ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart50b02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA re... 377 e-101
2gb|AY008295.1| Triticum aestivum cinnamoyl-CoA reductase mRNA, p... 220 2e-54
3gb|AY227672.1| Zea mays genotype Mo17 cinnamoyl-CoA reductase (c... 147 3e-32
4gb|AY227671.1| Zea mays genotype F288 cinnamoyl-CoA reductase (c... 147 3e-32
5gb|AY227670.1| Zea mays genotype MBS847 cinnamoyl-CoA reductase ... 147 3e-32
6gb|AY227669.1| Zea mays genotype F271 cinnamoyl-CoA reductase (c... 147 3e-32
7emb|Y15069.1|ZMCCR2 Zea mays mRNA for cinnamoyl-CoA reductase 147 3e-32
8gb|AY227044.1|AY227034S2 Zea mays genotype F4 cinnamoyl-CoA redu... 139 6e-30
9gb|AY227045.1|AY227033S2 Zea mays genotype F2 cinnamoyl-CoA redu... 139 6e-30
10gb|AY227043.1|AY227032S2 Zea mays genotype W117 cinnamoyl-CoA re... 139 6e-30
11gb|AY227042.1|AY227031S2 Zea mays genotype F7012 cinnamoyl-CoA r... 139 6e-30
12gb|AY227041.1| Zea mays genotype F113 cinnamoyl-CoA reductase (c... 139 6e-30
13gb|AY227668.1| Zea mays genotype F7025 cinnamoyl-CoA reductase (... 123 4e-25
14gb|AY227029.1| Zea mays genotype B73 cinnamoyl-CoA reductase (cc... 123 4e-25
15gb|AY227040.1|AY227030S2 Zea mays genotype Lan496 cinnamoyl-CoA ... 115 9e-23
16gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gen... 58 2e-05
17gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRN... 58 2e-05
18dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
19gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA re... 58 2e-05
20dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
21dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic D... 58 2e-05
22dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR mRNA ... 58 2e-05
23dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
24dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clon... 58 2e-05
25ref|XM_482628.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.004
26ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.004
27ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.004
28dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
29dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.004
30dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
31dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
32dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.004
33gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA reductase... 48 0.018
34ref|XM_468343.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
35ref|XM_468346.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.28
36gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence 44 0.28
37gb|AF278698.1| Lolium perenne cinnamoyl CoA reductase (CCR) mRNA... 44 0.28
38gb|AC098864.3| Homo sapiens BAC clone RP11-359L10 from 4, comple... 44 0.28
39dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
40dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.28
41emb|AJ428493.1|OSA428493 Oryza sativa ccr gene for cinnamoyl CoA... 44 0.28
42gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, c... 42 1.1
43gb|DQ207681.1| Zea mays cultivar inbred line Mo17 IDP241 marker 42 1.1
44gb|DQ207680.1| Zea mays cultivar B73 IDP241 marker 42 1.1
45ref|XM_370016.1| Magnaporthe grisea 70-15 hypothetical protein (... 42 1.1
46gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.1
47emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 42 1.1
48dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.1
49emb|X98083.1|ZMCINNRED Z.mays mRNA for cinnamoyl-CoA reductase 42 1.1
50emb|Y13734.1|ZMCCRGENE Zea mays mRNA for cinnamoyl CoA reductase 42 1.1
51gb|AY103989.1| Zea mays PCO114642 mRNA sequence 42 1.1
52gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Ca... 40 4.3
53gb|AC122014.3| Mus musculus chromosome 1 clone RP24-358F15, comp... 40 4.3
54gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5... 40 4.3
55gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's ... 40 4.3
56gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21... 40 4.3
57ref|XM_815035.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 4.3
58emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chr... 40 4.3
59emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chrom... 40 4.3
60emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, ... 40 4.3
61gb|AC183495.1| Brassica oleracea Contig A, complete sequence 40 4.3
62gb|AC023424.7| Homo sapiens BAC clone RP11-555K12 from 4, comple... 40 4.3
63gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, com... 40 4.3
64gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, com... 40 4.3
65emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in ... 40 4.3
66gb|AC139995.7| Mus musculus chromosome 1, clone RP23-427L3, comp... 40 4.3
67dbj|AK084768.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 4.3
68gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4... 40 4.3
69gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, ... 40 4.3
70gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, r... 40 4.3
71gb|AC012069.10| Homo sapiens BAC clone RP11-300D24 from 2, compl... 40 4.3
72gb|AC013404.3| Homo sapiens BAC clone RP11-293L17 from 2, comple... 40 4.3
73dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic D... 40 4.3
74gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68... 40 4.3
75gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete... 40 4.3
76dbj|AP003119.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.3
77dbj|AP003101.2| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 4.3
78emb|AL732461.23| Mouse DNA sequence from clone RP23-95K12 on chr... 40 4.3
79gb|AF037218.1| Human herpesvirus 7 strain RK, complete genome 40 4.3
80gb|AC134854.3| Mus musculus BAC clone RP24-286P14 from 8, comple... 40 4.3
81gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, comple... 40 4.3
82gb|AC171183.6| Mus musculus BAC RP24-545B2 (Roswell Park Cancer... 40 4.3 
>gb|AY771357.1| Triticum aestivum cultivar H4564 cinnamoyl-CoA reductase mRNA,
            complete cds
          Length = 1489

 Score =  377 bits (190), Expect = e-101
 Identities = 217/226 (96%)
 Strand = Plus / Minus

                                                                        
Query: 102  ttaattacgtagcaactgagcgggcttcatgatgagctgctcatgcatgttgtctcggac 161
            |||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 1231 ttaattacgtagcaactgggcgggcttcatcatgagctgctcatgcaggttgtctcggac 1172

                                                                        
Query: 162  gtcgtcacttggtggtagcaccggcagcatccctttctcctggaggctcttcaccgtctc 221
            |||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1171 gtcgtcgcctggcggtagcaccggcagcatccctttctcctggaggctcttcaccgtctc 1112

                                                                        
Query: 222  gtatatactctgcagcaccggcacgaactccatccccaggtccttgagcctctggttagt 281
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1111 gtatatgctctgcagcaccggcacgaactccatccccaggtccttgagcctctggttcgt 1052

                                                          
Query: 282  gaacttgtaccctttcaccggtgggttcacctcgtccttgcacttg 327
            ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1051 gaatttgtaccctttcaccggtgggttcacctcgtccttgcacttg 1006



 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 66/78 (84%), Gaps = 4/78 (5%)
 Strand = Plus / Minus

                                                                        
Query: 10   aaaagtgcatacgtgtacatatatatatgac----cgaatggacaaacatgtcccattca 65
            |||||||||||||||||   |||||||||||    ||||||||||  ||||||||||  |
Sbjct: 1336 aaaagtgcatacgtgtaggcatatatatgaccgatcgaatggacaggcatgtcccataga 1277

                              
Query: 66   attaactagtcgacagca 83
            ||||||||| ||||||||
Sbjct: 1276 attaactagccgacagca 1259
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>gb|AY008295.1| Triticum aestivum cinnamoyl-CoA reductase mRNA, partial cds
          Length = 498

 Score =  220 bits (111), Expect = 2e-54
 Identities = 120/123 (97%)
 Strand = Plus / Minus

                                                                       
Query: 205 aggctcttcaccgtctcgtatatactctgcagcaccggcacgaactccatccccaggtcc 264
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 479 aggctcttcaccgtctcgtatatgctctgcagcaccggcacgaactccatccccaggtcc 420

                                                                       
Query: 265 ttgagcctctggttagtgaacttgtaccctttcaccggtgggttcacctcgtccttgcac 324
           |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttgagcctctggttcgtgaatttgtaccctttcaccggtgggttcacctcgtccttgcac 360

              
Query: 325 ttg 327
           |||
Sbjct: 359 ttg 357
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>gb|AY227672.1| Zea mays genotype Mo17 cinnamoyl-CoA reductase (ccr2) gene, promoter
            region, exons 1 through 5, and complete cds
          Length = 2937

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 2897 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 2838

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 2837 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctacc 2778

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2777 accggagggttaacctggtccttgcacttg 2748
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>gb|AY227671.1| Zea mays genotype F288 cinnamoyl-CoA reductase (ccr2) gene, promoter
            region, exons 1 through 5, and complete cds
          Length = 2942

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 2902 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 2843

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 2842 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctacc 2783

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2782 accggagggttaacctggtccttgcacttg 2753
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>gb|AY227670.1| Zea mays genotype MBS847 cinnamoyl-CoA reductase (ccr2) gene,
            promoter region, exons 1 through 5, and complete cds
          Length = 2937

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 2897 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 2838

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 2837 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctacc 2778

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2777 accggagggttaacctggtccttgcacttg 2748
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>gb|AY227669.1| Zea mays genotype F271 cinnamoyl-CoA reductase (ccr2) gene, promoter
            region, exons 1 through 5, and complete cds
          Length = 2937

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 2897 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 2838

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 2837 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctacc 2778

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2777 accggagggttaacctggtccttgcacttg 2748
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>emb|Y15069.1|ZMCCR2 Zea mays mRNA for cinnamoyl-CoA reductase
          Length = 1468

 Score =  147 bits (74), Expect = 3e-32
 Identities = 131/150 (87%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1117 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1058

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1057 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctacc 998

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 997  accggagggttaacctggtccttgcacttg 968
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>gb|AY227044.1|AY227034S2 Zea mays genotype F4 cinnamoyl-CoA reductase (ccr2) gene, exons 4 and
            5 and partial cds
          Length = 1251

 Score =  139 bits (70), Expect = 6e-30
 Identities = 130/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1207 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1148

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1147 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctagc 1088

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            || || ||||| |||| |||||||||||||
Sbjct: 1087 acgggagggttaacctggtccttgcacttg 1058
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>gb|AY227045.1|AY227033S2 Zea mays genotype F2 cinnamoyl-CoA reductase (ccr2) gene, exons 4 and
            5 and partial cds
          Length = 1251

 Score =  139 bits (70), Expect = 6e-30
 Identities = 130/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1207 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1148

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1147 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctagc 1088

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            || || ||||| |||| |||||||||||||
Sbjct: 1087 acgggagggttaacctggtccttgcacttg 1058
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>gb|AY227043.1|AY227032S2 Zea mays genotype W117 cinnamoyl-CoA reductase (ccr2) gene, exons 4
            and 5 and partial cds
          Length = 1251

 Score =  139 bits (70), Expect = 6e-30
 Identities = 130/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1207 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1148

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1147 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctagc 1088

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            || || ||||| |||| |||||||||||||
Sbjct: 1087 acgggagggttaacctggtccttgcacttg 1058
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>gb|AY227042.1|AY227031S2 Zea mays genotype F7012 cinnamoyl-CoA reductase (ccr2) gene, exons 4
            and 5 and partial cds
          Length = 1251

 Score =  139 bits (70), Expect = 6e-30
 Identities = 130/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1207 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1148

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1147 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctagc 1088

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            || || ||||| |||| |||||||||||||
Sbjct: 1087 acgggagggttaacctggtccttgcacttg 1058
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>gb|AY227041.1| Zea mays genotype F113 cinnamoyl-CoA reductase (ccr2) gene, exons 4
            and 5 and partial cds
          Length = 1251

 Score =  139 bits (70), Expect = 6e-30
 Identities = 130/150 (86%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | |||||| 
Sbjct: 1207 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactgcagg 1148

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| ||||||||||||||||| ||||||||||| |||  |
Sbjct: 1147 accggcacgaagtccatccccagatccttgagcctctggttggtgaacttgtatcctagc 1088

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            || || ||||| |||| |||||||||||||
Sbjct: 1087 acgggagggttaacctggtccttgcacttg 1058
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>gb|AY227668.1| Zea mays genotype F7025 cinnamoyl-CoA reductase (ccr2) gene, promoter
            region, exons 1 through 5, and complete cds
          Length = 2937

 Score =  123 bits (62), Expect = 4e-25
 Identities = 128/150 (85%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | ||| || 
Sbjct: 2893 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactggagg 2834

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| |||||||| | |||||| ||||||||||| |||  |
Sbjct: 2833 accggcacgaagtccatccccagatccttgaggcgctggttggtgaacttgtatcctacc 2774

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2773 accggagggttaacctggtccttgcacttg 2744
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>gb|AY227029.1| Zea mays genotype B73 cinnamoyl-CoA reductase (ccr2) gene, promoter
            region, exons 1 through 5, and complete cds
          Length = 2966

 Score =  123 bits (62), Expect = 4e-25
 Identities = 128/150 (85%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | ||| || 
Sbjct: 2922 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactggagg 2863

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| |||||||| | |||||| ||||||||||| |||  |
Sbjct: 2862 accggcacgaagtccatccccagatccttgaggcgctggttggtgaacttgtatcctacc 2803

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 2802 accggagggttaacctggtccttgcacttg 2773
to top
>gb|AY227040.1|AY227030S2 Zea mays genotype Lan496 cinnamoyl-CoA reductase (ccr2) gene, exons 4
            and 5 and partial cds
          Length = 1212

 Score =  115 bits (58), Expect = 9e-23
 Identities = 127/150 (84%)
 Strand = Plus / Minus

                                                                        
Query: 178  agcaccggcagcatccctttctcctggaggctcttcaccgtctcgtatatactctgcagc 237
            ||||| |||||||| |||||||||||||||||  | ||||||||||| |  | ||| || 
Sbjct: 1172 agcacgggcagcatgcctttctcctggaggctggtgaccgtctcgtagaggcactggagg 1113

                                                                        
Query: 238  accggcacgaactccatccccaggtccttgagcctctggttagtgaacttgtaccctttc 297
            ||||||||||| ||||||||||| |||||||| | ||||||  |||||||||| |||  |
Sbjct: 1112 accggcacgaagtccatccccagatccttgaggcgctggttgttgaacttgtatcctacc 1053

                                          
Query: 298  accggtgggttcacctcgtccttgcacttg 327
            ||||| ||||| |||| |||||||||||||
Sbjct: 1052 accggagggttaacctggtccttgcacttg 1023
to top
>gb|AY061889.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) gene, complete cds
          Length = 5799

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||||||||||||||||||||
Sbjct: 5595 ttctcctggaggctcttcaccgtctcgta 5567
to top
>gb|AY061888.1| Lolium perenne cinnamoyl-CoA reductase (CCR1) mRNA, complete cds
          Length = 1395

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||||||||||||||||||||
Sbjct: 1147 ttctcctggaggctcttcaccgtctcgta 1119
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                             
Query: 196      ttctcctggaggctcttcaccgtctcgta 224
                |||||||||||||||||||||||||||||
Sbjct: 15021825 ttctcctggaggctcttcaccgtctcgta 15021853
to top
>gb|AY149607.1| Hordeum vulgare cultivar Orthega cinnamoyl CoA reductase mRNA,
            complete cds
          Length = 1279

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||||||||||||||||||||
Sbjct: 1071 ttctcctggaggctcttcaccgtctcgta 1043
to top
>dbj|AP005426.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0668D04
          Length = 148848

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                          
Query: 196   ttctcctggaggctcttcaccgtctcgta 224
             |||||||||||||||||||||||||||||
Sbjct: 13468 ttctcctggaggctcttcaccgtctcgta 13496
to top
>dbj|AP005429.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0701F11
          Length = 154950

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Plus

                                          
Query: 196   ttctcctggaggctcttcaccgtctcgta 224
             |||||||||||||||||||||||||||||
Sbjct: 91271 ttctcctggaggctcttcaccgtctcgta 91299
to top
>dbj|AB122055.1| Oryza sativa (japonica cultivar-group) CCR mRNA for cinnamoyl
           coenzyme A reductase, partial cds
          Length = 1111

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                        
Query: 196 ttctcctggaggctcttcaccgtctcgta 224
           |||||||||||||||||||||||||||||
Sbjct: 860 ttctcctggaggctcttcaccgtctcgta 832
to top
>dbj|AK104860.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D11, full
            insert sequence
          Length = 1245

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||||||||||||||||||||
Sbjct: 1046 ttctcctggaggctcttcaccgtctcgta 1018
to top
>dbj|AK067949.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P15, full
            insert sequence
          Length = 1265

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 29/29 (100%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||||||||||||||||||||
Sbjct: 1047 ttctcctggaggctcttcaccgtctcgta 1019
to top
>ref|XM_482628.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1423

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1173 ttctcctggaggcacttcaccgtctcgta 1145
to top
>ref|XM_507587.1| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA
          Length = 1439

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1174 ttctcctggaggcacttcaccgtctcgta 1146
to top
>ref|XM_507244.2| PREDICTED Oryza sativa (japonica cultivar-group), P0528B09.35-1 mRNA
          Length = 1441

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1174 ttctcctggaggcacttcaccgtctcgta 1146
to top
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                             
Query: 196      ttctcctggaggctcttcaccgtctcgta 224
                ||||||||||||| |||||||||||||||
Sbjct: 21499499 ttctcctggaggcacttcaccgtctcgta 21499527



 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 89       atatgaaaaatatttaatta 108
                ||||||||||||||||||||
Sbjct: 10281917 atatgaaaaatatttaatta 10281898
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>dbj|AP004703.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0528B09
          Length = 156897

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 196    ttctcctggaggctcttcaccgtctcgta 224
              ||||||||||||| |||||||||||||||
Sbjct: 103494 ttctcctggaggcacttcaccgtctcgta 103522
to top
>dbj|AK105870.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-204-A12, full
            insert sequence
          Length = 1439

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1174 ttctcctggaggcacttcaccgtctcgta 1146
to top
>dbj|AK105802.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-A12, full
            insert sequence
          Length = 1423

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1173 ttctcctggaggcacttcaccgtctcgta 1145
to top
>dbj|AK072872.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143B20, full
            insert sequence
          Length = 1441

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            ||||||||||||| |||||||||||||||
Sbjct: 1174 ttctcctggaggcacttcaccgtctcgta 1146
to top
>gb|AF307997.1|AF307997 Triticum aestivum cinnamoyl-CoA reductase I mRNA, partial cds
          Length = 696

 Score = 48.1 bits (24), Expect = 0.018
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 193 cctttctcctggaggctcttcaccgtctcgta 224
           ||||| || |||||||||||||||||||||||
Sbjct: 689 cctttttcttggaggctcttcaccgtctcgta 658
to top
>ref|XM_468343.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1014

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                         
Query: 262 tccttgagcctctggttagtgaacttgtac 291
           ||||||||||||||||| | ||||||||||
Sbjct: 899 tccttgagcctctggttcgagaacttgtac 870
to top
>ref|XM_468346.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1065

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 55/66 (83%)
 Strand = Plus / Minus

                                                                       
Query: 262 tccttgagcctctggttagtgaacttgtaccctttcaccggtgggttcacctcgtccttg 321
           ||||||||||||||||| | ||||||||||  || ||||   || ||| | |||||||||
Sbjct: 926 tccttgagcctctggttcgagaacttgtacggttccaccatcggattcccatcgtccttg 867

                 
Query: 322 cacttg 327
           ||||||
Sbjct: 866 cacttg 861
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>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence
          Length = 141360

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    gcatacgtgtacatatatatat 37
             ||||||||||||||||||||||
Sbjct: 48265 gcatacgtgtacatatatatat 48286
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>gb|AF278698.1| Lolium perenne cinnamoyl CoA reductase (CCR) mRNA, complete cds
          Length = 1207

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 196 ttctcctggaggctcttcaccgtctc 221
           |||||||||||||||||||| |||||
Sbjct: 974 ttctcctggaggctcttcacggtctc 949
to top
>gb|AC098864.3| Homo sapiens BAC clone RP11-359L10 from 4, complete sequence
          Length = 216280

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 18     atacgtgtacatatatatatga 39
              ||||||||||||||||||||||
Sbjct: 171521 atacgtgtacatatatatatga 171542
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 262      tccttgagcctctggttagtgaacttgtac 291
                ||||||||||||||||| | ||||||||||
Sbjct: 34777492 tccttgagcctctggttcgagaacttgtac 34777463



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 262      tccttgagcctctggttagtgaacttgtac 291
                ||||||||||||||||| | ||||||||||
Sbjct: 34762350 tccttgagcctctggttcgagaacttgtac 34762321
to top
>dbj|AP005303.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0016F11
          Length = 134907

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 262   tccttgagcctctggttagtgaacttgtac 291
             ||||||||||||||||| | ||||||||||
Sbjct: 95340 tccttgagcctctggttcgagaacttgtac 95311



 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 262   tccttgagcctctggttagtgaacttgtac 291
             ||||||||||||||||| | ||||||||||
Sbjct: 80198 tccttgagcctctggttcgagaacttgtac 80169
to top
>emb|AJ428493.1|OSA428493 Oryza sativa ccr gene for cinnamoyl CoA reductase, exons 1-5
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 262  tccttgagcctctggttagtgaacttgtac 291
            ||||||||||||||||| | ||||||||||
Sbjct: 2375 tccttgagcctctggttcgagaacttgtac 2346
to top
>gb|AC161521.16| Mus musculus chromosome 19, clone RP24-124P14, complete sequence
          Length = 169497

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 15    tgcatacgtgtacatatatatatga 39
             |||||| ||||||||||||||||||
Sbjct: 35644 tgcatatgtgtacatatatatatga 35620
to top
>gb|DQ207681.1| Zea mays cultivar inbred line Mo17 IDP241 marker
          Length = 303

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 196 ttctcctggaggctcttcaccgtctcgta 224
           |||||||||||| |||||||||| |||||
Sbjct: 212 ttctcctggaggttcttcaccgtgtcgta 240
to top
>gb|DQ207680.1| Zea mays cultivar B73 IDP241 marker
          Length = 278

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 196 ttctcctggaggctcttcaccgtctcgta 224
           |||||||||||| |||||||||| |||||
Sbjct: 186 ttctcctggaggttcttcaccgtgtcgta 214
to top
>ref|XM_370016.1| Magnaporthe grisea 70-15 hypothetical protein (MG06531.4) partial
           mRNA
          Length = 756

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 256 cccaggtccttgagcctctgg 276
           |||||||||||||||||||||
Sbjct: 467 cccaggtccttgagcctctgg 447
to top
>gb|AC121365.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0053E05,
              complete sequence
          Length = 196284

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 18     atacgtgtacatatatatatg 38
              |||||||||||||||||||||
Sbjct: 126544 atacgtgtacatatatatatg 126564
to top
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 2602197

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 18     atacgtgtacatatatatatg 38
              |||||||||||||||||||||
Sbjct: 889465 atacgtgtacatatatatatg 889445
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 18       atacgtgtacatatatatatg 38
                |||||||||||||||||||||
Sbjct: 26275496 atacgtgtacatatatatatg 26275516
to top
>emb|X98083.1|ZMCINNRED Z.mays mRNA for cinnamoyl-CoA reductase
          Length = 1398

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||| |||||||||| |||||
Sbjct: 1091 ttctcctggaggttcttcaccgtgtcgta 1063
to top
>emb|Y13734.1|ZMCCRGENE Zea mays mRNA for cinnamoyl CoA reductase
          Length = 1481

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||| |||||||||| |||||
Sbjct: 1193 ttctcctggaggttcttcaccgtgtcgta 1165
to top
>gb|AY103989.1| Zea mays PCO114642 mRNA sequence
          Length = 1521

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 196  ttctcctggaggctcttcaccgtctcgta 224
            |||||||||||| |||||||||| |||||
Sbjct: 1233 ttctcctggaggttcttcaccgtgtcgta 1205
to top
>gb|AC153889.19| Mus musculus 10 BAC RP23-434A12 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190042

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gtgcatacgtgtacatatatatat 37
              ||||||| ||||||||||||||||
Sbjct: 189303 gtgcatatgtgtacatatatatat 189326
to top
>gb|AC122014.3| Mus musculus chromosome 1 clone RP24-358F15, complete sequence
          Length = 168526

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tacgtgtacatatatatatg 38
              ||||||||||||||||||||
Sbjct: 152766 tacgtgtacatatatatatg 152785
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>gb|AE014833.1| Plasmodium falciparum 3D7 chromosome 10 section 5 of 7 of the complete
             sequence
          Length = 252394

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 82127 atacgtgtacatatatatat 82108
to top
>gb|AC096082.6| Rattus norvegicus 13 BAC CH230-11O17 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 209228

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 86     tccatatgaaaaatatttaa 105
              ||||||||||||||||||||
Sbjct: 115382 tccatatgaaaaatatttaa 115401
to top
>gb|AC091453.2| Mus musculus chromosome X clones RP21-19N11, RP21-667A15, RP21-395M8
              complete sequence
          Length = 350000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     gtgcatacgtgtacatatatatat 37
              ||||||| ||||||||||||||||
Sbjct: 117671 gtgcatatgtgtacatatatatat 117648
to top
>ref|XM_815035.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053510155.115) partial mRNA
          Length = 1203

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 178 agcaccggcagcatcccttt 197
           ||||||||||||||||||||
Sbjct: 691 agcaccggcagcatcccttt 710
to top
>emb|AL139093.11| Human DNA sequence from clone RP11-440J4 on chromosome 6 Contains a
             serine palmitoyltransferase long chain base subunit 1
             (SPTLC1) pseudogene, complete sequence
          Length = 131995

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   gtctcgtatatactctgcag 236
             ||||||||||||||||||||
Sbjct: 50081 gtctcgtatatactctgcag 50062
to top
>emb|AL929354.1|PFA929354 Plasmodium falciparum strain 3D7, chromosome 5, segment 4/4
          Length = 340552

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 84547 atacgtgtacatatatatat 84528
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>emb|BX294188.11| Zebrafish DNA sequence from clone DKEY-255G14, complete sequence
          Length = 261943

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 89     atatgaaaaatatttaattacgta 112
              |||| |||||||||||||||||||
Sbjct: 110801 atattaaaaatatttaattacgta 110778
to top
>gb|AC183495.1| Brassica oleracea Contig A, complete sequence
          Length = 356505

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 35355 atacgtgtacatatatatat 35374
to top
>gb|AC023424.7| Homo sapiens BAC clone RP11-555K12 from 4, complete sequence
          Length = 200147

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     atacgtgtacatatatatat 37
              ||||||||||||||||||||
Sbjct: 107889 atacgtgtacatatatatat 107908
to top
>gb|AC091103.4| Homo sapiens chromosome 18, clone RP11-749G1, complete sequence
          Length = 204340

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ggcagcatccctttctcctg 203
             ||||||||||||||||||||
Sbjct: 86329 ggcagcatccctttctcctg 86348
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>gb|AC091111.5| Homo sapiens chromosome 18, clone RP11-837M2, complete sequence
          Length = 174645

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 184   ggcagcatccctttctcctg 203
             ||||||||||||||||||||
Sbjct: 86329 ggcagcatccctttctcctg 86348
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>emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in linkage group 7,
             complete sequence
          Length = 181415

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    gtgcatacgtgtacatatatatat 37
             |||||| |||||||||||||||||
Sbjct: 50644 gtgcatgcgtgtacatatatatat 50621
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>gb|AC139995.7| Mus musculus chromosome 1, clone RP23-427L3, complete sequence
          Length = 165802

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tacgtgtacatatatatatg 38
             ||||||||||||||||||||
Sbjct: 26568 tacgtgtacatatatatatg 26587
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>dbj|AK084768.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
            library, clone:D330040N20 product:unclassifiable, full
            insert sequence
          Length = 2942

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   atacgtgtacatatatatat 37
            ||||||||||||||||||||
Sbjct: 2767 atacgtgtacatatatatat 2786
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>gb|AC019216.9|AC019216 Homo sapiens BAC clone RP11-484N11 from 4, complete sequence
          Length = 160858

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 11881 atacgtgtacatatatatat 11862
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>gb|AC006590.11|AC006590 Drosophila melanogaster, chromosome 2L, region 36E-, BAC clone
            BACR13N02, complete sequence
          Length = 172479

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   atacgtgtacatatatatat 37
            ||||||||||||||||||||
Sbjct: 5820 atacgtgtacatatatatat 5839
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>gb|AC008184.4|AC008184 Drosophila melanogaster, chromosome 2L, region 36E5-36F2, BAC clone
             BACR04D05, complete sequence
          Length = 154730

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 83341 atacgtgtacatatatatat 83360
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>gb|AC012069.10| Homo sapiens BAC clone RP11-300D24 from 2, complete sequence
          Length = 149337

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 18  atacgtgtacatatatatat 37
           ||||||||||||||||||||
Sbjct: 730 atacgtgtacatatatatat 749
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>gb|AC013404.3| Homo sapiens BAC clone RP11-293L17 from 2, complete sequence
          Length = 52086

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 50816 atacgtgtacatatatatat 50835
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>dbj|AP004650.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1540_G08
          Length = 126263

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    atatgaaaaatatttaatta 108
             ||||||||||||||||||||
Sbjct: 87940 atatgaaaaatatttaatta 87921
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>gb|AE003659.2| Drosophila melanogaster chromosome 2L, section 68 of 83 of the complete
             sequence
          Length = 260027

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 22732 atacgtgtacatatatatat 22751
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>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence
          Length = 179691

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 89     atatgaaaaatatttaatta 108
              ||||||||||||||||||||
Sbjct: 128615 atatgaaaaatatttaatta 128634
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>dbj|AP003119.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-21L23, complete
             sequences
          Length = 136000

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tctcctggaggctcttcacc 216
             ||||||||||||||||||||
Sbjct: 22382 tctcctggaggctcttcacc 22401
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>dbj|AP003101.2| Homo sapiens genomic DNA, chromosome 11q clone:RP11-30J7, complete
             sequences
          Length = 157959

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 197   tctcctggaggctcttcacc 216
             ||||||||||||||||||||
Sbjct: 78666 tctcctggaggctcttcacc 78685
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>emb|AL732461.23| Mouse DNA sequence from clone RP23-95K12 on chromosome X, complete
              sequence
          Length = 245751

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 14     gtgcatacgtgtacatatatatat 37
              ||||||| ||||||||||||||||
Sbjct: 229090 gtgcatatgtgtacatatatatat 229067
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>gb|AF037218.1| Human herpesvirus 7 strain RK, complete genome
          Length = 153080

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 48     acaaacatgtcccattcaat 67
              ||||||||||||||||||||
Sbjct: 140271 acaaacatgtcccattcaat 140252
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>gb|AC134854.3| Mus musculus BAC clone RP24-286P14 from 8, complete sequence
          Length = 152471

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atacgtgtacatatatatat 37
             ||||||||||||||||||||
Sbjct: 32050 atacgtgtacatatatatat 32069
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>gb|AC130533.2| Mus musculus BAC clone RP23-211B19 from 8, complete sequence
          Length = 203431

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     atacgtgtacatatatatat 37
              ||||||||||||||||||||
Sbjct: 183437 atacgtgtacatatatatat 183456
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>gb|AC171183.6| Mus musculus  BAC RP24-545B2 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 211697

 Score = 40.1 bits (20), Expect = 4.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 14     gtgcatacgtgtacatatatatat 37
              ||||||| ||||||||||||||||
Sbjct: 142255 gtgcatatgtgtacatatatatat 142278


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,860,706
Number of Sequences: 3902068
Number of extensions: 3860706
Number of successful extensions: 94281
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 93904
Number of HSP's gapped (non-prelim): 377
length of query: 327
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 305
effective length of database: 17,147,199,772
effective search space: 5229895930460
effective search space used: 5229895930460
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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