>RDRP_LYCVA (P14240) RNA-directed RNA polymerase (EC 2.7.7.48)|
          Length = 2210

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = -2

Query: 124 NYAPEREPALLSI-GIPLLLQCLQAPDCTMH*CTPKHD 14
           N+  +REP ++ I G+ LL +C++        CT  HD
Sbjct: 28  NFLGQREPRMVLIEGLKLLSRCIEIDSADKSGCTHNHD 65

>LUXD1_PHOLE (P21309) Acyl transferase (EC 2.3.1.-) (ACT)|
           (Myristoyl-ACP-specific thioesterase) (C14ACP-TE)
          Length = 315

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 21/65 (32%), Positives = 30/65 (46%)
 Frame = +1

Query: 169 HNNSYLSEGMIKRTMMSGKSILPIYSTAASFVVLRIAMSNHGGLAVGDGKQFLASSESET 348
           +N   ++ G  +R  M   + L  Y     F V+R    NH GL+ G+ KQF  S    +
Sbjct: 37  NNTIVIASGFARR--MDHFAGLAEYLANNGFRVIRYDSLNHVGLSSGEIKQFSMSVGKHS 94

Query: 349 LLCFI 363
           LL  I
Sbjct: 95  LLTVI 99

>GUAA_GLOVI (Q7NHC2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)|
           (Glutamine amidotransferase) (GMP synthetase)
          Length = 551

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = -2

Query: 121 YAPEREPALLSIGIPLLLQC 62
           YAP+ +PAL  +GIP+L  C
Sbjct: 95  YAPQCDPALWELGIPILGVC 114

>5NT1B_HUMAN (Q96P26) Cytosolic 5'-nucleotidase 1B (EC 3.1.3.5) (Cytosolic|
           5'-nucleotidase IB) (cN1B) (cN-IB) (Autoimmune
           infertility-related protein)
          Length = 610

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = -2

Query: 352 GESHSLKRPGIACRRRQQGHRGCSLRFGEQQNSLRLNKSGGLIYRSSW 209
           G  H+++     C   +QG +   +R G Q++SLR   S G + RS W
Sbjct: 75  GPCHTIRIYIHMCLLWEQGQQITMMR-GSQESSLRKTDSRGYLVRSQW 121

>REG3B_RAT (P25031) Regenerating islet-derived protein 3 beta precursor (Reg|
           III-beta) (Pancreatitis-associated protein 1) (Peptide
           23) (REG-2)
          Length = 175

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = -2

Query: 322 IACRRRQQGHRGCSLRFGEQQNSLRLNKSGGLIYRSSWCA*SSPLIG 182
           +AC++R +GH    L   E      + K+ G  Y+ +W     P +G
Sbjct: 66  LACQKRPEGHLVSVLNVAEASFLASMVKNTGNSYQYTWIGLHDPTLG 112

>ENV_VILV1 (P23422) Env polyprotein (Coat polyprotein) [Contains: Leader|
           peptide; Exterior membrane glycoprotein; Transmembrane
           glycoprotein]
          Length = 989

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 261 CCSPNRNEQPRWPCCRRRQ 317
           C  P+RNE  +W C  RR+
Sbjct: 562 CSLPHRNESNKWTCAARRK 580

>PRR1_ORYSA (Q689G9) Two-component response regulator-like PRR1|
           (Pseudo-response regulator 1) (OsPRR1)
          Length = 518

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +1

Query: 292 GGLAVGDGKQFLASSESETLLC 357
           GG AVG G+QF+  S+   LLC
Sbjct: 12  GGAAVGGGQQFVDRSKVRILLC 33

>J1L_HCMVA (P17143) Hypothetical protein J1L|
          Length = 309

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = -1

Query: 149 ESSCKDMKQLRTRKRTCSSFYWNSIATSMSTSTRLHHALMHTKT*FC 9
           E+ C+         R C+    ++  T+++T +R HHA  H +   C
Sbjct: 87  EARCRQQIPWDDTHRQCAGSVGHNTLTALNTPSRTHHAAPHRRCFGC 133


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,032,413
Number of Sequences: 219361
Number of extensions: 1114259
Number of successful extensions: 2445
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2444
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)