Clone Name | rbart50b02 |
---|---|
Clone Library Name | barley_pub |
>MY18B_HUMAN (Q8IUG5) Myosin-18B (Myosin XVIIIb)| Length = 2567 Score = 37.0 bits (84), Expect = 0.012 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -1 Query: 309 EPTGERVQVH*PEAQGPGDGVRAGAAEYIRDGEEP 205 EP G+ Q P+AQGPG+GVR G AE ++G EP Sbjct: 257 EPQGKDRQGTRPQAQGPGEGVRPGKAE--KEGAEP 289
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 35.4 bits (80), Expect = 0.036 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%) Frame = -1 Query: 318 GRGEPTGERVQVH*PEAQG--PGDGVRAGAAEYIRDGEEPPGERDAAGATTK*RRPRQ 151 G +P E V+V E +G PG+ V AAE EP G DAAG RP++ Sbjct: 264 GSPQPRSEAVEVAAAENEGHSPGESVEDAAAEEAAGTREPEGSEDAAGEDGDQGRPQE 321
>METK_STRA5 (Q8E0A3) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 398 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +3 Query: 75 STAHPYEKYLIT*QLSGLHDELLMHVVSDVVTWW*HRQHPFLLEALHRLVYTLQH----- 239 S AH K L + SG L S V + P ++A+ V + QH Sbjct: 151 SLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEYDENDQPIRVDAV---VISTQHDPNVT 207 Query: 240 RHELHPQVLEPLVSELVPFH 299 +LH V+E +++E++P H Sbjct: 208 NDQLHKDVIEKVINEVIPSH 227
>METK_STRA3 (Q8E5Y0) S-adenosylmethionine synthetase (EC 2.5.1.6) (Methionine| adenosyltransferase) (AdoMet synthetase) (MAT) Length = 398 Score = 27.7 bits (60), Expect = 7.5 Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 5/80 (6%) Frame = +3 Query: 75 STAHPYEKYLIT*QLSGLHDELLMHVVSDVVTWW*HRQHPFLLEALHRLVYTLQH----- 239 S AH K L + SG L S V + P ++A+ V + QH Sbjct: 151 SLAHQLVKKLTDLRKSGELTYLRPDAKSQVTVEYDENNQPIRVDAV---VISTQHDPNVT 207 Query: 240 RHELHPQVLEPLVSELVPFH 299 +LH V+E +++E++P H Sbjct: 208 NDQLHKDVIEKVINEVIPSH 227
>QUEF_ERWCT (Q6D8F4) 7-cyano-7-deazaguanine reductase (EC 1.7.1.-)| Length = 282 Score = 27.7 bits (60), Expect = 7.5 Identities = 10/33 (30%), Positives = 22/33 (66%) Frame = +3 Query: 204 EALHRLVYTLQHRHELHPQVLEPLVSELVPFHR 302 EAL R + + +H +E H Q +E + ++L+ +++ Sbjct: 213 EALLRYIVSFRHHNEFHEQCVERIFNDLMHYYQ 245
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin matrix| protein 3) (DMP-3) [Contains: Dentin phosphoprotein (Dentin phosphophoryn) (DPP); Dentin sialoprotein (DSP)] Length = 934 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/46 (30%), Positives = 19/46 (41%) Frame = -1 Query: 312 GEPTGERVQVH*PEAQGPGDGVRAGAAEYIRDGEEPPGERDAAGAT 175 G P+G V+ G G+G AG DG + G + G T Sbjct: 239 GSPSGNGVEEDEDTGSGDGEGAEAGDGRESHDGTKGQGGQSHGGNT 284
>CADH1_CHICK (P08641) Epithelial-cadherin precursor (E-cadherin) (Cadherin-1)| (Liver cell adhesion molecule) (L-CAM) Length = 887 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/14 (64%), Positives = 13/14 (92%) Frame = -2 Query: 185 PVLPPSDDVRDNMH 144 P+LPP DD+RDN++ Sbjct: 744 PLLPPEDDMRDNVY 757
>BTBD4_HUMAN (Q86UZ6) BTB/POZ domain-containing protein 4 (Zinc finger protein| 340) Length = 589 Score = 27.3 bits (59), Expect = 9.8 Identities = 14/32 (43%), Positives = 17/32 (53%) Frame = -1 Query: 276 PEAQGPGDGVRAGAAEYIRDGEEPPGERDAAG 181 PEA PGDG Y+ D E+P GE + G Sbjct: 524 PEALFPGDG------PYLEDPEDPRGEAEELG 549 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,477,641 Number of Sequences: 219361 Number of extensions: 845675 Number of successful extensions: 2642 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2544 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2634 length of database: 80,573,946 effective HSP length: 84 effective length of database: 62,147,622 effective search space used: 1491542928 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)