb|AC118610.9| Mus musculus chromosome 6, clone RP23-178I17, complete sequence
          Length = 255673

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 257    attgatgcatggatccaatcaa 278
              ||||||||||||||||||||||
Sbjct: 225438 attgatgcatggatccaatcaa 225417

>gb|AC121356.10| Mus musculus chromosome 6, clone RP23-52D17, complete sequence
          Length = 178055

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 257    attgatgcatggatccaatcaa 278
              ||||||||||||||||||||||
Sbjct: 169507 attgatgcatggatccaatcaa 169528

>gb|AC140437.3| Mus musculus BAC clone RP23-88N2 from chromosome 8, complete sequence
          Length = 171402

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 132    gaagcacagatagacataaaacagtaaaa 160
              |||||||||||| ||||||||||| ||||
Sbjct: 168468 gaagcacagatacacataaaacagaaaaa 168496

>gb|AC126012.22| Medicago truncatula clone mth2-27p4, complete sequence
          Length = 108900

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 3    caaaaccaaataaatatagca 23
            |||||||||||||||||||||
Sbjct: 8758 caaaaccaaataaatatagca 8778

>gb|AC141110.7| Medicago truncatula clone mth2-17i10, complete sequence
          Length = 113345

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 3     caaaaccaaataaatatagca 23
             |||||||||||||||||||||
Sbjct: 63980 caaaaccaaataaatatagca 64000

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 253     ggacattgatgcatggatcca 273
               |||||||||||||||||||||
Sbjct: 7643376 ggacattgatgcatggatcca 7643356

>gb|AC175664.2| Mus musculus BAC clone RP24-391A3 from chromosome 8, complete sequence
          Length = 168189

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 132    gaagcacagatagacataaaacagtaaaa 160
              |||||||||||| ||||||||||| ||||
Sbjct: 135611 gaagcacagatacacataaaacagaaaaa 135583

>dbj|AP004751.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0494D11
          Length = 149198

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 253   ggacattgatgcatggatcca 273
             |||||||||||||||||||||
Sbjct: 68571 ggacattgatgcatggatcca 68551

>gb|AC102505.8| Mus musculus chromosome 1, clone RP24-73K7, complete sequence
          Length = 209838

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 188    agaaaccccgaggtagcactcagc 211
              |||||||||||| |||||||||||
Sbjct: 148229 agaaaccccgagttagcactcagc 148252

>ref|XM_536036.2| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 1 (LOC478876), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 tggaagcacagatagacata 149
           ||||||||||||||||||||
Sbjct: 703 tggaagcacagatagacata 722

>ref|XM_854196.1| PREDICTED: Canis familiaris similar to WD-repeat protein 12 (YTM1
           homolog), transcript variant 3 (LOC478876), mRNA
          Length = 1035

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 130 tggaagcacagatagacata 149
           ||||||||||||||||||||
Sbjct: 379 tggaagcacagatagacata 398

>gb|AC133890.16| Mus musculus chromosome 10, clone RP23-339N24, complete sequence
          Length = 211758

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 1      agcaaaaccaaataaatata 20
              ||||||||||||||||||||
Sbjct: 142959 agcaaaaccaaataaatata 142978

>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence
          Length = 110572

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 104    acaaatgttcaccaaataca 123
              ||||||||||||||||||||
Sbjct: 103064 acaaatgttcaccaaataca 103083

>emb|AL139375.18| Human DNA sequence from clone RP11-138N13 on chromosome 13q21.33-22.3,
              complete sequence
          Length = 146708

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    gtaaaagtctaacaaacagc 174
              ||||||||||||||||||||
Sbjct: 116776 gtaaaagtctaacaaacagc 116795

>gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 135514

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 117    aaatacatcagagtggaagcacag 140
              |||||||||||| |||||||||||
Sbjct: 121799 aaatacatcagattggaagcacag 121822

>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence
          Length = 3354505

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    atcagagtggaagcacagat 142
              ||||||||||||||||||||
Sbjct: 525304 atcagagtggaagcacagat 525323

>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 115     ccaaatacatcagagtggaa 134
               ||||||||||||||||||||
Sbjct: 1387432 ccaaatacatcagagtggaa 1387413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,736,593
Number of Sequences: 3902068
Number of extensions: 3736593
Number of successful extensions: 75270
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75166
Number of HSP's gapped (non-prelim): 104
length of query: 403
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 381
effective length of database: 17,147,199,772
effective search space: 6533083113132
effective search space used: 6533083113132
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)