ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart50b01 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 206 bits (104), Expect = 4e-50 Identities = 164/184 (89%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| ||||||||||||||||| ||| |||||||||| |||||||| || ||||| ||| Sbjct: 6191263 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 6191322 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 6191323 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 6191382 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 364 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 6191383 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 6191442 Query: 365 agcg 368 |||| Sbjct: 6191443 agcg 6191446 Score = 42.1 bits (21), Expect = 1.3 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 226 cgccggcagcaggtacttcctcccgtgcgcgcc-gtgggcgttgtagctcgctccggtgg 284 |||||||||||||||||||| ||| ||| ||| | |||||||||||| || |||||| Sbjct: 6189005 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 6189063 Query: 285 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 344 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 6189064 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 6189123 Query: 345 ggcacgccgtcgcggcctcca 365 ||||||||| |||||||||| Sbjct: 6189124 cgcacgccgtggcggcctcca 6189144 Score = 40.1 bits (20), Expect = 5.0 Identities = 71/88 (80%) Strand = Plus / Minus Query: 236 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 295 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 6211233 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 6211174 Query: 296 agcagctggccggcgtacccggggtacg 323 |||| || ||||||||||||||||||| Sbjct: 6211173 agcaccttcccggcgtacccggggtacg 6211146
>dbj|AP003488.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0436F11 Length = 165550 Score = 206 bits (104), Expect = 4e-50 Identities = 164/184 (89%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| ||||||||||||||||| ||| |||||||||| |||||||| || ||||| ||| Sbjct: 105082 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 105141 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 105142 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 105201 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 364 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 105202 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 105261 Query: 365 agcg 368 |||| Sbjct: 105262 agcg 105265 Score = 42.1 bits (21), Expect = 1.3 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Plus Query: 226 cgccggcagcaggtacttcctcccgtgcgcgcc-gtgggcgttgtagctcgctccggtgg 284 |||||||||||||||||||| ||| ||| ||| | |||||||||||| || |||||| Sbjct: 102824 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 102882 Query: 285 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 344 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 102883 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 102942 Query: 345 ggcacgccgtcgcggcctcca 365 ||||||||| |||||||||| Sbjct: 102943 cgcacgccgtggcggcctcca 102963 Score = 40.1 bits (20), Expect = 5.0 Identities = 71/88 (80%) Strand = Plus / Minus Query: 236 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 295 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 125052 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 124993 Query: 296 agcagctggccggcgtacccggggtacg 323 |||| || ||||||||||||||||||| Sbjct: 124992 agcaccttcccggcgtacccggggtacg 124965
>dbj|AK061401.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-G10, full insert sequence Length = 962 Score = 206 bits (104), Expect = 4e-50 Identities = 164/184 (89%) Strand = Plus / Minus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| ||||||||||||||||| ||| |||||||||| |||||||| || ||||| ||| Sbjct: 851 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 792 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 791 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 732 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 364 |||||||| || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 731 ccggcgtagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 672 Query: 365 agcg 368 |||| Sbjct: 671 agcg 668
>dbj|AK099621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013053E02, full insert sequence Length = 837 Score = 198 bits (100), Expect = 9e-48 Identities = 163/184 (88%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| ||||||||||||||||| ||| |||||||||| |||||||| || ||||| ||| Sbjct: 40 tacacgagcgtggagcaggcggacgtgtcggggtcgaagagcgccgggaggaggtatttc 99 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 | |||||||||||||| ||||||||||| || ||||||||| ||||||||||||| | Sbjct: 100 cggccgtgcgcgccgtgcgcgttgtagctggcgccggtggccttgtccaccagcagcgcg 159 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctcc 364 ||||| || || ||||||||||||||||||||||| |||| ||||||||||||||||||| Sbjct: 160 ccggcctagcccgggtacgcgcccttgccgtacacgcccgtgcacgccgtcgcggcctcc 219 Query: 365 agcg 368 |||| Sbjct: 220 agcg 223
>gb|AY105815.1| Zea mays PCO102946 mRNA sequence Length = 1238 Score = 129 bits (65), Expect = 7e-27 Identities = 128/149 (85%) Strand = Plus / Minus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 |||||||| | |||||||||||||||||| || |||| ||| ||| |||| || ||| || Sbjct: 996 agcgccgggaccaggtacttcctcccgtgggccccgttggcattgaagctggccccgctg 937 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| ||| ||||||||| ||| ||||| |||||||||||||||||||||||||| || Sbjct: 936 gcctggtctaccagcagcgagccagcgtagccggggtacgcgcccttgccgtacacgccg 877 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 | ||||||||| ||||||||||||||||| Sbjct: 876 gcgcacgccgtggcggcctccagcggcgc 848
>gb|AF325723.1|AF325723 Pennisetum ciliare phosphate-induced protein 1-like protein mRNA, complete cds Length = 1160 Score = 121 bits (61), Expect = 2e-24 Identities = 127/149 (85%) Strand = Plus / Minus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 |||||||| | ||||||||||||||| || || |||| ||| ||| |||| || ||| || Sbjct: 989 agcgccgggaccaggtacttcctcccatgggccccgttggcattgaagctggccccgctg 930 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| ||||||||||||| || ||||| |||||||||||||||||||||||||| || Sbjct: 929 gcctggtccaccagcagcgaccccgcgtagccggggtacgcgcccttgccgtacacgccg 870 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 | ||||||||| ||||||||||||||||| Sbjct: 869 gcgcacgccgtggcggcctccagcggcgc 841
>ref|XM_467879.1| Oryza sativa (japonica cultivar-group), mRNA Length = 936 Score = 117 bits (59), Expect = 3e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 194 gtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgc 253 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 926 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 867 Query: 254 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 313 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 866 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 807 Query: 314 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgc 372 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 806 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgc 748
>ref|XM_467877.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1222 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 209 gtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttg 268 ||||| || ||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 1036 gtggcaggatcgaacaaagccggaagcaggtatttcctcccgtgtgctccattggcgttg 977 Query: 269 tagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggtacgcgccc 328 ||||||||||| || || ||||||| ||| | ||||| || ||||||||||| || Sbjct: 976 tagctcgctcccgtcgcggggtccaccgccaggttcccggcataaccggggtacgcaccg 917 Query: 329 ttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 916 ctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctc 870
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 117 bits (59), Expect = 3e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 194 gtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgc 253 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 31870943 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 31870884 Query: 254 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 313 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 31870883 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 31870824 Query: 314 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgc 372 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 31870823 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgc 31870765 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 209 gtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttg 268 ||||| || ||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 31859226 gtggcaggatcgaacaaagccggaagcaggtatttcctcccgtgtgctccattggcgttg 31859285 Query: 269 tagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggtacgcgccc 328 ||||||||||| || || ||||||| ||| | ||||| || ||||||||||| || Sbjct: 31859286 tagctcgctcccgtcgcggggtccaccgccaggttcccggcataaccggggtacgcaccg 31859345 Query: 329 ttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 31859346 ctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctc 31859392 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 31842723 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 31842782 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 31842783 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 31842842 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 31842843 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 31842891 Score = 81.8 bits (41), Expect = 1e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 31853826 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 31853885 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 31853886 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 31853945 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 ||||||||||| ||||||||||||||||| Sbjct: 31853946 gggcacgccgtggcggcctccagcggcgc 31853974
>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0471A11 Length = 157740 Score = 117 bits (59), Expect = 3e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 194 gtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgc 253 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 31944 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 31885 Query: 254 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 313 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 31884 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 31825 Query: 314 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgc 372 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 31824 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgc 31766 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 209 gtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttg 268 ||||| || ||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 20227 gtggcaggatcgaacaaagccggaagcaggtatttcctcccgtgtgctccattggcgttg 20286 Query: 269 tagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggtacgcgccc 328 ||||||||||| || || ||||||| ||| | ||||| || ||||||||||| || Sbjct: 20287 tagctcgctcccgtcgcggggtccaccgccaggttcccggcataaccggggtacgcaccg 20346 Query: 329 ttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 20347 ctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctc 20393 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 3724 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 3783 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 3784 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 3843 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 3844 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 3892 Score = 81.8 bits (41), Expect = 1e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 14827 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 14886 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 14887 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 14946 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 ||||||||||| ||||||||||||||||| Sbjct: 14947 gggcacgccgtggcggcctccagcggcgc 14975
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Plus Query: 209 gtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttg 268 ||||| || ||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 155024 gtggcaggatcgaacaaagccggaagcaggtatttcctcccgtgtgctccattggcgttg 155083 Query: 269 tagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggtacgcgccc 328 ||||||||||| || || ||||||| ||| | ||||| || ||||||||||| || Sbjct: 155084 tagctcgctcccgtcgcggggtccaccgccaggttcccggcataaccggggtacgcaccg 155143 Query: 329 ttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 155144 ctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctc 155190 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Plus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 138521 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 138580 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 138581 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 138640 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 138641 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 138689 Score = 81.8 bits (41), Expect = 1e-12 Identities = 122/149 (81%) Strand = Plus / Plus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 149624 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 149683 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 149684 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 149743 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 ||||||||||| ||||||||||||||||| Sbjct: 149744 gggcacgccgtggcggcctccagcggcgc 149772
>dbj|AK070419.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023049J22, full insert sequence Length = 1187 Score = 117 bits (59), Expect = 3e-23 Identities = 149/179 (83%) Strand = Plus / Minus Query: 194 gtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgc 253 ||||||||||| || ||| ||||||| | |||||||| | |||||| |||||||||||| Sbjct: 991 gtggagcaggccgacgtgtcggggtctacgagcgccgggaccaggtatttcctcccgtgc 932 Query: 254 gcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtac 313 || || | ||||||||||| || ||| ||||| ||||||||||||| || ||||| Sbjct: 931 gccccattcgcgttgtagctggccccgctggccgggtccaccagcagcgacccagcgtaa 872 Query: 314 ccggggtacgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgc 372 || |||||||| |||||||||||||| || | |||||| || ||||||||||||||||| Sbjct: 871 cccgggtacgcccccttgccgtacactccggcgcacgcggtggcggcctccagcggcgc 813
>dbj|AK063605.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-118-C09, full insert sequence Length = 1222 Score = 117 bits (59), Expect = 3e-23 Identities = 140/167 (83%) Strand = Plus / Minus Query: 209 gtggcggggtcgaacagcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttg 268 ||||| || ||||||| ||||| |||||||| ||||||||||| || || | ||||||| Sbjct: 1036 gtggcaggatcgaacaaagccggaagcaggtatttcctcccgtgtgctccattggcgttg 977 Query: 269 tagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggtacgcgccc 328 ||||||||||| || || ||||||| ||| | ||||| || ||||||||||| || Sbjct: 976 tagctcgctcccgtcgcggggtccaccgccaggttcccggcataaccggggtacgcaccg 917 Query: 329 ttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||||| |||||||| ||||||||||||||||||||||||||||| Sbjct: 916 ctgccgtagacccccggacacgccgtcgcggcctccagcggcgcctc 870
>ref|XM_506983.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.37-2 mRNA Length = 1129 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 1033 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 974 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 973 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 914 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 913 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 865
>ref|XM_467873.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1127 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 1031 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 972 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 971 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 912 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 911 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 863
>dbj|AK063454.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-115-G05, full insert sequence Length = 1127 Score = 97.6 bits (49), Expect = 2e-17 Identities = 139/169 (82%) Strand = Plus / Minus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 1031 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 972 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccagcagctgg 304 |||| || |||||||| |||||||||||| |||||||||| |||| || || || | Sbjct: 971 ctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgaggagttta 912 Query: 305 ccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 911 ccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 863
>ref|XM_483034.1| Oryza sativa (japonica cultivar-group), mRNA Length = 924 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 262 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 321 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 637 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 578 Query: 322 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||| |||| ||| ||||| ||| |||||| | ||||||||||||||||| Sbjct: 577 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctc 524
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 262 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 321 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 23962452 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 23962511 Query: 322 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||| |||| ||| ||||| ||| |||||| | ||||||||||||||||| Sbjct: 23962512 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctc 23962565
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 262 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 321 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 95603 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 95662 Query: 322 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||| |||| ||| ||||| ||| |||||| | ||||||||||||||||| Sbjct: 95663 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctc 95716
>dbj|AK073011.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023145I01, full insert sequence Length = 922 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Minus Query: 262 ggcgttgtagctcgctccggtggccccgtccaccagcagctggccggcgtacccggggta 321 |||||||||||| || |||||||| |||||||| |||||||||||| |||||| ||||| Sbjct: 635 ggcgttgtagctggcgccggtggcggcgtccaccggcagctggccggggtaccccgggta 576 Query: 322 cgcgcccttgccgtacacccccgggcacgccgtcgcggcctccagcggcgcctc 375 ||||| |||| ||| ||||| ||| |||||| | ||||||||||||||||| Sbjct: 575 ggcgccggcgccgaacatccccgtgcaggccgtcaccgcctccagcggcgcctc 522
>ref|XM_467876.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1193 Score = 81.8 bits (41), Expect = 1e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 1021 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 962 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 961 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 902 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 ||||||||||| ||||||||||||||||| Sbjct: 901 gggcacgccgtggcggcctccagcggcgc 873
>dbj|AK062900.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-F03, full insert sequence Length = 1193 Score = 81.8 bits (41), Expect = 1e-12 Identities = 122/149 (81%) Strand = Plus / Minus Query: 224 agcgccggcagcaggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtg 283 ||||| || |||||||| |||||||||| |||||| | |||||| ||||| || ||||| Sbjct: 1021 agcgcgggaagcaggtatttcctcccgttcgcgccattggcgttatagcttgccccggtc 962 Query: 284 gccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacaccccc 343 ||| |||||| ||||| |||||| | || ||||||||||| | ||| | || ||| Sbjct: 961 gcctgatccaccttcagctcaccggcgaatccagggtacgcgccgctcccgaagactccc 902 Query: 344 gggcacgccgtcgcggcctccagcggcgc 372 ||||||||||| ||||||||||||||||| Sbjct: 901 gggcacgccgtggcggcctccagcggcgc 873
>ref|XM_467872.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1110 Score = 79.8 bits (40), Expect = 6e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 238 gtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccag 297 ||||||||||| || |||||||| |||||||||||| |||||||||| |||| || || Sbjct: 979 gtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgag 920 Query: 298 cagctggccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 || | ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 919 gagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 864
>dbj|AK119695.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-157-C06, full insert sequence Length = 1110 Score = 79.8 bits (40), Expect = 6e-12 Identities = 97/116 (83%) Strand = Plus / Minus Query: 238 gtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccaccag 297 ||||||||||| || |||||||| |||||||||||| |||||||||| |||| || || Sbjct: 979 gtacttcctcctgttcgcgccgttggcgttgtagctggctccggtggtggcgtcgacgag 920 Query: 298 cagctggccggcgtacccggggtacgcgcccttgccgtacacccccgggcacgccg 353 || | ||||||| ||| ||||||||||| ||||||| || ||||||||||||| Sbjct: 919 gagtttaccggcgttccccgggtacgcgccgctgccgtagactcccgggcacgccg 864
>dbj|AK101655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033057F02, full insert sequence Length = 1128 Score = 79.8 bits (40), Expect = 6e-12 Identities = 85/100 (85%) Strand = Plus / Minus Query: 185 tacaccagcgtggagcaggcggaggtggcggggtcgaacagcgccggcagcaggtacttc 244 ||||| |||||| ||||| ||| || ||||| | | ||| |||||| |||||||||||| Sbjct: 1032 tacacaagcgtgtcgcaggaggacgttgcgggattgtacaacgccgggagcaggtacttc 973 Query: 245 ctcccgtgcgcgccgtgggcgttgtagctcgctccggtgg 284 |||| || |||||||| |||||||||||| |||||||||| Sbjct: 972 ctcctgttcgcgccgttggcgttgtagctggctccggtgg 933
>ref|NM_196156.1| Oryza sativa (japonica cultivar-group) putative phosphate-induced protein (OSJNBa0095C06.7), mRNA Length = 1005 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 317 gggtacgcgcccttgccgtacacccccgggcacgc 351 ||||||||||| ||||||||||||||||||||| Sbjct: 872 gggtacgcgccgcggccgtacacccccgggcacgc 838
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone OSJNBa0095C06, from Chromosome 10, complete sequence Length = 156159 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 317 gggtacgcgcccttgccgtacacccccgggcacgc 351 ||||||||||| ||||||||||||||||||||| Sbjct: 58756 gggtacgcgccgcggccgtacacccccgggcacgc 58722
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 317 gggtacgcgcccttgccgtacacccccgggcacgc 351 ||||||||||| ||||||||||||||||||||| Sbjct: 11474763 gggtacgcgccgcggccgtacacccccgggcacgc 11474729
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 46.1 bits (23), Expect = 0.081 Identities = 32/35 (91%) Strand = Plus / Minus Query: 317 gggtacgcgcccttgccgtacacccccgggcacgc 351 ||||||||||| ||||||||||||||||||||| Sbjct: 11481203 gggtacgcgccgcggccgtacacccccgggcacgc 11481169
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 acaaaggctgatttacatttt 21 ||||||||||||||||||||| Sbjct: 1738417 acaaaggctgatttacatttt 1738437
>gb|AY230855.1| Xanthomonas sp. 35Y 70 kDa protein gene, complete cds Length = 2037 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 217 gtcgaacagcgccggcagcag 237 ||||||||||||||||||||| Sbjct: 837 gtcgaacagcgccggcagcag 817
>dbj|AK058704.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-C08, full insert sequence Length = 1268 Score = 42.1 bits (21), Expect = 1.3 Identities = 113/141 (80%), Gaps = 2/141 (1%) Strand = Plus / Minus Query: 226 cgccggcagcaggtacttcctcccgtgcgcg-ccgtgggcgttgtagctcgctccggtgg 284 |||||||||||||||||||| ||| ||| | ||| |||||||||||| || |||||| Sbjct: 976 cgccggcagcaggtacttccggccg-gcgagcccgacggcgttgtagctggcgccggtga 918 Query: 285 ccccgtccaccagcagctggccggcgtacccggggtacgcgcccttgccgtacacccccg 344 || |||| ||||||| ||||| ||| |||||| | ||||| ||||| | || || | Sbjct: 917 ccgggtccttgagcagcttgccggggtagccggggaaggcgccgctgccgaagacgccgg 858 Query: 345 ggcacgccgtcgcggcctcca 365 ||||||||| |||||||||| Sbjct: 857 cgcacgccgtggcggcctcca 837
>ref|XM_469111.1| Oryza sativa (japonica cultivar-group), mRNA Length = 444 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 51 ggagcaggcggaggtggcgaggtggagcagcg 20
>ref|NM_189865.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1875 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcgg 215 |||||||||||||||||||| Sbjct: 178 ggagcaggcggaggtggcgg 159
>ref|XM_600477.2| PREDICTED: Bos taurus similar to Muscle-cadherin precursor (M-cadherin) (Cadherin-15) (Cadherin-14) (LOC522202), mRNA Length = 3264 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 278 ccggtggccccgtccaccagcagc 301 |||||||||||||||||| ||||| Sbjct: 1805 ccggtggccccgtccacctgcagc 1782
>gb|AY659306.1| Synthetic construct Peudomonas aeruginosa clone FLH038416.01F PA3773 gene, partial cds Length = 1158 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tcgaacagcgccggcagcag 237 |||||||||||||||||||| Sbjct: 494 tcgaacagcgccggcagcag 475
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 25514096 ggagcaggcggaggtggcgaggtggagcagcg 25514065
>ref|XM_542202.2| PREDICTED: Canis familiaris similar to adenomatosis polyposis coli 2 (LOC485084), mRNA Length = 7620 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 285 ccccgtccaccagcagctgg 304 |||||||||||||||||||| Sbjct: 460 ccccgtccaccagcagctgg 441
>emb|BX004881.17| Zebrafish DNA sequence from clone CH211-141M16 in linkage group 13, complete sequence Length = 189908 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 aatacagtttggctagatgg 125 |||||||||||||||||||| Sbjct: 93966 aatacagtttggctagatgg 93947
>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide synthesis gene cluster, partial sequence Length = 124311 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 ccagcgtggagcaggcggaggtgg 212 |||||||||||| ||||||||||| Sbjct: 36765 ccagcgtggagccggcggaggtgg 36788
>emb|AJ557546.1|MLI557546 Melittangium lichenicola melithiazol gene cluster Length = 51855 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcgg 215 |||||||||||||||||||| Sbjct: 25240 ggagcaggcggaggtggcgg 25221
>emb|BX511227.7| Zebrafish DNA sequence from clone DKEY-100E19 in linkage group 14, complete sequence Length = 262038 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 ctgatttacattttttattt 27 |||||||||||||||||||| Sbjct: 5871 ctgatttacattttttattt 5852
>gb|AC103876.2| Homo sapiens chromosome 15, clone CTD-2282O12, complete sequence Length = 113199 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 tgatttacattttttattta 28 |||||||||||||||||||| Sbjct: 45849 tgatttacattttttattta 45868
>ref|XM_694557.1| PREDICTED: Danio rerio similar to neurochondrin isoform 1 (LOC571005), partial mRNA Length = 1395 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 222 acagcgccggcagcaggtac 241 |||||||||||||||||||| Sbjct: 814 acagcgccggcagcaggtac 795
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcgg 215 |||||||||||||||||||| Sbjct: 25618798 ggagcaggcggaggtggcgg 25618779
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 25605405 ggagcaggcggaggtggcgaggtggagcagcg 25605374
>gb|AE004796.1| Pseudomonas aeruginosa PAO1, section 357 of 529 of the complete genome Length = 12098 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 tcgaacagcgccggcagcag 237 |||||||||||||||||||| Sbjct: 6016 tcgaacagcgccggcagcag 5997
>gb|AC135600.3| Oryza sativa chromosome 3 BAC OSJNBb0047K21 genomic sequence, complete sequence Length = 117046 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 20756 ggagcaggcggaggtggcgaggtggagcagcg 20787
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 219 cgaacagcgccggcagcagg 238 |||||||||||||||||||| Sbjct: 4550911 cgaacagcgccggcagcagg 4550892
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcgg 215 |||||||||||||||||||| Sbjct: 72771 ggagcaggcggaggtggcgg 72752
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 89 tactactagttgtacccaat 108 |||||||||||||||||||| Sbjct: 150700 tactactagttgtacccaat 150681
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 202 ggcggaggtggcggggtcgaacag 225 ||||| |||||||||||||||||| Sbjct: 5337221 ggcggcggtggcggggtcgaacag 5337244
>dbj|AP004727.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0516A04 Length = 145107 Score = 40.1 bits (20), Expect = 5.0 Identities = 71/88 (80%) Strand = Plus / Minus Query: 236 aggtacttcctcccgtgcgcgccgtgggcgttgtagctcgctccggtggccccgtccacc 295 |||||||||| || || |||||| |||||||||||| | ||||| | | |||| || Sbjct: 5309 aggtacttccggccatgggcgccgacggcgttgtagctgccaccggtcgtctcgtcgacg 5250 Query: 296 agcagctggccggcgtacccggggtacg 323 |||| || ||||||||||||||||||| Sbjct: 5249 agcaccttcccggcgtacccggggtacg 5222
>emb|BX005175.8| Zebrafish DNA sequence from clone DKEY-14H17 in linkage group 11, complete sequence Length = 234851 Score = 40.1 bits (20), Expect = 5.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 gatttacattttttatttag 29 |||||||||||||||||||| Sbjct: 21220 gatttacattttttatttag 21201
>dbj|AK105700.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-D06, full insert sequence Length = 796 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 142 ggagcaggcggaggtggcgaggtggagcagcg 111
>gb|BT024052.1| Zea mays clone EL01N0437G11 mRNA sequence Length = 1768 Score = 40.1 bits (20), Expect = 5.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 304 gccggcgtacccggggtacgcgcc 327 |||||||||| ||||||||||||| Sbjct: 1229 gccggcgtacgcggggtacgcgcc 1252
>dbj|AK062598.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-102-F10, full insert sequence Length = 722 Score = 40.1 bits (20), Expect = 5.0 Identities = 29/32 (90%) Strand = Plus / Minus Query: 196 ggagcaggcggaggtggcggggtcgaacagcg 227 ||||||||||||||||||| ||| || ||||| Sbjct: 68 ggagcaggcggaggtggcgaggtggagcagcg 37 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,919,130 Number of Sequences: 3902068 Number of extensions: 2919130 Number of successful extensions: 63961 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 56 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 63389 Number of HSP's gapped (non-prelim): 565 length of query: 375 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 353 effective length of database: 17,147,199,772 effective search space: 6052961519516 effective search space used: 6052961519516 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
