ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49f09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_483633.1| Oryza sativa (japonica cultivar-group), mRNA 149 7e-33
2dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clon... 149 7e-33
3gb|L13655.1|SCFMEMPRO Saccharum hybrid cultivar H65-7052 membran... 115 1e-22
4gb|AY105455.1| Zea mays PCO077618 mRNA sequence 101 1e-18
5dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
6dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic D... 92 1e-15
7gb|AY105232.1| Zea mays PCO078286 mRNA sequence 80 5e-12
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
9dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
10dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic D... 68 2e-08
11dbj|AK071290.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
12dbj|AK059988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 2e-08
13emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4,... 56 8e-05
14dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 56 8e-05
15emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4,... 56 8e-05
16gb|BT019048.1| Zea mays clone Contig569.F mRNA sequence 46 0.077
17dbj|AB200415.1| Siphonosoma cumanense HTK gene for hypotaurocyam... 42 1.2
18dbj|AB186407.1| Siphonosoma cumanense mRNA for hypotaurocyamine ... 42 1.2
19gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome 40 4.7
20gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome 40 4.7
21emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on ch... 40 4.7
22emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 4.7
23gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete... 40 4.7
24dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 4.7
25emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chro... 40 4.7 
>ref|XM_483633.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1327

 Score =  149 bits (75), Expect = 7e-33
 Identities = 189/227 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
            |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992

                                                                        
Query: 186  cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 245
            || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| 
Sbjct: 991  caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932

                                                                        
Query: 246  agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 305
            ||||| ||||  |||||  |  |||||| | ||||||||||     |||||||| | |||
Sbjct: 931  agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872

                                                           
Query: 306  tgatcggtctgaggcaactcatggcgttccatccaaccaaattgagg 352
            ||||  ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 871  tgattagtctgaggcaactcatgacgttccatccaaccaaattgagg 825
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>dbj|AK061056.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-H06, full
            insert sequence
          Length = 1327

 Score =  149 bits (75), Expect = 7e-33
 Identities = 189/227 (83%)
 Strand = Plus / Minus

                                                                        
Query: 126  atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
            |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 1051 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 992

                                                                        
Query: 186  cagccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacc 245
            || |||||||| || ||||| ||||||||||||||| ||||| | | |||| ||||||| 
Sbjct: 991  caaccatcgtttccattcttccccttgaaaagcatcaccagggcaatcacaaacccaact 932

                                                                        
Query: 246  agcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggt 305
            ||||| ||||  |||||  |  |||||| | ||||||||||     |||||||| | |||
Sbjct: 931  agcagcaagaagagtgcaacagcccacaaaacatactggtatgctctgtactttcgtggt 872

                                                           
Query: 306  tgatcggtctgaggcaactcatggcgttccatccaaccaaattgagg 352
            ||||  ||||||||||||||||| |||||||||||||||||||||||
Sbjct: 871  tgattagtctgaggcaactcatgacgttccatccaaccaaattgagg 825
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>gb|L13655.1|SCFMEMPRO Saccharum hybrid cultivar H65-7052 membrane protein mRNA, complete
            cds
          Length = 1279

 Score =  115 bits (58), Expect = 1e-22
 Identities = 187/230 (81%)
 Strand = Plus / Minus

                                                                        
Query: 127  tctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggc 186
            |||| ||| ||||||||||| | || || |||||||||||||||||  ||||||||||||
Sbjct: 1101 tctaggtgttgcacttccacttagatgttggcacgcagttcaggtagtggcaccagtggc 1042

                                                                        
Query: 187  agccatcgttgccgttctttcccttgaaaagcatcgccaggccgaccacatacccaacca 246
            |||||||||| || ||||| || |||||||||||| ||||    | |||| ||||||| |
Sbjct: 1041 agccatcgttcccattcttccctttgaaaagcatcaccagtgaaatcacaaacccaacta 982

                                                                        
Query: 247  gcagaaagagcagtgccgcgccccacagagcatactggtacatcttgtactttgggggtt 306
             ||| ||||  |||||| |  |||||| |  |||||||||    |||||||| || ||||
Sbjct: 981  acagcaagacgagtgccacaacccacaaaatatactggtatgctttgtacttgggaggtt 922

                                                              
Query: 307  gatcggtctgaggcaactcatggcgttccatccaaccaaattgaggcctt 356
            | |  ||||| |||||||||||||| |||||||| | |||||||||||||
Sbjct: 921  ggttagtctgtggcaactcatggcgctccatccagctaaattgaggcctt 872
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>gb|AY105455.1| Zea mays PCO077618 mRNA sequence
          Length = 1387

 Score =  101 bits (51), Expect = 1e-18
 Identities = 177/219 (80%)
 Strand = Plus / Minus

                                                                        
Query: 138  cacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgttg 197
            ||||||||| |||| || |||||||||||||||||  ||||||| |||||||||||||| 
Sbjct: 1144 cacttccacttggatgttggcacgcagttcaggtagtggcaccaatggcagccatcgttc 1085

                                                                        
Query: 198  ccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagagc 257
            |||||||| || |||||||||||| ||||    | |||| ||||||| | ||| ||||  
Sbjct: 1084 ccgttcttccctttgaaaagcatcaccagtgaaatcacaaacccaactaacagcaagacg 1025

                                                                        
Query: 258  agtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctga 317
            |||||| |  |||||| |  |||||||||    |||||||| || ||||| |  || || 
Sbjct: 1024 agtgccacaacccacaaaatatactggtatgctttgtacttgggaggttggttagtgtgt 965

                                                   
Query: 318  ggcaactcatggcgttccatccaaccaaattgaggcctt 356
            ||||||||||| | ||||||||| | |||||||||||||
Sbjct: 964  ggcaactcatgactttccatccagctaaattgaggcctt 926
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                            
Query: 126      atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
                |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 27369086 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 27369145

                                                          
Query: 186      cagccatcgttgccgttctttcccttgaaaagcatcgccagg 227
                || |||||||| || ||||| ||||||||||||||| |||||
Sbjct: 27369146 caaccatcgtttccattcttccccttgaaaagcatcaccagg 27369187



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 292      tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 351
                |||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 27369456 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 27369515

                 
Query: 352      g 352
                |
Sbjct: 27369516 g 27369516
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>dbj|AP004163.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1323_A06
          Length = 95665

 Score = 91.7 bits (46), Expect = 1e-15
 Identities = 88/102 (86%)
 Strand = Plus / Plus

                                                                         
Query: 126   atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
             |||||||| ||||||||||| ||||| || || | ||||||||||||  |||||||||| 
Sbjct: 70613 atctaagtactgcacttccatctggatgttggtatgcagttcaggtagtggcaccagtga 70672

                                                       
Query: 186   cagccatcgttgccgttctttcccttgaaaagcatcgccagg 227
             || |||||||| || ||||| ||||||||||||||| |||||
Sbjct: 70673 caaccatcgtttccattcttccccttgaaaagcatcaccagg 70714



 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 292   tgtactttgggggttgatcggtctgaggcaactcatggcgttccatccaaccaaattgag 351
             |||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||||||
Sbjct: 70983 tgtactttcgtggttgattagtctgaggcaactcatgacgttccatccaaccaaattgag 71042

              
Query: 352   g 352
             |
Sbjct: 71043 g 71043
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>gb|AY105232.1| Zea mays PCO078286 mRNA sequence
          Length = 593

 Score = 79.8 bits (40), Expect = 5e-12
 Identities = 172/216 (79%)
 Strand = Plus / Minus

                                                                       
Query: 137 gcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgtt 196
           ||||||||| |||||||| || ||||||||||||||  |||||||||||||||  |||||
Sbjct: 289 gcacttccatctggacgttggtacgcagttcaggtaatggcaccagtggcagctgtcgtt 230

                                                                       
Query: 197 gccgttctttcccttgaaaagcatcgccaggccgaccacatacccaaccagcagaaagag 256
            || ||||| ||| |||| |||||  ||| |   |   || ||||||| | ||| |||||
Sbjct: 229 cccattcttacccgtgaagagcatgaccaagataatggcaaacccaactaccagcaagag 170

                                                                       
Query: 257 cagtgccgcgccccacagagcatactggtacatcttgtactttgggggttgatcggtctg 316
            ||||| ||  ||||||   |||||||||||   ||||||||||| ||||||   |||||
Sbjct: 169 gagtgcagcaacccacaagacatactggtacgatttgtactttggaggttgactagtctg 110

                                               
Query: 317 aggcaactcatggcgttccatccaaccaaattgagg 352
           ||| | |||   ||||||||||||||||||||||||
Sbjct: 109 aggtagctcgctgcgttccatccaaccaaattgagg 74
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                            
Query: 136      tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 195
                ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 20248680 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 20248739

                                          
Query: 196      tgccgttctttcccttgaaaagcatc 221
                | || ||||| |||||||| ||||||
Sbjct: 20248740 ttccattcttacccttgaagagcatc 20248765



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                       
Query: 318      ggcaactcatggcgttccatccaaccaaattgaggcctt 356
                ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 20249060 ggcaactcatgtcgttccatccaaccaaactgtggcctt 20249098
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>dbj|AP005681.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1439_F07
          Length = 153743

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                         
Query: 136   tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 195
             ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 27807 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 27866

                                       
Query: 196   tgccgttctttcccttgaaaagcatc 221
             | || ||||| |||||||| ||||||
Sbjct: 27867 ttccattcttacccttgaagagcatc 27892



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                    
Query: 318   ggcaactcatggcgttccatccaaccaaattgaggcctt 356
             ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 28187 ggcaactcatgtcgttccatccaaccaaactgtggcctt 28225
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>dbj|AP005864.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0047P18
          Length = 169128

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Plus

                                                                          
Query: 136    tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 195
              ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 142180 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 142239

                                        
Query: 196    tgccgttctttcccttgaaaagcatc 221
              | || ||||| |||||||| ||||||
Sbjct: 142240 ttccattcttacccttgaagagcatc 142265



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Plus

                                                     
Query: 318    ggcaactcatggcgttccatccaaccaaattgaggcctt 356
              ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 142560 ggcaactcatgtcgttccatccaaccaaactgtggcctt 142598
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>dbj|AK071290.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023087M04, full
            insert sequence
          Length = 1263

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 136  tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 195
            ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 1060 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 1001

                                      
Query: 196  tgccgttctttcccttgaaaagcatc 221
            | || ||||| |||||||| ||||||
Sbjct: 1000 ttccattcttacccttgaagagcatc 975



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 318 ggcaactcatggcgttccatccaaccaaattgaggcctt 356
           ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 878 ggcaactcatgtcgttccatccaaccaaactgtggcctt 840
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>dbj|AK059988.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-H11, full
            insert sequence
          Length = 1266

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 73/86 (84%)
 Strand = Plus / Minus

                                                                        
Query: 136  tgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtggcagccatcgt 195
            ||||||||||| | || ||||| ||||||||||||||  ||||||||||||| || || |
Sbjct: 1042 tgcacttccacttcgatgtgggtacgcagttcaggtagtggcaccagtggcatccgtcat 983

                                      
Query: 196  tgccgttctttcccttgaaaagcatc 221
            | || ||||| |||||||| ||||||
Sbjct: 982  ttccattcttacccttgaagagcatc 957



 Score = 54.0 bits (27), Expect = 3e-04
 Identities = 36/39 (92%)
 Strand = Plus / Minus

                                                  
Query: 318 ggcaactcatggcgttccatccaaccaaattgaggcctt 356
           ||||||||||| ||||||||||||||||| || ||||||
Sbjct: 860 ggcaactcatgtcgttccatccaaccaaactgtggcctt 822
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>emb|AL731595.1|OSJN00238 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M21,
              complete sequence
          Length = 151218

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                          
Query: 126    atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
              |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 100774 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 100833

                                                  
Query: 186    cagccatcgttgccgttctttcccttgaaaagcatc 221
              || |||||||| ||  |||| ||||| |||||||||
Sbjct: 100834 caaccatcgtttccagtcttccccttcaaaagcatc 100869
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                            
Query: 126      atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
                |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 13106961 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 13107020

                                                    
Query: 186      cagccatcgttgccgttctttcccttgaaaagcatc 221
                || |||||||| ||  |||| ||||| |||||||||
Sbjct: 13107021 caaccatcgtttccagtcttccccttcaaaagcatc 13107056
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>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23,
             complete sequence
          Length = 165683

 Score = 56.0 bits (28), Expect = 8e-05
 Identities = 79/96 (82%)
 Strand = Plus / Plus

                                                                         
Query: 126   atctaagtgctgcacttccacctggacgtgggcacgcagttcaggtaccggcaccagtgg 185
             |||||| | ||||||||||| ||||| || |||| |||||||| |||  |||| ||||| 
Sbjct: 39171 atctaaatactgcacttccatctggatgttggcatgcagttcatgtagtggcagcagtgt 39230

                                                 
Query: 186   cagccatcgttgccgttctttcccttgaaaagcatc 221
             || |||||||| ||  |||| ||||| |||||||||
Sbjct: 39231 caaccatcgtttccagtcttccccttcaaaagcatc 39266
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>gb|BT019048.1| Zea mays clone Contig569.F mRNA sequence
          Length = 928

 Score = 46.1 bits (23), Expect = 0.077
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 318 ggcaactcatggcgttccatccaaccaaattgaggcctt 356
           ||||||||||| | ||||||||| | |||||||||||||
Sbjct: 419 ggcaactcatgactttccatccagctaaattgaggcctt 457
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>dbj|AB200415.1| Siphonosoma cumanense HTK gene for hypotaurocyamine kinase,
           complete cds
          Length = 2524

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 catggcgttccatccaaccaa 345
           |||||||||||||||||||||
Sbjct: 257 catggcgttccatccaaccaa 277
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>dbj|AB186407.1| Siphonosoma cumanense mRNA for hypotaurocyamine kinase, complete
           cds
          Length = 1668

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 325 catggcgttccatccaaccaa 345
           |||||||||||||||||||||
Sbjct: 310 catggcgttccatccaaccaa 330
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>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ggcagccatcgttgccgttc 203
              ||||||||||||||||||||
Sbjct: 109123 ggcagccatcgttgccgttc 109142
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>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    ggcagccatcgttgccgttc 203
              ||||||||||||||||||||
Sbjct: 108932 ggcagccatcgttgccgttc 108951
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>emb|AL365356.13| Human DNA sequence from clone RP11-336A10 on chromosome 10 Contains the
             ASB13 gene for ankyrin repeat and SOCS box-containing 13,
             the 5' end of gene FLJ20360 (KIAA2006 FLJ34073 FLJ12904
             FLJ23361 FLJ21109), three novel genes, a ribosomal protein
             L23a (RPL23A) pseudogene, the 5' end of a novel gene and
             two CpG islands, complete sequence
          Length = 167676

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 60    ctgtaaacacacaataaaaa 79
             ||||||||||||||||||||
Sbjct: 84067 ctgtaaacacacaataaaaa 84086
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 255    agcagtgccgcgccccacag 274
              ||||||||||||||||||||
Sbjct: 120193 agcagtgccgcgccccacag 120174
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>gb|AC024023.4| Homo sapiens BAC clone RP11-83C7 from 4, complete sequence
          Length = 159875

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 62    gtaaacacacaataaaaatg 81
             ||||||||||||||||||||
Sbjct: 97098 gtaaacacacaataaaaatg 97117
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 179    ccagtggcagccatcgttgc 198
              ||||||||||||||||||||
Sbjct: 202876 ccagtggcagccatcgttgc 202857
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>emb|AL160161.10| Human DNA sequence from clone RP1-188D3 on chromosome 6, complete
             sequence
          Length = 72159

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    acaataaaaatggctctccg 89
             ||||||||||||||||||||
Sbjct: 29267 acaataaaaatggctctccg 29286


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,717,073
Number of Sequences: 3902068
Number of extensions: 2717073
Number of successful extensions: 46739
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 46625
Number of HSP's gapped (non-prelim): 113
length of query: 356
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 334
effective length of database: 17,147,199,772
effective search space: 5727164723848
effective search space used: 5727164723848
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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