>gb|BT017864.1| Zea mays clone EL01N0512A05.c mRNA sequence
          Length = 1184

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 281 attttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgca 327
           ||||||||| | ||||| ||||| || ||||||||||| ||||||||
Sbjct: 842 attttcttagcgacttgtttgggaatatcaaggtcatcttgcatgca 796

>gb|AY109270.1| Zea mays PCO088979 mRNA sequence
          Length = 1193

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 281 attttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgca 327
           ||||||||| | ||||| ||||| || ||||||||||| ||||||||
Sbjct: 857 attttcttagcgacttgtttgggaatatcaaggtcatcttgcatgca 811

>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20,
              complete sequence
          Length = 197237

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 91     aaatgctcaattcatacaagtt 112
              ||||||||||||||||||||||
Sbjct: 116804 aaatgctcaattcatacaagtt 116783

>emb|BX511234.7| Zebrafish DNA sequence from clone DKEY-96I8 in linkage group 10, complete
              sequence
          Length = 112069

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 91     aaatgctcaattcatacaagtt 112
              ||||||||||||||||||||||
Sbjct: 103520 aaatgctcaattcatacaagtt 103541

>gb|AC022453.5| Mus musculus strain C57BL6/J chromosome 6 clone RP23-253G12, complete
              sequence
          Length = 199642

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 161    ccatttacaacaacacacaga 181
              |||||||||||||||||||||
Sbjct: 102236 ccatttacaacaacacacaga 102256



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 161   ccatttacaacaacacacaga 181
             |||||||||||||||||||||
Sbjct: 48821 ccatttacaacaacacacaga 48841

>gb|AC098022.5| Rattus norvegicus 7 BAC CH230-53D11 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 233080

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    aacttgcttgggtatgtcaag 312
              |||||||||||||||||||||
Sbjct: 231248 aacttgcttgggtatgtcaag 231228

>gb|AC117971.7| Rattus norvegicus 7 BAC CH230-393L21 (Children's Hospital Oakland
           Research Institute) complete sequence
          Length = 80793

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 292 aacttgcttgggtatgtcaag 312
           |||||||||||||||||||||
Sbjct: 172 aacttgcttgggtatgtcaag 152

>emb|AJ576102.1|BAM576102 Bacillus amyloliquefaciens partial genome, strain FZB42
          Length = 122883

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    tgcgataagatgatgcatatc 361
              |||||||||||||||||||||
Sbjct: 107150 tgcgataagatgatgcatatc 107170

>dbj|AK076557.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched
           library, clone:4921508F21 product:unclassifiable, full
           insert sequence
          Length = 1582

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 161 ccatttacaacaacacacaga 181
           |||||||||||||||||||||
Sbjct: 427 ccatttacaacaacacacaga 407

>emb|AJ575417.1|BAM575417 Bacillus amyloliquefaciens kdg gene for KdgK protein
          Length = 122883

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    tgcgataagatgatgcatatc 361
              |||||||||||||||||||||
Sbjct: 107150 tgcgataagatgatgcatatc 107170

>gb|AC026457.8| Homo sapiens chromosome 16 clone RP11-105C20, complete sequence
          Length = 171477

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 9     aaatgctactatcaaattcat 29
             |||||||||||||||||||||
Sbjct: 75410 aaatgctactatcaaattcat 75430

>gb|AC154761.2| Mus musculus BAC clone RP24-416E4 from chromosome 17, complete sequence
          Length = 169027

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 189   tcatggacacataccatcaaacta 212
             |||||||| |||||||||||||||
Sbjct: 13480 tcatggactcataccatcaaacta 13503

>gb|AC132624.3| Mus musculus BAC clone RP23-77B21 from chromosome 18, complete sequence
          Length = 161099

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 250   atcttcactctgcacaccttcaac 273
             |||||||||||| |||||||||||
Sbjct: 68240 atcttcactctgaacaccttcaac 68217

>ref|XM_742883.1| Aspergillus fumigatus Af293 transcription initiation factor TFIID
           complex 60 kDa subunit (Afu5g03680) partial mRNA
          Length = 1338

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 259 ctgcacaccttcaacggcca 278
           ||||||||||||||||||||
Sbjct: 399 ctgcacaccttcaacggcca 380

>gb|AC145427.2| Rattus norvegicus chromosome 1 clone RP32-7K9 map q36, complete
             sequence
          Length = 154633

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 42    acacccatgaaaatacaagg 61
             ||||||||||||||||||||
Sbjct: 61823 acacccatgaaaatacaagg 61804

>gb|AC009755.7|ATAC009755 Arabidopsis thaliana chromosome III BAC F14P3 genomic sequence,
             complete sequence
          Length = 94369

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 202   ccatcaaactagggtgacta 221
             ||||||||||||||||||||
Sbjct: 45104 ccatcaaactagggtgacta 45123

>gb|AC121844.2| Mus musculus BAC clone RP24-81L3 from chromosome 10, complete sequence
          Length = 187443

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 111    ttcaatgccaacccaagctc 130
              ||||||||||||||||||||
Sbjct: 154104 ttcaatgccaacccaagctc 154085

>gb|AC151281.3| Mus musculus BAC clone RP24-144E8 from chromosome 17, complete
            sequence
          Length = 171820

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 189  tcatggacacataccatcaaacta 212
            |||||||| |||||||||||||||
Sbjct: 6166 tcatggactcataccatcaaacta 6143

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                           
Query: 282     ttttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgcagcgcagcaaggggt 341
               |||||||| ||| | ||||||| || ||||||||||| || ||||| ||| | ||||| |
Sbjct: 2583352 ttttcttagcaagtggcttgggaatatcaaggtcatcttggatgcaacgctgtaagggat 2583411

                   
Query: 342     gcga 345
               ||||
Sbjct: 2583412 gcga 2583415

>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0710H01
          Length = 187107

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 53/64 (82%)
 Strand = Plus / Plus

                                                                         
Query: 282   ttttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgcagcgcagcaaggggt 341
             |||||||| ||| | ||||||| || ||||||||||| || ||||| ||| | ||||| |
Sbjct: 38693 ttttcttagcaagtggcttgggaatatcaaggtcatcttggatgcaacgctgtaagggat 38752

                 
Query: 342   gcga 345
             ||||
Sbjct: 38753 gcga 38756

>dbj|AK068890.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023002O16, full
           insert sequence
          Length = 1042

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 53/64 (82%)
 Strand = Plus / Minus

                                                                       
Query: 282 ttttcttaacaacttgcttgggtatgtcaaggtcatcctgcatgcagcgcagcaaggggt 341
           |||||||| ||| | ||||||| || ||||||||||| || ||||| ||| | ||||| |
Sbjct: 853 ttttcttagcaagtggcttgggaatatcaaggtcatcttggatgcaacgctgtaagggat 794

               
Query: 342 gcga 345
           ||||
Sbjct: 793 gcga 790

>gb|AC140299.2| Mus musculus BAC clone RP23-363J15 from 10, complete sequence
          Length = 201657

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 111    ttcaatgccaacccaagctc 130
              ||||||||||||||||||||
Sbjct: 196577 ttcaatgccaacccaagctc 196596

>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    ggctgctggaaaccggagcg 247
              ||||||||||||||||||||
Sbjct: 657432 ggctgctggaaaccggagcg 657451


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,885,275
Number of Sequences: 3902068
Number of extensions: 3885275
Number of successful extensions: 71917
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 71830
Number of HSP's gapped (non-prelim): 87
length of query: 407
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 385
effective length of database: 17,147,199,772
effective search space: 6601671912220
effective search space used: 6601671912220
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)