ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50b03
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK099455.1| Oryza sativa (japonica cultivar-group) cDNA clon... 250 3e-63
2dbj|AB037152.1| Oryza sativa (japonica cultivar-group) OsRPN11 m... 250 3e-63
3dbj|AK109403.2| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
4dbj|AK112020.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
5dbj|AK111763.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 1e-62
6ref|NM_188020.1| Oryza sativa (japonica cultivar-group), Ozsa844... 246 4e-62
7gb|BT009132.1| Triticum aestivum clone wl1n.pk0036.c3:fis, full ... 240 3e-60
8gb|AY104261.1| Zea mays PCO099067 mRNA sequence 240 3e-60
9dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
10dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic D... 210 2e-51
11gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome... 204 1e-49
12dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 204 1e-49
13gb|BT018364.1| Zea mays clone EL01N0311E01.c mRNA sequence 188 9e-45
14emb|AM260494.1| Platanus acerifolia partial mRNA for 26S proteas... 137 3e-29
15gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete s... 123 4e-25
16gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete se... 123 4e-25
17dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone... 107 3e-20
18gb|BT013130.1| Lycopersicon esculentum clone 114422R, mRNA sequence 94 4e-16
19ref|NM_122261.2| Arabidopsis thaliana unknown protein AT5G23540 ... 82 1e-12
20gb|AY230845.1| Arabidopsis thaliana 26S proteasome subunit RPN11... 82 1e-12
21gb|AY230844.1| Arabidopsis thaliana 26S proteasome subunit RPN11... 82 1e-12
22gb|AY230843.1| Arabidopsis thaliana 26S proteasome subunit RPN11... 82 1e-12
23gb|AY091329.1| Arabidopsis thaliana putative 26S proteasome, non... 82 1e-12
24gb|AY070073.1| Arabidopsis thaliana putative 26S proteasome, non... 82 1e-12
25emb|BX829732.1|CNS0A1XY Arabidopsis thaliana Full-length cDNA Co... 82 1e-12
26gb|AY086277.1| Arabidopsis thaliana clone 23276 mRNA, complete s... 82 1e-12
27dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, ... 82 1e-12
28gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8... 52 0.001
29emb|BX830953.1|CNS09YRU Arabidopsis thaliana Full-length cDNA Co... 48 0.020
30gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 geno... 46 0.079
31ref|XM_948501.1| Theileria annulata strain Ankara hypothetical p... 40 4.9
32gb|AY792583.1| Potamophila parviflora alcohol dehydrogenase II (... 40 4.9

>dbj|AK099455.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013022M19, full
            insert sequence
          Length = 1220

 Score =  250 bits (126), Expect = 3e-63
 Identities = 195/218 (89%)
 Strand = Plus / Minus

                                                                        
Query: 124  agactaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
            |||||| || ||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct: 1013 agactagaacacaaccgtgtcgagcatggttcctagggtctgaactatgtttgacgacat 954

                                                                        
Query: 184  caaattcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctat 243
            |||||| |||||||||||||| |  |||||||| ||||| |||||||| ||||| || ||
Sbjct: 953  caaatttgagacatgctcttccaagtgcttcttggcatcctgccgtcccacattggcaat 894

                                                                        
Query: 244  cgctaatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggc 303
            ||||| ||||||||| | || |||||||||||| |||||||||||||| || ||||||||
Sbjct: 893  cgctagtttctcaggtggcagctcatcctcctcctgcactgccttgttatatttgatggc 834

                                                  
Query: 304  taggctcagcatttcctgaacagtctgctcattggttt 341
            |||| |||||||||||||||||||||||||||||||||
Sbjct: 833  taggttcagcatttcctgaacagtctgctcattggttt 796



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>dbj|AB037152.1| Oryza sativa (japonica cultivar-group) OsRPN11 mRNA for 26S
           proteasome regulatory particle non-ATPase subunit11,
           complete cds
          Length = 1129

 Score =  250 bits (126), Expect = 3e-63
 Identities = 195/218 (89%)
 Strand = Plus / Minus

                                                                       
Query: 124 agactaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
           |||||| || ||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct: 966 agactagaacacaaccgtgtcgagcatggttcctagggtctgaactatgtttgacgacat 907

                                                                       
Query: 184 caaattcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctat 243
           |||||| |||||||||||||| |  |||||||| ||||| |||||||| ||||| || ||
Sbjct: 906 caaatttgagacatgctcttccaagtgcttcttggcatcctgccgtcccacattggcaat 847

                                                                       
Query: 244 cgctaatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggc 303
           ||||| ||||||||| | || |||||||||||| |||||||||||||| || ||||||||
Sbjct: 846 cgctagtttctcaggtggcagctcatcctcctcctgcactgccttgttatatttgatggc 787

                                                 
Query: 304 taggctcagcatttcctgaacagtctgctcattggttt 341
           |||| |||||||||||||||||||||||||||||||||
Sbjct: 786 taggttcagcatttcctgaacagtctgctcattggttt 749



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>dbj|AK109403.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-D04, full
            insert sequence
          Length = 1212

 Score =  248 bits (125), Expect = 1e-62
 Identities = 212/241 (87%)
 Strand = Plus / Minus

                                                                        
Query: 127  ctaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaa 186
            |||||| ||||| || || |||||||| || || |||||||||||||| || ||||||||
Sbjct: 1004 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 945

                                                                        
Query: 187  attcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgc 246
            ||| |||||||||||||| |  |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 944  attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 885

                                                                        
Query: 247  taatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctag 306
            |||||||||||| | || |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 884  taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 825

                                                                        
Query: 307  gctcagcatttcctgaacagtctgctcattggtttctgaatgtgcgtcaaatttcttcag 366
            | ||||||||||||||||||||||||||||||| | |||||| | ||||||  |||||||
Sbjct: 824  gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 765

             
Query: 367  a 367
            |
Sbjct: 764  a 764



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>dbj|AK112020.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B06, full
            insert sequence
          Length = 1142

 Score =  248 bits (125), Expect = 1e-62
 Identities = 212/241 (87%)
 Strand = Plus / Minus

                                                                        
Query: 127  ctaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaa 186
            |||||| ||||| || || |||||||| || || |||||||||||||| || ||||||||
Sbjct: 1002 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 943

                                                                        
Query: 187  attcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgc 246
            ||| |||||||||||||| |  |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 942  attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 883

                                                                        
Query: 247  taatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctag 306
            |||||||||||| | || |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 882  taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 823

                                                                        
Query: 307  gctcagcatttcctgaacagtctgctcattggtttctgaatgtgcgtcaaatttcttcag 366
            | ||||||||||||||||||||||||||||||| | |||||| | ||||||  |||||||
Sbjct: 822  gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 763

             
Query: 367  a 367
            |
Sbjct: 762  a 762



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>dbj|AK111763.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062E06, full
            insert sequence
          Length = 1115

 Score =  248 bits (125), Expect = 1e-62
 Identities = 212/241 (87%)
 Strand = Plus / Minus

                                                                        
Query: 127  ctaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaa 186
            |||||| ||||| || || |||||||| || || |||||||||||||| || ||||||||
Sbjct: 1001 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 942

                                                                        
Query: 187  attcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgc 246
            ||| |||||||||||||| |  |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 941  attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 882

                                                                        
Query: 247  taatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctag 306
            |||||||||||| | || |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 881  taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 822

                                                                        
Query: 307  gctcagcatttcctgaacagtctgctcattggtttctgaatgtgcgtcaaatttcttcag 366
            | ||||||||||||||||||||||||||||||| | |||||| | ||||||  |||||||
Sbjct: 821  gttcagcatttcctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcag 762

             
Query: 367  a 367
            |
Sbjct: 761  a 761



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>ref|NM_188020.1| Oryza sativa (japonica cultivar-group), Ozsa8440 predicted mRNA
          Length = 924

 Score =  246 bits (124), Expect = 4e-62
 Identities = 187/208 (89%)
 Strand = Plus / Minus

                                                                       
Query: 134 acaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattcgag 193
           ||||||||||| |||||||| || ||||||||||||||||| |||||||||||||| |||
Sbjct: 917 acaaccgtgtcgagcatggttcctagggtctgaactatgtttgacgacatcaaatttgag 858

                                                                       
Query: 194 acatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaatttc 253
           ||||||||||| |  |||||||| ||||| |||||||| ||||| || ||||||| ||||
Sbjct: 857 acatgctcttccaagtgcttcttggcatcctgccgtcccacattggcaatcgctagtttc 798

                                                                       
Query: 254 tcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctcagc 313
           ||||| | || |||||||||||| |||||||||||||| || |||||||||||| |||||
Sbjct: 797 tcaggtggcagctcatcctcctcctgcactgccttgttatatttgatggctaggttcagc 738

                                       
Query: 314 atttcctgaacagtctgctcattggttt 341
           ||||||||||||||||||||||||||||
Sbjct: 737 atttcctgaacagtctgctcattggttt 710



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>gb|BT009132.1| Triticum aestivum clone wl1n.pk0036.c3:fis, full insert mRNA sequence
          Length = 1318

 Score =  240 bits (121), Expect = 3e-60
 Identities = 205/233 (87%)
 Strand = Plus / Minus

                                                                        
Query: 109  aacaacactagtggtagactaaaagacaaccgtgtcaagcatggtccccagggtctgaac 168
            ||||| |||| | ||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1034 aacaatactattagtagactaaaagacaaccgtgtcgagcatggttcctagggtctgaac 975

                                                                        
Query: 169  tatgttcgacgacatcaaattcgagacatgctcttctagatgcttcttcgcatcttgccg 228
            |||||| || |||||||||||||| ||||||||||| | |||||| || |||||||||||
Sbjct: 974  tatgtttgatgacatcaaattcgacacatgctcttccaaatgcttttttgcatcttgccg 915

                                                                        
Query: 229  tccaacattagctatcgctaatttctcaggggacaactcatcctcctcttgcactgcctt 288
             || ||||| |||||||| | ||||||||| | ||  || |||||||| |||||||||||
Sbjct: 914  acccacatttgctatcgcaagtttctcaggaggcagttcgtcctcctcctgcactgcctt 855

                                                                 
Query: 289  gttgtacttgatggctaggctcagcatttcctgaacagtctgctcattggttt 341
            ||||||||||||||||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 854  gttgtacttgatggctaggtttagcatttcctggacagtctgctcgttggttt 802



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>gb|AY104261.1| Zea mays PCO099067 mRNA sequence
          Length = 1282

 Score =  240 bits (121), Expect = 3e-60
 Identities = 205/233 (87%)
 Strand = Plus / Minus

                                                                        
Query: 109  aacaacactagtggtagactaaaagacaaccgtgtcaagcatggtccccagggtctgaac 168
            ||||| |||| | ||||||||||||||||||||||| |||||||| || |||||||||||
Sbjct: 1010 aacaatactattagtagactaaaagacaaccgtgtcgagcatggttcctagggtctgaac 951

                                                                        
Query: 169  tatgttcgacgacatcaaattcgagacatgctcttctagatgcttcttcgcatcttgccg 228
            |||||| || |||||||||||||| ||||||||||| | |||||| || |||||||||||
Sbjct: 950  tatgtttgatgacatcaaattcgacacatgctcttccaaatgcttttttgcatcttgccg 891

                                                                        
Query: 229  tccaacattagctatcgctaatttctcaggggacaactcatcctcctcttgcactgcctt 288
             || ||||| |||||||| | ||||||||| | ||  || |||||||| |||||||||||
Sbjct: 890  acccacatttgctatcgcaagtttctcaggaggcagttcgtcctcctcctgcactgcctt 831

                                                                 
Query: 289  gttgtacttgatggctaggctcagcatttcctgaacagtctgctcattggttt 341
            ||||||||||||||||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 830  gttgtacttgatggctaggtttagcatttcctggacagtctgctcgttggttt 778



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  210 bits (106), Expect = 2e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                           
Query: 124     agactaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
               |||||| || ||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct: 9168660 agactagaacacaaccgtgtcgagcatggttcctagggtctgaactatgtttgacgacat 9168601

                                                                           
Query: 184     caaattcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctat 243
               |||||| |||||||||||||| |  |||||||| ||||| |||||||| ||||| || ||
Sbjct: 9168600 caaatttgagacatgctcttccaagtgcttcttggcatcctgccgtcccacattggcaat 9168541

                                                                           
Query: 244     cgctaatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggc 303
               ||||| ||||||||| | || |||||||||||| |||||||||||||| || ||||||||
Sbjct: 9168540 cgctagtttctcaggtggcagctcatcctcctcctgcactgccttgttatatttgatggc 9168481

                                 
Query: 304     taggctcagcatttcctg 321
               |||| |||||||||||||
Sbjct: 9168480 taggttcagcatttcctg 9168463



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                       
Query: 318     cctgaacagtctgctcattggttt 341
               ||||||||||||||||||||||||
Sbjct: 9168342 cctgaacagtctgctcattggttt 9168319



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>dbj|AP000969.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1,
             clone:P0011D01
          Length = 168655

 Score =  210 bits (106), Expect = 2e-51
 Identities = 175/198 (88%)
 Strand = Plus / Minus

                                                                         
Query: 124   agactaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
             |||||| || ||||||||||| |||||||| || ||||||||||||||||| ||||||||
Sbjct: 69042 agactagaacacaaccgtgtcgagcatggttcctagggtctgaactatgtttgacgacat 68983

                                                                         
Query: 184   caaattcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctat 243
             |||||| |||||||||||||| |  |||||||| ||||| |||||||| ||||| || ||
Sbjct: 68982 caaatttgagacatgctcttccaagtgcttcttggcatcctgccgtcccacattggcaat 68923

                                                                         
Query: 244   cgctaatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggc 303
             ||||| ||||||||| | || |||||||||||| |||||||||||||| || ||||||||
Sbjct: 68922 cgctagtttctcaggtggcagctcatcctcctcctgcactgccttgttatatttgatggc 68863

                               
Query: 304   taggctcagcatttcctg 321
             |||| |||||||||||||
Sbjct: 68862 taggttcagcatttcctg 68845



 Score = 48.1 bits (24), Expect = 0.020
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 318   cctgaacagtctgctcattggttt 341
             ||||||||||||||||||||||||
Sbjct: 68724 cctgaacagtctgctcattggttt 68701



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>gb|AC104707.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1118_F06,
              complete sequence
          Length = 136143

 Score =  204 bits (103), Expect = 1e-49
 Identities = 172/195 (88%)
 Strand = Plus / Minus

                                                                          
Query: 127    ctaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaa 186
              |||||| ||||| || || |||||||| || || |||||||||||||| || ||||||||
Sbjct: 105977 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 105918

                                                                          
Query: 187    attcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgc 246
              ||| |||||||||||||| |  |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 105917 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 105858

                                                                          
Query: 247    taatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctag 306
              |||||||||||| | || |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 105857 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 105798

                             
Query: 307    gctcagcatttcctg 321
              | |||||||||||||
Sbjct: 105797 gttcagcatttcctg 105783



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 318    cctgaacagtctgctcattggtttctgaatgtgcgtcaaatttcttcaga 367
              |||||||||||||||||||||| | |||||| | ||||||  ||||||||
Sbjct: 105689 cctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcaga 105640



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  204 bits (103), Expect = 1e-49
 Identities = 172/195 (88%)
 Strand = Plus / Minus

                                                                            
Query: 127      ctaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaa 186
                |||||| ||||| || || |||||||| || || |||||||||||||| || ||||||||
Sbjct: 17729219 ctaaaatacaactgtatcgagcatggttcctagcgtctgaactatgtttgatgacatcaa 17729160

                                                                            
Query: 187      attcgagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgc 246
                ||| |||||||||||||| |  |||||||| |||||||||||||| ||||| ||||||||
Sbjct: 17729159 attggagacatgctcttccaagtgcttcttagcatcttgccgtcccacatttgctatcgc 17729100

                                                                            
Query: 247      taatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctag 306
                |||||||||||| | || |||||||||||||||||| ||||||||||||||||| || ||
Sbjct: 17729099 taatttctcaggcggcagctcatcctcctcttgcaccgccttgttgtacttgatagcaag 17729040

                               
Query: 307      gctcagcatttcctg 321
                | |||||||||||||
Sbjct: 17729039 gttcagcatttcctg 17729025



 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 318      cctgaacagtctgctcattggtttctgaatgtgcgtcaaatttcttcaga 367
                |||||||||||||||||||||| | |||||| | ||||||  ||||||||
Sbjct: 17728931 cctgaacagtctgctcattggtctttgaatgagtgtcaaacctcttcaga 17728882



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>gb|BT018364.1| Zea mays clone EL01N0311E01.c mRNA sequence
          Length = 603

 Score =  188 bits (95), Expect = 9e-45
 Identities = 189/219 (86%), Gaps = 1/219 (0%)
 Strand = Plus / Minus

                                                                       
Query: 124 agactaaaagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
           ||||||||| ||||||||||| |||||||| || ||||||||||||||||| || |||||
Sbjct: 470 agactaaaatacaaccgtgtcgagcatggttcctagggtctgaactatgtttgatgacat 411

                                                                       
Query: 184 caaattcgagacatgctcttctagatgcttcttcgcatctt-gccgtccaacattagcta 242
           |||||| || ||||||||||| | |||||| || ||||||  |||| || ||||| ||||
Sbjct: 410 caaattggacacatgctcttccaaatgcttttttgcatctccgccgacccacatttgcta 351

                                                                       
Query: 243 tcgctaatttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatgg 302
           | || | ||||||||| | ||  || |||||||| |||||||||||||||||||||||||
Sbjct: 350 tagcaagtttctcaggtggcagttcgtcctcctcctgcactgccttgttgtacttgatgg 291

                                                  
Query: 303 ctaggctcagcatttcctgaacagtctgctcattggttt 341
           ||||| | ||||||||||| ||||||||||| |||||||
Sbjct: 290 ctaggtttagcatttcctggacagtctgctcgttggttt 252



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>emb|AM260494.1| Platanus acerifolia partial mRNA for 26S proteasome subunit 11
           (26S-11 gene)
          Length = 846

 Score =  137 bits (69), Expect = 3e-29
 Identities = 180/217 (82%)
 Strand = Plus / Minus

                                                                       
Query: 134 acaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattcgag 193
           ||||| ||||| | |||||| ||||  |||||||||||||| || |||||||| || |||
Sbjct: 687 acaactgtgtctaacatggtgcccaaagtctgaactatgtttgatgacatcaagttagag 628

                                                                       
Query: 194 acatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaatttc 253
           ||||| ||||| | ||||||||| ||||||||||  || || || || || || |  |||
Sbjct: 627 acatgttcttccaaatgcttcttagcatcttgcctgcccacgtttgcaattgccagcttc 568

                                                                       
Query: 254 tcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctcagc 313
           ||||| | |||||||||||| || || |||||||||||||| ||||||||||| ||||||
Sbjct: 567 tcaggtggcaactcatcctcttcctgaactgccttgttgtatttgatggctagactcagc 508

                                                
Query: 314 atttcctgaacagtctgctcattggtttctgaatgtg 350
           || ||||||||||| || ||||| ||||  |||||||
Sbjct: 507 atctcctgaacagtttgttcatttgttttggaatgtg 471



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>gb|AC140547.18| Medicago truncatula clone mth2-17p16, complete sequence
          Length = 123189

 Score =  123 bits (62), Expect = 4e-25
 Identities = 158/190 (83%)
 Strand = Plus / Minus

                                                                         
Query: 131   aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
             |||||||| || ||||||||  | || || || ||||| ||||| || ||||||||||| 
Sbjct: 49666 aagacaacagtatcaagcatcattccaagagtttgaacgatgttagaagacatcaaattt 49607

                                                                         
Query: 191   gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
             |||||||||||||| || |||||||| |||||||| | ||||||||| ||||| || | |
Sbjct: 49606 gagacatgctcttcgaggtgcttcttggcatcttgtcttccaacatttgctattgcaagt 49547

                                                                         
Query: 251   ttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctc 310
             |||||||| | || |||||| |||||||| || ||||||||||| ||| | |||| ||| 
Sbjct: 49546 ttctcaggtgtcagctcatcttcctcttgaacagccttgttgtatttggtagctaagctt 49487

                       
Query: 311   agcatttcct 320
             ||||||||||
Sbjct: 49486 agcatttcct 49477



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>gb|AC145022.28| Medicago truncatula clone mth2-8m24, complete sequence
          Length = 108548

 Score =  123 bits (62), Expect = 4e-25
 Identities = 158/190 (83%)
 Strand = Plus / Minus

                                                                        
Query: 131  aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
            |||||||| || ||||||||  | || || || ||||| ||||| || ||||||||||| 
Sbjct: 8449 aagacaacagtatcaagcatcattccaagagtttgaacgatgttagaagacatcaaattt 8390

                                                                        
Query: 191  gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
            |||||||||||||| || |||||||| |||||||| | ||||||||| ||||| || | |
Sbjct: 8389 gagacatgctcttcgaggtgcttcttggcatcttgtcttccaacatttgctattgcaagt 8330

                                                                        
Query: 251  ttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctc 310
            |||||||| | || |||||| |||||||| || ||||||||||| ||| | |||| ||| 
Sbjct: 8329 ttctcaggtgtcagctcatcttcctcttgaacagccttgttgtatttggtagctaagctt 8270

                      
Query: 311  agcatttcct 320
            ||||||||||
Sbjct: 8269 agcatttcct 8260



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>dbj|AP006080.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT48M22, TM0118c,
             complete sequence
          Length = 91116

 Score =  107 bits (54), Expect = 3e-20
 Identities = 156/190 (82%)
 Strand = Plus / Plus

                                                                         
Query: 131   aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
             |||||||| || ||||||||  | || || || ||||| ||||| || |||||||| || 
Sbjct: 67283 aagacaacagtatcaagcatcattccaagagtttgaacgatgttggaagacatcaagttt 67342

                                                                         
Query: 191   gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
             |||||||||||||| || |||||||| |||||||| | ||| ||||| ||||| || |  
Sbjct: 67343 gagacatgctcttcaaggtgcttcttggcatcttgtcttcccacatttgctattgcaagc 67402

                                                                         
Query: 251   ttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctc 310
             ||||||||||| | |||||| |||||||| || ||||||||||| ||||  ||||  |||
Sbjct: 67403 ttctcaggggaaagctcatcttcctcttggacagccttgttgtatttgacagctaaactc 67462

                       
Query: 311   agcatttcct 320
             ||||||||||
Sbjct: 67463 agcatttcct 67472



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                     
Query: 318   cctgaacagtctgctcattggtttctgaatgtgcgtcaaa 357
             ||||||||||||| ||||| ||||  ||||||| ||||||
Sbjct: 67638 cctgaacagtctgttcattagttttggaatgtgtgtcaaa 67677



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>gb|BT013130.1| Lycopersicon esculentum clone 114422R, mRNA sequence
          Length = 1181

 Score = 93.7 bits (47), Expect = 4e-16
 Identities = 170/211 (80%)
 Strand = Plus / Minus

                                                                        
Query: 131  aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
            |||| ||| ||||| |||||||| ||||  ||||| || ||||| || ||||||||||  
Sbjct: 1000 aagataacagtgtcgagcatggttcccaatgtctggacaatgtttgaagacatcaaatca 941

                                                                        
Query: 191  gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
            |||||||| ||||| ||||||||||| |||||||||| ||| ||||| || || ||||  
Sbjct: 940  gagacatgttcttcaagatgcttctttgcatcttgccttcctacatttgcaatagctagc 881

                                                                        
Query: 251  ttctcaggggacaactcatcctcctcttgcactgccttgttgtacttgatggctaggctc 310
            || || |||| |||||||||||| |  |||||||| || || ||||||   || ||  | 
Sbjct: 880  ttttctggggtcaactcatcctcttgctgcactgctttattatacttgccagcaagattt 821

                                           
Query: 311  agcatttcctgaacagtctgctcattggttt 341
            | ||| |||||||| ||||||||||||||||
Sbjct: 820  aacatctcctgaactgtctgctcattggttt 790



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>ref|NM_122261.2| Arabidopsis thaliana unknown protein AT5G23540 mRNA, complete cds
          Length = 1266

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
            |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 1026 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 967

                                                                        
Query: 191  gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
            |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 966  gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 907

                                                     
Query: 251  ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
            ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 906  ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 866



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>gb|AY230845.1| Arabidopsis thaliana 26S proteasome subunit RPN11 (RPN11) mRNA,
           RPN11-2 allele, complete cds
          Length = 1199

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 131 aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
           |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 989 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 930

                                                                       
Query: 191 gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
           |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 929 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 870

                                                    
Query: 251 ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
           ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 869 ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 829



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>gb|AY230844.1| Arabidopsis thaliana 26S proteasome subunit RPN11a (RPN11a) mRNA,
           RPN11a-1 allele, complete cds
          Length = 1163

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 131 aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
           |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 980 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 921

                                                                       
Query: 191 gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
           |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 920 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 861

                                                    
Query: 251 ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
           ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 860 ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 820



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>gb|AY230843.1| Arabidopsis thaliana 26S proteasome subunit RPN11A (RPN11a) mRNA,
            RPN11a-1 allele, complete cds
          Length = 1235

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
            |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 1013 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 954

                                                                        
Query: 191  gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
            |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 953  gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 894

                                                     
Query: 251  ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
            ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 893  ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 853



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>gb|AY091329.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory
           subunit (At5g23540) mRNA, complete cds
          Length = 958

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 131 aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
           |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 923 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 864

                                                                       
Query: 191 gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
           |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 863 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 804

                                                    
Query: 251 ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
           ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 803 ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 763



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>gb|AY070073.1| Arabidopsis thaliana putative 26S proteasome, non-ATPase regulatory
           subunit (At5g23540) mRNA, complete cds
          Length = 1227

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 131 aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
           |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 969 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 910

                                                                       
Query: 191 gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
           |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 909 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 850

                                                    
Query: 251 ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
           ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 849 ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 809



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>emb|BX829732.1|CNS0A1XY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB31ZG05 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 348

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                       
Query: 131 aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
           |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 191 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 132

                                                                       
Query: 191 gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
           |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 131 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 72

                                                    
Query: 251 ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
           ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 71  ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 31



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>gb|AY086277.1| Arabidopsis thaliana clone 23276 mRNA, complete sequence
          Length = 1185

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                        
Query: 131  aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
            |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 1029 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 970

                                                                        
Query: 191  gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
            |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 969  gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 910

                                                     
Query: 251  ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
            ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 909  ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 869



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>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1
          Length = 81365

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 131/161 (81%)
 Strand = Plus / Minus

                                                                         
Query: 131   aagacaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacatcaaattc 190
             |||||||| ||||| ||||| || || || |||||||| ||||| || ||||| |  |||
Sbjct: 18386 aagacaacagtgtcgagcatagtgcctagtgtctgaacaatgttggatgacatgaggttc 18327

                                                                         
Query: 191   gagacatgctcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaat 250
             |||||||| ||||| ||||||||||| |||||||| | ||| |||||  | || || |  
Sbjct: 18326 gagacatgttcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagc 18267

                                                      
Query: 251   ttctcaggggacaactcatcctcctcttgcactgccttgtt 291
             ||||| || |||||||| ||||||||||| || ||||||||
Sbjct: 18266 ttctctggtgacaactcgtcctcctcttgaaccgccttgtt 18226



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>gb|AC000098.1|YUP8H12 Arabidopsis thaliana chromosome 1 YAC yUP8H12 complete sequence
          Length = 103576

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 134   acaaccgtgtcaagcatggtccccagggtctgaactatgttcgacgacat 183
             |||||||||||||||||||| || |  |||||||||||||| || |||||
Sbjct: 50675 acaaccgtgtcaagcatggtgcctaatgtctgaactatgtttgatgacat 50626



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>emb|BX830953.1|CNS09YRU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS41ZB02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 898

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 75/92 (81%)
 Strand = Plus / Minus

                                                                       
Query: 200 tcttctagatgcttcttcgcatcttgccgtccaacattagctatcgctaatttctcaggg 259
           ||||| ||||||||||| |||||||| | ||| |||||  | || || |  ||||| || 
Sbjct: 894 tcttccagatgcttctttgcatcttgtcttcccacattcacaattgccagcttctctggt 835

                                           
Query: 260 gacaactcatcctcctcttgcactgccttgtt 291
           |||||||| ||||||||||| || ||||||||
Sbjct: 834 gacaactcgtcctcctcttgaaccgccttgtt 803



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>gb|AC009525.3| Arabidopsis thaliana chromosome I BAC F22D16 genomic sequence, complete
             sequence
          Length = 100239

 Score = 46.1 bits (23), Expect = 0.079
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                    
Query: 134   acaaccgtgtcaagcatggtccccagggtctgaactatg 172
             |||||||||||||||||||| || |  ||||||||||||
Sbjct: 49763 acaaccgtgtcaagcatggtgcctaatgtctgaactatg 49725



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>ref|XM_948501.1| Theileria annulata strain Ankara hypothetical protein (TA09560)
            partial mRNA
          Length = 10182

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 65   catataacatgaatgataga 84
            ||||||||||||||||||||
Sbjct: 8846 catataacatgaatgataga 8865



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>gb|AY792583.1| Potamophila parviflora alcohol dehydrogenase II (Adh2) gene, exons 4
            through 7 and partial cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 273  cctcttgcactgccttgttgtact 296
            |||||||||||| |||||||||||
Sbjct: 1071 cctcttgcactggcttgttgtact 1048


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,782,200
Number of Sequences: 3902068
Number of extensions: 2782200
Number of successful extensions: 107501
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 107421
Number of HSP's gapped (non-prelim): 69
length of query: 367
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 345
effective length of database: 17,147,199,772
effective search space: 5915783921340
effective search space used: 5915783921340
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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