Clone Name | rbart49h11 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 tctcaactaattaataacaacc 112 |||||||||||||||||||||| Sbjct: 404415 tctcaactaattaataacaacc 404436
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 tctcaactaattaataacaacc 112 |||||||||||||||||||||| Sbjct: 404415 tctcaactaattaataacaacc 404436
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 44.1 bits (22), Expect = 0.21 Identities = 22/22 (100%) Strand = Plus / Plus Query: 91 tctcaactaattaataacaacc 112 |||||||||||||||||||||| Sbjct: 111733 tctcaactaattaataacaacc 111754
>emb|AL935181.5| Zebrafish DNA sequence from clone CH211-162K9, complete sequence Length = 156592 Score = 42.1 bits (21), Expect = 0.84 Identities = 21/21 (100%) Strand = Plus / Plus Query: 93 tcaactaattaataacaacca 113 ||||||||||||||||||||| Sbjct: 6271 tcaactaattaataacaacca 6291
>ref|NM_121696.2| Arabidopsis thaliana kinase AT5G16900 mRNA, complete cds Length = 2601 Score = 40.1 bits (20), Expect = 3.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 ttggatttccatcaaactccaact 222 |||||||||| ||||||||||||| Sbjct: 1489 ttggatttccttcaaactccaact 1466
>gb|AC009370.7| Drosophila melanogaster 3L BAC RP98-35F4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 174919 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 catttatgtatatagctgcc 162 |||||||||||||||||||| Sbjct: 27465 catttatgtatatagctgcc 27484
>gb|AC009368.8| Drosophila melanogaster 3L BAC RP98-4F7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 158816 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 catttatgtatatagctgcc 162 |||||||||||||||||||| Sbjct: 148132 catttatgtatatagctgcc 148151
>gb|AC021659.16| Homo sapiens 3 BAC RP11-446K3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 101800 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 gtgctgctaacagggatgct 135 |||||||||||||||||||| Sbjct: 83980 gtgctgctaacagggatgct 83961
>gb|AE003520.4| Drosophila melanogaster chromosome 3L, section 65 of 83 of the complete sequence Length = 275124 Score = 40.1 bits (20), Expect = 3.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 catttatgtatatagctgcc 162 |||||||||||||||||||| Sbjct: 70900 catttatgtatatagctgcc 70919 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,044,853 Number of Sequences: 3902068 Number of extensions: 2044853 Number of successful extensions: 37244 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 9 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 37210 Number of HSP's gapped (non-prelim): 34 length of query: 257 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 235 effective length of database: 17,147,199,772 effective search space: 4029591946420 effective search space used: 4029591946420 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)