ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49h11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1HIS7_HAEIN (P44327) Histidine biosynthesis bifunctional protein ... 28 8.1

>HIS7_HAEIN (P44327) Histidine biosynthesis bifunctional protein hisB|
           [Includes: Histidinol-phosphatase (EC 3.1.3.15);
           Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)
           (IGPD)]
          Length = 362

 Score = 27.7 bits (60), Expect = 8.1
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = +3

Query: 3   KHFFQAVLYNVNAVLYRQTTGNN 71
           +HFFQ++ +++ A L+   TGNN
Sbjct: 306 EHFFQSLAFSMLATLHLNVTGNN 328


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,969,046
Number of Sequences: 219361
Number of extensions: 659238
Number of successful extensions: 1384
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1369
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 80,573,946
effective HSP length: 61
effective length of database: 67,192,925
effective search space used: 1612630200
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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