>emb|CT027658.2| Macaca mulatta chromosome 9 BAC CH250-8G3, complete sequence
          Length = 148950

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tctgtcatcatgctagaaaa 80
             ||||||||||||||||||||
Sbjct: 39875 tctgtcatcatgctagaaaa 39856

>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 67     atcatgctagaaaattttct 86
              ||||||||||||||||||||
Sbjct: 279047 atcatgctagaaaattttct 279028

>emb|AL354709.15| Human DNA sequence from clone RP11-145E5 on chromosome 9 Contains the
             5' end of the CDKN2B gene for cyclin-dependent kinase
             inhibitor 2B (p15, inhibits CDK4), a ubiquitin A-52
             residue ribosomal protein fusion product 1 (UBA52) (RPL40)
             pseudogene, the 3' end of a variant of the MTAP gene for
             methylthioadenosine phosphorylase (MSAP), a novel gene and
             a CpG island, complete sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    tctgtcatcatgctagaaaa 80
             ||||||||||||||||||||
Sbjct: 55747 tctgtcatcatgctagaaaa 55728

>dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23, map 22, complete
             sequences
          Length = 179114

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    atcatgctagaaaattttct 86
             ||||||||||||||||||||
Sbjct: 81037 atcatgctagaaaattttct 81018

>gb|AC136738.23| Mus musculus chromosome 6, clone RP23-173F22, complete sequence
          Length = 195153

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 7      agagggaggaatattgaagg 26
              ||||||||||||||||||||
Sbjct: 142472 agagggaggaatattgaagg 142453

>gb|AC140470.3| Mus musculus BAC clone RP24-396I22 from 6, complete sequence
          Length = 166343

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     agagggaggaatattgaagg 26
             ||||||||||||||||||||
Sbjct: 74309 agagggaggaatattgaagg 74290

>dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B749F18,
             LL56-APP region, complete sequence
          Length = 81450

 Score = 40.1 bits (20), Expect = 1.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    atcatgctagaaaattttct 86
             ||||||||||||||||||||
Sbjct: 15348 atcatgctagaaaattttct 15329

>ref|XM_716617.1| Candida albicans SC5314 hypothetical protein (CaO19_1633), mRNA
          Length = 2232

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 acataacccttcaatagat 139
           |||||||||||||||||||
Sbjct: 219 acataacccttcaatagat 201

>ref|XM_716497.1| Candida albicans SC5314 hypothetical protein (CaO19_9201), mRNA
          Length = 2232

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 121 acataacccttcaatagat 139
           |||||||||||||||||||
Sbjct: 219 acataacccttcaatagat 201

>gb|AC122224.4| Mus musculus BAC clone RP23-130L16 from chromosome 9, complete sequence
          Length = 200246

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    actgaatataaaacaaaac 53
             |||||||||||||||||||
Sbjct: 91932 actgaatataaaacaaaac 91914

>gb|AY316742.1| Zea mays poor homologous synapsis 1 protein (phs1) gene, complete
           cds
          Length = 6573

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 73  ctagaaaattttctatcat 91
           |||||||||||||||||||
Sbjct: 112 ctagaaaattttctatcat 94

>gb|AC165173.2| Zea mays clone ZMMBBb-125O19, complete sequence
          Length = 157660

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 73    ctagaaaattttctatcat 91
             |||||||||||||||||||
Sbjct: 84390 ctagaaaattttctatcat 84372

>emb|AL157401.11| Human DNA sequence from clone RP5-1051H14 on chromosome 10p14-15.1
             Contains a heat shock protein pseudogene and a novel gene,
             complete sequence
          Length = 130780

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 123   ataacccttcaatagatgt 141
             |||||||||||||||||||
Sbjct: 73056 ataacccttcaatagatgt 73038

>gb|AC110418.7| Homo sapiens 3 BAC RP11-711F20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 148914

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 123    ataacccttcaatagatgt 141
              |||||||||||||||||||
Sbjct: 104670 ataacccttcaatagatgt 104652

>gb|AC107305.12| Homo sapiens 12 BAC RP11-605A10 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 9844

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 134  atagatgtgtattactgca 152
            |||||||||||||||||||
Sbjct: 2543 atagatgtgtattactgca 2525

>gb|AC165171.2| Zea mays clone CH201-145P10, complete sequence
          Length = 233369

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     ctagaaaattttctatcat 91
              |||||||||||||||||||
Sbjct: 207983 ctagaaaattttctatcat 207965

>gb|AC165178.2| Zea mays clone ZMMBBb-272P17, complete sequence
          Length = 131485

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 73     ctagaaaattttctatcat 91
              |||||||||||||||||||
Sbjct: 118476 ctagaaaattttctatcat 118494

>emb|BX936333.10| Zebrafish DNA sequence from clone CH211-90O16 in linkage group 3,
             complete sequence
          Length = 167766

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    actgaatataaaacaaaac 53
             |||||||||||||||||||
Sbjct: 62935 actgaatataaaacaaaac 62953

>emb|BX914211.5| Zebrafish DNA sequence from clone DKEY-91D10 in linkage group 3, complete
              sequence
          Length = 179226

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     actgaatataaaacaaaac 53
              |||||||||||||||||||
Sbjct: 171563 actgaatataaaacaaaac 171581

>gb|AC159101.2| Mus musculus BAC clone RP24-212G22 from chromosome 9, complete sequence
          Length = 183017

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 1     aggaatagagggaggaatattga 23
             ||||| |||||||||||||||||
Sbjct: 89023 aggaacagagggaggaatattga 89001

>gb|AC092945.6| Homo sapiens 12 BAC RP11-290O5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146969

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 115    aaatatacataacccttca 133
              |||||||||||||||||||
Sbjct: 143548 aaatatacataacccttca 143566

>gb|AC120104.4| Homo sapiens 12 BAC RP11-638F21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 110001

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 103   gaaaaccatgagaaatatacata 125
             ||||| |||||||||||||||||
Sbjct: 45036 gaaaaacatgagaaatatacata 45014

>gb|AC164624.3| Mus musculus 10 BAC RP24-324P5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 199853

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 31    cagcactgaatataaaaca 49
             |||||||||||||||||||
Sbjct: 17510 cagcactgaatataaaaca 17492

>emb|BX322589.16| Zebrafish DNA sequence from clone CH211-283F6 in linkage group 17,
             complete sequence
          Length = 153573

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 99    acatgaaaaccatgagaaa 117
             |||||||||||||||||||
Sbjct: 59583 acatgaaaaccatgagaaa 59601

>gb|AC158642.8| Mus musculus 10 BAC RP23-475H6 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 183526

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     cagcactgaatataaaaca 49
              |||||||||||||||||||
Sbjct: 110666 cagcactgaatataaaaca 110684

>gb|AC105311.3| Homo sapiens BAC clone RP11-15L11 from 4, complete sequence
          Length = 84552

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 115   aaatatacataacccttca 133
             |||||||||||||||||||
Sbjct: 48494 aaatatacataacccttca 48512

>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence
          Length = 366120

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 73     ctagaaaattttctatcat 91
              |||||||||||||||||||
Sbjct: 139845 ctagaaaattttctatcat 139827

>dbj|AK117075.1| Ciona intestinalis cDNA, clone:cits027d06, full insert sequence
          Length = 2043

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 34   cactgaatataaaacaaaa 52
            |||||||||||||||||||
Sbjct: 1172 cactgaatataaaacaaaa 1190

>emb|AL954140.7| Mouse DNA sequence from clone RP23-52I15 on chromosome 4, complete
             sequence
          Length = 98087

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 35    actgaatataaaacaaaac 53
             |||||||||||||||||||
Sbjct: 19575 actgaatataaaacaaaac 19593

>gb|AC131789.4| Mus musculus BAC clone RP24-444D19 from 10, complete sequence
          Length = 178210

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 31     cagcactgaatataaaaca 49
              |||||||||||||||||||
Sbjct: 164040 cagcactgaatataaaaca 164022

>dbj|AP000864.4| Homo sapiens genomic DNA, chromosome 18 clone:RP11-674N23, complete
             sequence
          Length = 171200

 Score = 38.2 bits (19), Expect = 7.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 30    tcagcactgaatataaaac 48
             |||||||||||||||||||
Sbjct: 24907 tcagcactgaatataaaac 24925


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,986,423
Number of Sequences: 3902068
Number of extensions: 1986423
Number of successful extensions: 138936
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 138854
Number of HSP's gapped (non-prelim): 82
length of query: 158
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 136
effective length of database: 17,147,199,772
effective search space: 2332019168992
effective search space used: 2332019168992
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)