Clone Information

BLAST Search Result

Clone Name	rbart50b06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleo...	33	0.17
2	TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase ...	30	1.1
3	KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-as...	30	1.9
4	ITA2B_HUMAN (P08514) Integrin alpha-IIb precursor (Platelet memb...	30	1.9
5	HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)	29	2.5
6	FLCN_XENTR (Q5M7Q1) Folliculin	29	2.5
7	NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2	29	2.5
8	ITA2B_MOUSE (Q9QUM0) Integrin alpha-IIb precursor (Platelet memb...	29	2.5
9	PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-b...	29	3.2
10	CLCE_ARATH (Q8GX93) Chloride channel protein CLC-e (AtCLC-e)	29	3.2
11	KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-as...	29	3.2
12	PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-b...	29	3.2
13	CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity fact...	28	4.2
14	UBQL3_HUMAN (Q9H347) Ubiquilin-3	28	4.2
15	IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B ...	28	4.2
16	CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity fa...	28	4.2
17	CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity fa...	28	4.2
18	JHD1_ASHGO (Q75AL5) JmjC domain-containing histone demethylation...	28	4.2
19	CPB1_CAEJA (Q6E3C7) Cytoplasmic polyadenylation element-binding ...	28	5.5
20	TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K ...	28	5.5
21	LIN11_CAEEL (P20154) Protein lin-11 (Abnormal cell lineage prote...	28	5.5
22	VPS64_YEAST (Q03944) Vacuolar protein sorting protein 64 (Factor...	28	7.2
23	PCSK7_RAT (Q62849) Proprotein convertase subtilisin/kexin type 7...	28	7.2
24	NFKB2_HUMAN (Q00653) Nuclear factor NF-kappa-B p100 subunit (DNA...	28	7.2
25	FLCN_RAT (Q76JQ2) Folliculin (Birt-Hogg-Dube syndrome protein ho...	28	7.2
26	FLCN_MOUSE (Q8QZS3) Folliculin	28	7.2
27	FLCN_HUMAN (Q8NFG4) Folliculin (Birt-Hogg-Dube syndrome protein)...	28	7.2
28	FLCN_BOVIN (Q3B7L5) Folliculin	28	7.2
29	CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)	28	7.2
30	HIS6_PHOLL (Q7N6I5) Imidazole glycerol phosphate synthase subuni...	28	7.2
31	GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate...	28	7.2
32	DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-re...	28	7.2
33	R3HD1_HUMAN (Q15032) R3H domain-containing protein 1	27	9.4
34	TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase ...	27	9.4
35	PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor t...	27	9.4
36	PCSK7_MOUSE (Q61139) Proprotein convertase subtilisin/kexin type...	27	9.4
37	YGIV_ECOLI (Q46866) Hypothetical protein ygiV	27	9.4
38	SCD5_YEAST (P34758) Protein SCD5 (Protein FTB1)	27	9.4
39	CRIP3_HUMAN (Q6Q6R5) Cysteine-rich protein 3 (CRP3) (Chromosome ...	27	9.4

>NU214_HUMAN (P35658) Nuclear pore complex protein Nup214 (Nucleoporin Nup214)|
            (214 kDa nucleoporin) (CAN protein)
          Length = 2090

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 20/63 (31%), Positives = 30/63 (47%)
 Frame = -1

Query: 350  AAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGM 171
            ++G G VA QG       +T GFG+ P+  + P   G+P  G  +   G A   +S +G 
Sbjct: 1948 SSGGGSVASQGFGFSSPNKTGGFGAAPVFGSPPTFGGSPGFG-GVPAFGSAPAFTSPLGS 2006

Query: 170  ALG 162
              G
Sbjct: 2007 TGG 2009

to top

>TGM1_MOUSE (Q9JLF6) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 815

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
 Frame = -3

Query: 348 GRVRWCRWAGACS-GGRGADDWIWQPT 271
           GR  W R  G CS G RG DDW  +P+
Sbjct: 43  GRSFWARCCGCCSCGNRGDDDWGPEPS 69

to top

>KR108_HUMAN (P60410) Keratin-associated protein 10-8 (Keratin-associated|
           protein 10.8) (High sulfur keratin-associated protein
           10.8) (Keratin-associated protein 18-8)
           (Keratin-associated protein 18.8)
          Length = 259

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/58 (32%), Positives = 25/58 (43%), Gaps = 7/58 (12%)
 Frame = +2

Query: 173 CQWQS*HPAQLRCQASCIHASAHR-------CRMGCCPPMVGCQIQSSAPRPPLHAPA 325
           CQ  S  PA   C  SC   S+         CR  CC P+  C + +S+ +P    PA
Sbjct: 188 CQKSSCQPAC--CTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCVPASSCQPSCCHPA 243

to top

>ITA2B_HUMAN (P08514) Integrin alpha-IIb precursor (Platelet membrane|
           glycoprotein IIb) (GPalpha IIb) (GPIIb) (CD41 antigen)
           [Contains: Integrin alpha-IIb heavy chain; Integrin
           alpha-IIb light chain]
          Length = 1039

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
 Frame = -1

Query: 350 AAGFGGVAGQGHAVEDVGQTIGFGSQP-LVDNSPYDSGAPKHGCSLLG 210
           AA +GG +G+G  +  +GQ+ G  S+P  V +SP+ +G+   G SL G
Sbjct: 408 AAPYGGPSGRGQVLVFLGQSEGLRSRPSQVLDSPFPTGS-AFGFSLRG 454

to top

>HMCT_BOMMO (P98092) Hemocytin precursor (Humoral lectin)|
          Length = 3133

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = -3

Query: 303 RGADDWIWQPTIGGQQPIRQRCAEAWMQLAWHRSCAGCQLCHWHGPRSLICVRALLRRC 127
           RG  D +  P +G    +   CA+  + L W  +   C+L    G +  +C  + LR+C
Sbjct: 2   RGGRDPVPVPVLGDYAMV---CAKNGIILQWRYNVKECELSCTGGQQYTVCADSCLRKC 57

to top

>FLCN_XENTR (Q5M7Q1) Folliculin|
          Length = 579

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 192 CQLCHWHGPRSLICVRAL 139
           C  C  HGPR+L C  AL
Sbjct: 8   CHFCELHGPRTLFCTEAL 25

to top

>NUPL2_BRARE (Q6P0U9) Nucleoporin-like 2|
          Length = 414

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 21/63 (33%), Positives = 24/63 (38%)
 Frame = -1

Query: 356 PEAAGFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAI 177
           P A GFG  +G        GQ  GFGS           G+     S  G G + G  SA 
Sbjct: 301 PSAGGFGSASGFSFKTATAGQGSGFGS---------GFGSSSGFGSSSGFGSSSGFGSAF 351

Query: 176 GMA 168
           G A
Sbjct: 352 GSA 354

to top

>ITA2B_MOUSE (Q9QUM0) Integrin alpha-IIb precursor (Platelet membrane|
           glycoprotein IIb) (GPalpha IIb) (GPIIb) (CD41 antigen)
           [Contains: Integrin alpha-IIb heavy chain; Integrin
           alpha-IIb light chain]
          Length = 1033

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = -1

Query: 350 AAGFGGVAGQGHAVEDVGQTIGFGSQP-LVDNSPYDSGAPKHGCSLLG 210
           AA +GG +GQG  +  +GQ+ G   +P  V +SP+ +G+   G SL G
Sbjct: 407 AAPYGGPSGQGQVLIFLGQSEGLSPRPSQVLDSPFPTGS-GFGFSLRG 453

to top

>PCGF2_HUMAN (P35227) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144)
          Length = 344

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +1

Query: 130 TPQERTHTNQRPRAMPMAELTPS-------ATPMPSKLHPCFGAPLSYGLLSTNGWLPNP 288
           TP E T+T+       +++  PS       ++ +PS   P  G+P S+G  +T+   P P
Sbjct: 243 TPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSPTP 302

to top

>CLCE_ARATH (Q8GX93) Chloride channel protein CLC-e (AtCLC-e)|
          Length = 710

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/63 (28%), Positives = 30/63 (47%)
 Frame = -1

Query: 326 GQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSAIGMALGL*FVC 147
           G G+++   G ++  G+      +   + +P+ G SLL  G A G+SS    A+   F  
Sbjct: 182 GTGNSLGPEGPSVEIGASIAKGVNSLFNKSPQTGFSLLAAGSAAGISSGFNAAVAGCFFA 241

Query: 146 VRS 138
           V S
Sbjct: 242 VES 244

to top

>KR104_HUMAN (P60372) Keratin-associated protein 10-4 (Keratin-associated|
           protein 10.4) (High sulfur keratin-associated protein
           10.4) (Keratin-associated protein 18-4)
           (Keratin-associated protein 18.4)
          Length = 401

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 7/58 (12%)
 Frame = +2

Query: 173 CQWQS*HPAQLRCQASCIHASAHR-------CRMGCCPPMVGCQIQSSAPRPPLHAPA 325
           CQ  S  PA   C  SC   S+         CR  CC P+  C   +S+ +P    PA
Sbjct: 340 CQQSSCQPAC--CTTSCCRPSSSVSLLCRPVCRPACCVPVPSCCAPTSSCQPSCCRPA 395

to top

>PCGF2_MOUSE (P23798) Polycomb group RING finger protein 2 (DNA-binding protein|
           Mel-18) (RING finger protein 110) (Zinc finger protein
           144) (Zfp-144)
          Length = 342

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 7/60 (11%)
 Frame = +1

Query: 130 TPQERTHTNQRPRAMPMAELTPS-------ATPMPSKLHPCFGAPLSYGLLSTNGWLPNP 288
           TP E T+T+       +++  PS       ++ +PS   P  G+P S+G  +T+   P P
Sbjct: 243 TPSEGTNTSGASECESVSDKAPSPATLPATSSSLPSPATPSHGSPSSHGPPATHPTSPTP 302

to top

>CPSF7_RAT (Q5XI29) Cleavage and polyadenylation specificity factor 7|
          Length = 462

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 133 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 243
           P    + N+ P A+P+  L P   P P  L   FG P
Sbjct: 210 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 246

to top

>UBQL3_HUMAN (Q9H347) Ubiquilin-3|
          Length = 655

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
 Frame = +1

Query: 136 QERTHTNQRPRA-MPMAELTPSATPMPSKLHPCFGAP-LSYGLLS 264
           Q R   N+ P A +P    +P + P PS ++P  G P  S GLL+
Sbjct: 94  QHRAMGNECPAASVPTQGPSPGSLPQPSSIYPADGPPAFSLGLLT 138

to top

>IF2P_YEAST (P39730) Eukaryotic translation initiation factor 5B (eIF-5B)|
           (Translation initiation factor IF-2)
          Length = 1002

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +1

Query: 136 QERTHTNQRPRAMPMAELTPSATPMPSKLHP 228
           +ER H ++  ++ P A  TP+ATP PS   P
Sbjct: 370 EERAHVHEVAKSTPAA--TPAATPTPSSASP 398

to top

>CPSF7_MOUSE (Q8BTV2) Cleavage and polyadenylation specificity factor 7|
          Length = 471

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 133 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 243
           P    + N+ P A+P+  L P   P P  L   FG P
Sbjct: 219 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 255

to top

>CPSF7_HUMAN (Q8N684) Cleavage and polyadenylation specificity factor 7|
           (Cleavage and polyadenylation specificity factor 59 kDa
           subunit) (CPSF 59 kDa subunit) (Pre-mRNA cleavage factor
           Im 59-kDa subunit)
          Length = 471

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 13/37 (35%), Positives = 17/37 (45%)
 Frame = +1

Query: 133 PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFGAP 243
           P    + N+ P A+P+  L P   P P  L   FG P
Sbjct: 219 PSVLPYFNRPPSALPLMGLPPPPIPPPPPLSSSFGVP 255

to top

>JHD1_ASHGO (Q75AL5) JmjC domain-containing histone demethylation protein 1 (EC|
           1.14.11.-)
          Length = 486

 Score = 28.5 bits (62), Expect = 4.2
 Identities = 18/76 (23%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
 Frame = +2

Query: 38  LSMIETTLHNTSLADCA-RNNKKKFEKSSAPQRRKSARTQIRDRGPCQWQS*HPAQLRCQ 214
           ++  E + H T+ A  A +  +++ E    P+R  + R ++R RGP  + + +  Q    
Sbjct: 75  IAAFECSAHGTARARLALKGKRRRVEAKEEPERAGTRRYRLRKRGPLDYIALNEGQ---D 131

Query: 215 ASCIHASAHRCRMGCC 262
               H   HR     C
Sbjct: 132 VRLRHEHPHRAAFQGC 147

to top

>CPB1_CAEJA (Q6E3C7) Cytoplasmic polyadenylation element-binding protein 1|
          Length = 617

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
 Frame = +2

Query: 215 ASCIHASAHRCRMGCCPPMVGCQIQSSA-PRPPLHAPAQRHHRTLP 349
           A C + + HR       PMV    Q+   PRPP H+ +  HHR+ P
Sbjct: 518 AMCDNRADHR-------PMVRTGDQTRILPRPPHHSTSHYHHRSTP 556

to top

>TGM1_RAT (P23606) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 824

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/27 (48%), Positives = 15/27 (55%), Gaps = 1/27 (3%)
 Frame = -3

Query: 348 GRVRWCRWAGACS-GGRGADDWIWQPT 271
           GR  W R  G CS G R  DDW  +P+
Sbjct: 42  GRSFWARCCGCCSCGNRADDDWGPEPS 68

to top

>LIN11_CAEEL (P20154) Protein lin-11 (Abnormal cell lineage protein 11)|
          Length = 405

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/36 (36%), Positives = 16/36 (44%)
 Frame = -3

Query: 258 QPIRQRCAEAWMQLAWHRSCAGCQLCHWHGPRSLIC 151
           QPI  R     +   WH+SC  C  C    P S+ C
Sbjct: 73  QPILDRYVFTVLGKCWHQSCLRC--CDCRAPMSMTC 106

to top

>VPS64_YEAST (Q03944) Vacuolar protein sorting protein 64 (Factor arrest protein|
           9)
          Length = 604

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 15/40 (37%), Positives = 19/40 (47%)
 Frame = +1

Query: 19  SESLRGAQHDRNHTSQHIPG*LRQKXXXXXXXXXSATTPQ 138
           S ++ G + DR H +QHIP     K         SATT Q
Sbjct: 322 STNINGIKIDRGHHNQHIPIRSHLKENYTEAGVTSATTAQ 361

to top

>PCSK7_RAT (Q62849) Proprotein convertase subtilisin/kexin type 7 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC7)
           (Subtilisin/kexin-like protease PC7) (Prohormone
           convertase PC7) (rPC7)
          Length = 783

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 209 CQASCIHASAHRCRMGCCP 265
           C +    AS H CR GCCP
Sbjct: 686 CLSQRSKASTHGCRRGCCP 704

to top

>NFKB2_HUMAN (Q00653) Nuclear factor NF-kappa-B p100 subunit (DNA-binding factor|
           KBF2) (H2TF1) (Lymphocyte translocation chromosome 10)
           (Oncogene Lyt-10) (Lyt10) [Contains: Nuclear factor
           NF-kappa-B p52 subunit]
          Length = 899

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/41 (43%), Positives = 21/41 (51%)
 Frame = -1

Query: 344 GFGGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGC 222
           G GG AG G+     G ++GF    L   SPY SGA   GC
Sbjct: 359 GSGGAAG-GYGGAGGGGSLGFFPSSLA-YSPYQSGAGPMGC 397

to top

>FLCN_RAT (Q76JQ2) Folliculin (Birt-Hogg-Dube syndrome protein homolog)|
          Length = 579

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 192 CQLCHWHGPRSLICVRAL 139
           C  C  HGPR+L C   L
Sbjct: 8   CHFCELHGPRTLFCTEVL 25

to top

>FLCN_MOUSE (Q8QZS3) Folliculin|
          Length = 579

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 192 CQLCHWHGPRSLICVRAL 139
           C  C  HGPR+L C   L
Sbjct: 8   CHFCELHGPRTLFCTEVL 25

to top

>FLCN_HUMAN (Q8NFG4) Folliculin (Birt-Hogg-Dube syndrome protein) (BHD skin|
           lesion fibrofolliculoma protein)
          Length = 579

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 192 CQLCHWHGPRSLICVRAL 139
           C  C  HGPR+L C   L
Sbjct: 8   CHFCELHGPRTLFCTEVL 25

to top

>FLCN_BOVIN (Q3B7L5) Folliculin|
          Length = 579

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 192 CQLCHWHGPRSLICVRAL 139
           C  C  HGPR+L C   L
Sbjct: 8   CHFCELHGPRTLFCTEVL 25

to top

>CLCF_ARATH (Q8RXR2) Chloride channel protein CLC-f (AtCLC-f)|
          Length = 781

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -1

Query: 338 GGVAGQGHAVEDVGQTIGFGSQPLVDNSPYDSGAPKHGCSLLGIGVALGVSSA 180
           GG     H+V+D     GF  + L D++P +      GC    IGVA G+  A
Sbjct: 98  GGGISNLHSVDDRNDEYGFDEEVLGDSAPPEWALLLIGCL---IGVAAGICVA 147

to top

>HIS6_PHOLL (Q7N6I5) Imidazole glycerol phosphate synthase subunit hisF (EC|
           4.1.3.-) (IGP synthase cyclase subunit) (IGP synthase
           subunit hisF) (ImGP synthase subunit hisF) (IGPS subunit
           hisF)
          Length = 258

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 13/27 (48%), Positives = 16/27 (59%)
 Frame = -1

Query: 332 VAGQGHAVEDVGQTIGFGSQPLVDNSP 252
           VAG    VED GQ + FG+  +  NSP
Sbjct: 79  VAGGIKTVEDAGQILSFGADKISINSP 105

to top

>GLNA_CRIGR (P04773) Glutamine synthetase (EC 6.3.1.2) (Glutamate--ammonia|
           ligase) (GS)
          Length = 372

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = +1

Query: 154 NQRPRAMPMAELTPSATPMPSKLHPCFGAPLSYGLLSTNG 273
           NQ+P    +         M S  HP FG    Y LL T+G
Sbjct: 104 NQKPAETNLRHTCKRIMDMVSNQHPWFGMEQEYTLLGTDG 143

to top

>DIAP2_HUMAN (O60879) Protein diaphanous homolog 2 (Diaphanous-related formin-2)|
           (DRF2)
          Length = 1101

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 20/71 (28%), Positives = 31/71 (43%)
 Frame = +2

Query: 101 KKFEKSSAPQRRKSARTQIRDRGPCQWQS*HPAQLRCQASCIHASAHRCRMGCCPPMVGC 280
           KKF++    ++   A  Q RD    + ++    QLR QA  + +S+        PP+ G 
Sbjct: 502 KKFDEEFTARQEAQAELQKRDEKIKELEA-EIQQLRTQAQVLSSSSGIPGPPAAPPLPGV 560

Query: 281 QIQSSAPRPPL 313
                 P PPL
Sbjct: 561 GPPPPPPAPPL 571

to top

>R3HD1_HUMAN (Q15032) R3H domain-containing protein 1|
          Length = 1099

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 13/47 (27%), Positives = 20/47 (42%)
 Frame = +1

Query: 148 HTNQRPRAMPMAELTPSATPMPSKLHPCFGAPLSYGLLSTNGWLPNP 288
           H    P   P     P   P+P+  +P  G P+S  +L   G++  P
Sbjct: 592 HPPPPPPPPPPPPPLPPGQPVPTAGYPASGHPVSQPVLQQQGYIQQP 638

to top

>TGM1_CANFA (Q9GLK0) Protein-glutamine gamma-glutamyltransferase K (EC|
           2.3.2.13) (Transglutaminase K) (TGase K) (TGK) (TG(K))
           (Transglutaminase-1) (Epidermal TGase)
          Length = 815

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 1/39 (2%)
 Frame = -3

Query: 354 RSGRVRWCRWAGACS-GGRGADDWIWQPTIGGQQPIRQR 241
           R GR  W R  G CS   R  DDW       G +P R R
Sbjct: 38  RGGRSFWARCCGCCSCRNRADDDW-------GPEPHRDR 69

to top

>PTN23_MOUSE (Q6PB44) Tyrosine-protein phosphatase non-receptor type 23 (EC|
            3.1.3.48)
          Length = 1692

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +1

Query: 133  PQERTHTNQRPRAMPMAELTPSATPMPSKLHPCFG 237
            PQ +     +P+  P ++  P   P P    P FG
Sbjct: 989  PQPQPQPQPQPQPQPQSQSQPQPQPQPQPQRPAFG 1023

to top

>PCSK7_MOUSE (Q61139) Proprotein convertase subtilisin/kexin type 7 precursor|
           (EC 3.4.21.-) (Proprotein convertase PC7)
           (Subtilisin/kexin-like protease PC7) (Prohormone
           convertase PC7) (Subtilisin-like proprotein convertase
           7) (SPC7)
          Length = 770

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = +2

Query: 209 CQASCIHASAHRCRMGCCP 265
           C +    AS H CR GCCP
Sbjct: 686 CLSQRNKASTHGCRKGCCP 704

to top

>YGIV_ECOLI (Q46866) Hypothetical protein ygiV|
          Length = 160

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
 Frame = +3

Query: 168 GHANGRADTQRNSDAKQAASMLRRTAVVWAVVHQWLAA---KSNRLPHVLHCMPLPSDTT 338
           G +NG     R + A+    +   +  VW ++  WL A   K  + P + H   L    T
Sbjct: 88  GVSNGELTGGRYAVARHVGELDDISHTVWGIIRHWLPASGEKMRKAPILFHYTNLAEGVT 147

Query: 339 E 341
           E
Sbjct: 148 E 148

to top

>SCD5_YEAST (P34758) Protein SCD5 (Protein FTB1)|
          Length = 872

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 24/93 (25%), Positives = 37/93 (39%)
 Frame = +2

Query: 53   TTLHNTSLADCARNNKKKFEKSSAPQRRKSARTQIRDRGPCQWQS*HPAQLRCQASCIHA 232
            ++  NTS    A NN +  +     Q+++  + +I      Q Q  HP QL    S IH+
Sbjct: 756  SSFQNTS---AAMNNTQSHQTYIQQQQQQQTQQRIYGGQLSQMQQ-HPGQLHLNNSDIHS 811

Query: 233  SAHRCRMGCCPPMVGCQIQSSAPRPPLHAPAQR 331
              ++   G     V  Q Q    + P  A   R
Sbjct: 812  QPNKPNYGMLGQQVHQQQQQQQQQFPFTADVNR 844

to top

>CRIP3_HUMAN (Q6Q6R5) Cysteine-rich protein 3 (CRP3) (Chromosome 6 LIM-only|
           protein) (h6LIMo)
          Length = 217

 Score = 27.3 bits (59), Expect = 9.4
 Identities = 12/22 (54%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
 Frame = -3

Query: 237 AEAWMQLA--WHRSCAGCQLCH 178
           AE  M L   WHR C  CQ CH
Sbjct: 134 AEKVMSLGRNWHRPCLRCQRCH 155


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,018,074
Number of Sequences: 219361
Number of extensions: 1167517
Number of successful extensions: 4863
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 4471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4850
length of database: 80,573,946
effective HSP length: 95
effective length of database: 59,734,651
effective search space used: 1433631624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result