ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds 462 e-127
2gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, com... 72 1e-09
3gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Canc... 44 0.31
4gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 42 1.2
5gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.2
6emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA 42 1.2
7emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA 42 1.2
8emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA 42 1.2
9emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA 42 1.2
10emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA 42 1.2
11emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA 42 1.2
12emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA 42 1.2
13emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA 42 1.2
14emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA 42 1.2
15emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA 42 1.2
16emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA 42 1.2
17emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA 42 1.2
18emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA 42 1.2
19emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA 42 1.2
20emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA 42 1.2
21emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA 42 1.2
22emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA 42 1.2
23emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 i... 42 1.2
24gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, comple... 42 1.2
25dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.2
26emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in... 42 1.2
27gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 42 1.2
28emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in... 42 1.2
29gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Can... 40 4.9
30gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosom... 40 4.9
31gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124... 40 4.9
32gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome ... 40 4.9
33gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosom... 40 4.9
34emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in... 40 4.9
35gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell... 40 4.9
36emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 i... 40 4.9
37gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, r... 40 4.9
38gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Canc... 40 4.9
39gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosom... 40 4.9
40emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, ... 40 4.9
41emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 i... 40 4.9
42gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55... 40 4.9
43gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 ... 40 4.9
44emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on ch... 40 4.9
45gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 4.9
46emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chr... 40 4.9
47gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, compl... 40 4.9
48gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosom... 40 4.9 
>dbj|AB009308.2| Hordeum vulgare HvPIP1;3 mRNA, complete cds
          Length = 1285

 Score =  462 bits (233), Expect = e-127
 Identities = 247/249 (99%), Gaps = 2/249 (0%)
 Strand = Plus / Minus

                                                                        
Query: 50   aattcgatcgtcgtcccttctt-aataataatttacatacatatgcacgctggattaaat 108
            |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1285 aattcgatcgtcgtcccttctttaataataatttacatacatatgcacgctggattaaat 1226

                                                                        
Query: 109  ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1225 ggcgtgcgtggtactggtacaatgcaaaaggtagggaaagtagtacagcaggtactatac 1166

                                                                        
Query: 169  tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1165 tgactgaaactcgcagacttgaacaggcgacgctgccggcaggcacacacaccgaggaga 1106

                                                                        
Query: 229  gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacg-tacgcgc 287
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1105 gacggcagatttgagaactattacagcgtgcgcggccgagacacgatccacgttacgcgc 1046

                     
Query: 288  gcaccagca 296
            |||||||||
Sbjct: 1045 gcaccagca 1037



 Score =  103 bits (52), Expect = 4e-19
 Identities = 52/52 (100%)
 Strand = Plus / Minus

                                                                
Query: 314  atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagac 365
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 atgatcggtcgacgatgaacagcgataagattccatccatggccgcccagac 968
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>gb|AF366564.1| Triticum aestivum aquaporin PIP1 (Pip1) mRNA, complete cds
          Length = 1248

 Score = 71.9 bits (36), Expect = 1e-09
 Identities = 64/72 (88%), Gaps = 1/72 (1%)
 Strand = Plus / Minus

                                                                        
Query: 46   aattaattcgatcgtcgtcccttcttaat-aataatttacatacatatgcacgctggatt 104
            |||||| ||||||| ||| |||||||||| |||||||||||||||||||||||||   ||
Sbjct: 1248 aattaactcgatcgacgttccttcttaattaataatttacatacatatgcacgctccgtt 1189

                        
Query: 105  aaatggcgtgcg 116
            |||| |||||||
Sbjct: 1188 aaatcgcgtgcg 1177



 Score = 61.9 bits (31), Expect = 1e-06
 Identities = 34/35 (97%)
 Strand = Plus / Minus

                                               
Query: 314  atgatcggtcgacgatgaacagcgataagattcca 348
            ||||||| |||||||||||||||||||||||||||
Sbjct: 1007 atgatcgatcgacgatgaacagcgataagattcca 973



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 32/33 (96%)
 Strand = Plus / Minus

                                             
Query: 197  gacgctgccggcaggcacacacaccgaggagag 229
            ||||||| |||||||||||||||||||||||||
Sbjct: 1111 gacgctgtcggcaggcacacacaccgaggagag 1079



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 176  aactcgcagacttgaacagg 195
            ||||||||||||||||||||
Sbjct: 1142 aactcgcagacttgaacagg 1123
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>gb|AC155942.6| Mus musculus 10 BAC RP24-492L7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 174309

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 71    taataataatttacatacatat 92
             ||||||||||||||||||||||
Sbjct: 29491 taataataatttacatacatat 29512
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>gb|AC153156.1| Ornithorhynchus anatinus chromosome UNK clone OABb-289A1, complete
             sequence
          Length = 109794

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 76    ataatttacatacatatgcac 96
             |||||||||||||||||||||
Sbjct: 95031 ataatttacatacatatgcac 95011
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>gb|AC104706.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_F05,
             complete sequence
          Length = 119573

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 71    taataataatttacatacatatgca 95
             ||||||||| |||||||||||||||
Sbjct: 27479 taataataacttacatacatatgca 27503
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>emb|CR702474.2|CNS0G4ZA Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR702005.2|CNS0G4M9 Tetraodon nigroviridis full-length cDNA
          Length = 970

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR701878.2|CNS0G4IQ Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 30  gggaaagtagtacagcaggta 10
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>emb|CR700458.2|CNS0G3FA Tetraodon nigroviridis full-length cDNA
          Length = 965

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR698963.2|CNS0G29R Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR697642.2|CNS0G192 Tetraodon nigroviridis full-length cDNA
          Length = 961

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 56  gggaaagtagtacagcaggta 36
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>emb|CR696608.2|CNS0G0GC Tetraodon nigroviridis full-length cDNA
          Length = 967

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 62  gggaaagtagtacagcaggta 42
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>emb|CR694961.2|CNS0FZ6L Tetraodon nigroviridis full-length cDNA
          Length = 969

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR693847.2|CNS0FYBN Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 63  gggaaagtagtacagcaggta 43
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>emb|CR693583.2|CNS0FY4B Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 63  gggaaagtagtacagcaggta 43
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>emb|CR693474.2|CNS0FY1A Tetraodon nigroviridis full-length cDNA
          Length = 934

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 50  gggaaagtagtacagcaggta 30
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>emb|CR690780.2|CNS0FVYG Tetraodon nigroviridis full-length cDNA
          Length = 967

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 62  gggaaagtagtacagcaggta 42
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>emb|CR689984.2|CNS0FVCC Tetraodon nigroviridis full-length cDNA
          Length = 935

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 30  gggaaagtagtacagcaggta 10
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>emb|CR686426.2|CNS0FSLI Tetraodon nigroviridis full-length cDNA
          Length = 960

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 55  gggaaagtagtacagcaggta 35
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>emb|CR685561.2|CNS0FRXH Tetraodon nigroviridis full-length cDNA
          Length = 961

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 55  gggaaagtagtacagcaggta 35
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>emb|CR685520.2|CNS0FRWC Tetraodon nigroviridis full-length cDNA
          Length = 964

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 64  gggaaagtagtacagcaggta 44
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>emb|CR684429.2|CNS0FR21 Tetraodon nigroviridis full-length cDNA
          Length = 975

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 142 gggaaagtagtacagcaggta 162
           |||||||||||||||||||||
Sbjct: 68  gggaaagtagtacagcaggta 48
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>emb|BX537273.16| Zebrafish DNA sequence from clone CH211-151F2 in linkage group 10,
             complete sequence
          Length = 167226

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    taataataatttacatacata 91
             |||||||||||||||||||||
Sbjct: 60087 taataataatttacatacata 60107
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>gb|AC116631.6| Homo sapiens BAC clone RP11-429B11 from 4, complete sequence
          Length = 125133

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    ataatttacatacatatgcac 96
             |||||||||||||||||||||
Sbjct: 18615 ataatttacatacatatgcac 18635
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 71       taataataatttacatacatatgca 95
                ||||||||| |||||||||||||||
Sbjct: 15861488 taataataacttacatacatatgca 15861464
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>emb|CR361565.8| Zebrafish DNA sequence from clone CH211-242L1 in linkage group 22,
             complete sequence
          Length = 164475

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 72    aataataatttacatacatat 92
             |||||||||||||||||||||
Sbjct: 30255 aataataatttacatacatat 30275
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 194     ggcgacgctgccggcaggcac 214
               |||||||||||||||||||||
Sbjct: 2595820 ggcgacgctgccggcaggcac 2595840
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>emb|BX005014.5| Zebrafish DNA sequence from clone CH211-103E2 in linkage group 10,
             complete sequence
          Length = 160621

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 71    taataataatttacatacata 91
             |||||||||||||||||||||
Sbjct: 47614 taataataatttacatacata 47634
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>gb|AC167201.6| Mus musculus 10 BAC RP23-402J11 (Roswell Park Cancer Institute
             (C57BL/6J Female) Mouse BAC Library) complete sequence
          Length = 216676

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   cagatttgagaactattaca 253
             ||||||||||||||||||||
Sbjct: 46344 cagatttgagaactattaca 46325
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>gb|AC166171.2| Mus musculus BAC clone RP23-136L14 from chromosome 16, complete
             sequence
          Length = 199601

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgcgtggtactggtacaatg 132
             ||||||||||||||||||||
Sbjct: 64904 tgcgtggtactggtacaatg 64885
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>gb|AC117081.2| Dictyostelium discoideum chromosome 2 map 5862124-6045772 strain AX4,
            complete sequence
          Length = 183648

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   taataataatttacatacat 90
            ||||||||||||||||||||
Sbjct: 3763 taataataatttacatacat 3744
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>gb|AC122907.4| Mus musculus BAC clone RP23-49I4 from chromosome 15, complete sequence
          Length = 233904

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 70     ttaataataatttacatacatatg 93
              ||||||||||| ||||||||||||
Sbjct: 205619 ttaataataatatacatacatatg 205596
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>gb|AC160125.2| Mus musculus BAC clone RP23-317M11 from chromosome 9, complete sequence
          Length = 209835

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tgcgtggtactggtacaatg 132
              ||||||||||||||||||||
Sbjct: 199385 tgcgtggtactggtacaatg 199366
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>emb|BX511098.5| Zebrafish DNA sequence from clone CH211-202L3 in linkage group 5,
             complete sequence
          Length = 72481

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    ttcttaataataatttacat 86
             ||||||||||||||||||||
Sbjct: 25089 ttcttaataataatttacat 25108
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>gb|AC104511.5| Drosophila melanogaster X BAC RP98-39D14 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 166000

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     taataataatttacatacat 90
              ||||||||||||||||||||
Sbjct: 100924 taataataatttacatacat 100943
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>emb|BX004760.10| Zebrafish DNA sequence from clone CH211-222O4 in linkage group 3,
             complete sequence
          Length = 190220

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    taataataatttacatacat 90
             ||||||||||||||||||||
Sbjct: 69241 taataataatttacatacat 69260
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>gb|AC011763.6|AC011763 Drosophila melanogaster, chromosome 3R, region 90A-90A, BAC clone
              BACR48C05, complete sequence
          Length = 164450

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tacatacatatgcacgctgg 101
              ||||||||||||||||||||
Sbjct: 141958 tacatacatatgcacgctgg 141939
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>gb|AC160029.3| Mus musculus 10 BAC RP24-105I7 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 184696

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   cagatttgagaactattaca 253
             ||||||||||||||||||||
Sbjct: 18168 cagatttgagaactattaca 18187
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>gb|AC155299.2| Mus musculus BAC clone RP24-229D17 from chromosome 15, complete
             sequence
          Length = 198559

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    ttaataataatttacatacatatg 93
             ||||||||||| ||||||||||||
Sbjct: 83579 ttaataataatatacatacatatg 83602
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>emb|AL929213.5| Zebrafish DNA sequence from clone CH211-144A19, complete sequence
          Length = 169897

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    ttcttaataataatttacat 86
             ||||||||||||||||||||
Sbjct: 69809 ttcttaataataatttacat 69790
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>emb|BX255893.5| Zebrafish DNA sequence from clone CH211-272H10 in linkage group 4,
             complete sequence
          Length = 99176

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    taataataatttacatacat 90
             ||||||||||||||||||||
Sbjct: 76094 taataataatttacatacat 76075
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>gb|AE003717.2| Drosophila melanogaster chromosome 3R, section 55 of 118 of the complete
              sequence
          Length = 217725

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     tacatacatatgcacgctgg 101
              ||||||||||||||||||||
Sbjct: 123669 tacatacatatgcacgctgg 123650
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>gb|AE003491.4| Drosophila melanogaster chromosome X, section 43 of 74 of the complete
             sequence
          Length = 332030

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    taataataatttacatacat 90
             ||||||||||||||||||||
Sbjct: 23638 taataataatttacatacat 23619
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>emb|CT030124.12| Mouse DNA sequence from clone RP23-100B15 on chromosome 9, complete
              sequence
          Length = 203615

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tgcgtggtactggtacaatg 132
              ||||||||||||||||||||
Sbjct: 196039 tgcgtggtactggtacaatg 196058
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 189     gaacaggcgacgctgccggc 208
               ||||||||||||||||||||
Sbjct: 1380459 gaacaggcgacgctgccggc 1380478
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>emb|BX005187.9| Mouse DNA sequence from clone RP23-187O10 on chromosome X, complete
             sequence
          Length = 98612

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgcgtggtactggtacaatg 132
             ||||||||||||||||||||
Sbjct: 32191 tgcgtggtactggtacaatg 32172
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>gb|AC144628.3| Mus musculus BAC clone RP23-463L22 from 14, complete sequence
          Length = 174162

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 113   tgcgtggtactggtacaatg 132
             ||||||||||||||||||||
Sbjct: 50679 tgcgtggtactggtacaatg 50660
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>gb|AC127297.4| Mus musculus BAC clone RP23-395B13 from chromosome 3, complete sequence
          Length = 222889

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 127   acaatgcaaaaggtagggaa 146
             ||||||||||||||||||||
Sbjct: 94243 acaatgcaaaaggtagggaa 94262


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,960,495
Number of Sequences: 3902068
Number of extensions: 2960495
Number of successful extensions: 67149
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67017
Number of HSP's gapped (non-prelim): 130
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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