Clone Name | rbart50a04 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_967076.1| PREDICTED: Tribolium castaneum similar to CG33653-PA, isoform A (LOC660877), mRNA Length = 4323 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 39 atggtgcaatctggtgcttgt 59 ||||||||||||||||||||| Sbjct: 613 atggtgcaatctggtgcttgt 633
>gb|AE011914.1| Xanthomonas axonopodis pv. citri str. 306, section 292 of 469 of the complete genome Length = 10174 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 291 cggtggccttgctgtcggcgacggc 315 |||||||||||||||||||| |||| Sbjct: 5815 cggtggccttgctgtcggcggcggc 5791
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ccgatttattcaaccgcagcg 255 ||||||||||||||||||||| Sbjct: 56000 ccgatttattcaaccgcagcg 55980
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 atgagcaaccacggtggcct 299 |||||||||||||||||||| Sbjct: 618915 atgagcaaccacggtggcct 618934
>ref|NM_031197.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2 (Slc2a2), mRNA Length = 2491 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1607 aattcctggcgtcttcagagagtg 1630
>gb|AC121268.7| Mus musculus chromosome 3, clone RP24-468O23, complete sequence Length = 176264 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 18188 aattcctggcgtcttcagagagtg 18165
>emb|BX511147.12| Zebrafish DNA sequence from clone DKEYP-36E3 in linkage group 25, complete sequence Length = 150385 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 tgttttggtgtgcatcagtgcatg 41 |||||| ||||||||||||||||| Sbjct: 27260 tgtttttgtgtgcatcagtgcatg 27237
>gb|BC034675.1| Mus musculus solute carrier family 2 (facilitated glucose transporter), member 2, mRNA (cDNA clone MGC:25413 IMAGE:4236331), complete cds Length = 2468 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1577 aattcctggcgtcttcagagagtg 1600
>dbj|AK149532.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730032F11 product:solute carrier family 2 (facilitated glucose transporter), member 2, full insert sequence Length = 1651 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 771 aattcctggcgtcttcagagagtg 794
>dbj|AK165430.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F520013J12 product:solute carrier family 2 (facilitated glucose transporter), member 2, full insert sequence Length = 2503 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1593 aattcctggcgtcttcagagagtg 1616
>dbj|AK005068.1| Mus musculus adult male liver cDNA, RIKEN full-length enriched library, clone:1300019L19 product:solute carrier family 2 (facilitated glucose transporter), member 2, full insert sequence Length = 2538 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1659 aattcctggcgtcttcagagagtg 1682
>gb|AC022472.2|T20H2 Sequence of BAC T20H2 from Arabidopsis thaliana chromosome 1, complete sequence Length = 92710 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttggtgtgcatcagtgcatg 41 |||||||||||||||||||| Sbjct: 72149 ttggtgtgcatcagtgcatg 72168
>dbj|AP004469.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT15D01, TM0004a, complete sequence Length = 92631 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 tgcagcaagcactagcagct 384 |||||||||||||||||||| Sbjct: 67539 tgcagcaagcactagcagct 67558
>emb|X16986.1|MURGLUC Murine mRNA for liver glucose transporter Length = 2183 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1597 aattcctggcgtcttcagagagtg 1620
>emb|X15684.1|MMGLUTRA Mouse mRNA for liver-type glucose transporter protein Length = 2491 Score = 40.1 bits (20), Expect = 5.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 320 aattcctggcctcttcagagagtg 343 |||||||||| ||||||||||||| Sbjct: 1607 aattcctggcgtcttcagagagtg 1630
>gb|M84702.1|ATHTUB5B Arabidopsis thaliana beta-5 tubulin (TUB5) gene, complete cds Length = 3026 Score = 40.1 bits (20), Expect = 5.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 22 ttggtgtgcatcagtgcatg 41 |||||||||||||||||||| Sbjct: 1094 ttggtgtgcatcagtgcatg 1113 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,650,799 Number of Sequences: 3902068 Number of extensions: 3650799 Number of successful extensions: 74114 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 74081 Number of HSP's gapped (non-prelim): 33 length of query: 392 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 370 effective length of database: 17,147,199,772 effective search space: 6344463915640 effective search space used: 6344463915640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)