>HUTG_VIBPA (Q87Q75) Formimidoylglutamase (EC 3.5.3.8) (Formiminoglutamase)|
           (Formiminoglutamate hydrolase)
          Length = 340

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/36 (33%), Positives = 19/36 (52%)
 Frame = +1

Query: 10  KSADTKHFWYLAEQEVCRSNHIQHMNQLGQFKDKID 117
           + AD  + WY+ + ++   NH  H+ QL  F D  D
Sbjct: 215 QKADELNVWYVEDSQLNYLNHSYHLTQLQHFIDDCD 250

>IKKB_MOUSE (O88351) Inhibitor of nuclear factor kappa B kinase beta subunit|
           (EC 2.7.11.10) (I-kappa-B-kinase beta) (IkBKB)
           (IKK-beta) (IKK-B) (I-kappa-B kinase 2) (IKK2) (Nuclear
           factor NF-kappa-B inhibitor kinase beta) (NFKBIKB)
          Length = 757

 Score = 28.5 bits (62), Expect = 4.7
 Identities = 18/40 (45%), Positives = 23/40 (57%)
 Frame = -3

Query: 177 QQNKENSFPQNDCDYIPFRFIDFILELP*LVHVLNVVTST 58
           Q+  +  +  N C    FR +D IL L  LVHVLN+VT T
Sbjct: 287 QRGTDPQYGPNGC----FRALDDILNLK-LVHVLNMVTGT 321

>SULU_CAEEL (P46549) Serine/threonine-protein kinase SULU (EC 2.7.11.1)|
           (Protein kinase 18)
          Length = 982

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 10  KSADTKHFWYLAEQEVCRSNHIQHMNQLGQFKDKIDETE 126
           +  DT+H     + E+ R   IQH+N+L   K +  ET+
Sbjct: 716 RQMDTRHGLLSKQHEMTRDLEIQHLNELHAMKKRHLETQ 754

>TF2B_ARCFU (O28970) Transcription initiation factor IIB (TFIIB)|
          Length = 326

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +1

Query: 190 FLTQDTGLGFQDQEDGAGPAWRA 258
           F+ QD GL  +D    AGP WRA
Sbjct: 47  FICQDCGLVIEDTYIDAGPEWRA 69

>RXINP_MOUSE (Q5U5Q9) Retinoid X receptor-interacting protein 110|
          Length = 727

 Score = 28.1 bits (61), Expect = 6.2
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +1

Query: 7   RKSADTKHFWYLAEQEVCRSNHIQHMNQLGQFKDKIDETE 126
           + S  T+  W L    +C+ +H+   N+  Q K+  D  E
Sbjct: 148 KDSGTTEGVWQLVPPSLCKGSHVSQGNEAEQRKEPWDHNE 187

>IKKB_RAT (Q9QY78) Inhibitor of nuclear factor kappa B kinase beta subunit|
           (EC 2.7.11.1) (I-kappa-B-kinase beta) (IkBKB) (IKK-beta)
           (IKK-B) (I-kappa-B kinase 2) (IKK2) (Nuclear factor
           NF-kappa-B inhibitor kinase beta) (NFKBIKB)
          Length = 757

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = -3

Query: 177 QQNKENSFPQNDCDYIPFRFIDFILELP*LVHVLNVVTST 58
           Q+  +  +  N C    FR +D IL L  LVH+LN+VT T
Sbjct: 287 QRGVDPQYGPNGC----FRALDDILNLK-LVHILNMVTGT 321


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.316    0.133    0.416 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,339,111
Number of Sequences: 219361
Number of extensions: 505728
Number of successful extensions: 1357
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1345
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1357
length of database: 80,573,946
effective HSP length: 62
effective length of database: 66,973,564
effective search space used: 1607365536
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)