ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart49f08 |
|---|---|
| Clone Library Name | barley_pub |
>GUB2_HORVU (P12257) Lichenase-2 precursor (EC 3.2.1.73) (Lichenase II)| (Endo-beta-1,3-1,4 glucanase II) ((1->3,1->4)-beta-glucanase isoenzyme EII) (Fragment) Length = 312 Score = 61.6 bits (148), Expect = 1e-09 Identities = 25/27 (92%), Positives = 27/27 (100%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 ENQKD+GVEQNWGLFYPNMQHVYPI+F Sbjct: 286 ENQKDSGVEQNWGLFYPNMQHVYPINF 312
>E13F_HORVU (Q02439) Putative glucan endo-1,3-beta-glucosidase GVI precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase GVI) ((1->3)-beta-glucanase isoenzyme GVI) (Beta-1,3-endoglucanase GVI) (Fragment) Length = 321 Score = 39.7 bits (91), Expect = 0.004 Identities = 16/27 (59%), Positives = 20/27 (74%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 ENQK GVEQN+G+F P+M VY + F Sbjct: 290 ENQKPEGVEQNFGMFQPDMSQVYHVDF 316
>E13B_PEA (Q03467) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 370 Score = 35.4 bits (80), Expect = 0.073 Identities = 14/27 (51%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 ENQK +E+++G+FYPN Q YP F Sbjct: 320 ENQKSPELEKHFGVFYPNKQKKYPFGF 346
>E13E_HORVU (Q02438) Glucan endo-1,3-beta-glucosidase GV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GV) ((1->3)-beta-glucanase isoenzyme GV) (Beta-1,3-endoglucanase GV) Length = 316 Score = 34.7 bits (78), Expect = 0.12 Identities = 16/28 (57%), Positives = 21/28 (75%), Gaps = 1/28 (3%) Frame = -2 Query: 463 ENQKDNG-VEQNWGLFYPNMQHVYPISF 383 EN+K VE+N+GLF+PN Q VYP +F Sbjct: 287 ENRKPGDEVERNFGLFFPNKQPVYPTTF 314
>GUB_NICPL (P07979) Lichenase precursor (EC 3.2.1.73) (Endo-beta-1,3-1,4| glucanase) Length = 370 Score = 33.5 bits (75), Expect = 0.28 Identities = 14/27 (51%), Positives = 20/27 (74%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q YP+SF Sbjct: 320 ENNKNPELEKHFGLFSPNKQPKYPLSF 346
>E13H_TOBAC (P36401) Glucan endo-1,3-beta-glucosidase, acidic isoform PR-Q'| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PR-35) Length = 339 Score = 33.1 bits (74), Expect = 0.36 Identities = 15/27 (55%), Positives = 20/27 (74%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 E+QKD +E+++GLF NMQ Y ISF Sbjct: 312 EDQKDPEIEKHFGLFSANMQPKYQISF 338
>E13B_PRUPE (P52408) Glucan endo-1,3-beta-glucosidase, basic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (PpGns1) Length = 350 Score = 32.3 bits (72), Expect = 0.62 Identities = 14/27 (51%), Positives = 18/27 (66%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN+K +E++WGLF P Q Y ISF Sbjct: 323 ENRKTPELEKHWGLFSPTKQPKYQISF 349
>E134_ARATH (Q94CD8) Putative glucan endo-1,3-beta-glucosidase 4 precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Beta-1,3-glucanase) Length = 505 Score = 32.3 bits (72), Expect = 0.62 Identities = 13/24 (54%), Positives = 17/24 (70%) Frame = -2 Query: 439 EQNWGLFYPNMQHVYPISF**GSS 368 E+NWG+ +PN VYP+S GSS Sbjct: 329 ERNWGILFPNGTSVYPLSLSGGSS 352
>E13A_ARATH (P33157) Glucan endo-1,3-beta-glucosidase, acidic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Pathogenesis-related protein 2) (PR-2) (Beta-1,3-glucanase 2) Length = 339 Score = 32.0 bits (71), Expect = 0.81 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN+K+ E+ WGLF+P+ Q Y ++F Sbjct: 312 ENKKEPTYEKFWGLFHPDRQSKYEVNF 338
>E13C_HORVU (Q02126) Glucan endo-1,3-beta-glucosidase GIII precursor (EC| 3.2.1.39) ((1->3)-beta-glucan endohydrolase GIII) ((1->3)-beta-glucanase isoenzyme GIII) (Beta-1,3-endoglucanase GIII) Length = 330 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%) Frame = -2 Query: 463 ENQKDNG-VEQNWGLFYPNMQHVYPISF 383 EN KD +E+N+GLF PNM Y I+F Sbjct: 303 ENLKDGDELEKNFGLFKPNMSPAYAITF 330
>E13B_PHAVU (P23535) Glucan endo-1,3-beta-glucosidase, basic isoform precursor| (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 348 Score = 30.8 bits (68), Expect = 1.8 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 ENQK +E+++GLF P+ + YP F Sbjct: 289 ENQKSPEIEKHFGLFKPSKEKKYPFGF 315
>E13D_HORVU (Q02437) Glucan endo-1,3-beta-glucosidase GIV (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase GIV) ((1->3)-beta-glucanase isoenzyme GIV) (Beta-1,3-endoglucanase GIV) Length = 327 Score = 30.8 bits (68), Expect = 1.8 Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -2 Query: 463 ENQKDN-GVEQNWGLFYPNMQHVYPISF 383 ENQK E+++GLFYPN + VY I+F Sbjct: 281 ENQKPGLETERHFGLFYPNKRPVYHINF 308
>E13B_HEVBR (P52407) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) [Contains: Glucan endo-1,3-beta-glucosidase minor form 3; Glucan endo Length = 374 Score = 30.0 bits (66), Expect = 3.1 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN+K VE+++GLF+PN Y ++F Sbjct: 325 ENKKQPEVEKHFGLFFPNKWQKYNLNF 351
>PHK_MYCPA (Q73ZM8) Probable phosphoketolase (EC 4.1.2.-)| Length = 804 Score = 29.6 bits (65), Expect = 4.0 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = -2 Query: 304 AHIMYCT-GLGLGTWDATAEAAQMRTRVVVACYTSVP 197 A I +CT GLG+ W +TA + VV+AC +P Sbjct: 602 AAIAHCTRGLGIWDWASTARSIGAEPDVVLACAGDIP 638
>E13E_TOBAC (P23546) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GGIB50 precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLA) Length = 370 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y I+F Sbjct: 321 ENNKNPELEKHFGLFSPNKQPKYNINF 347
>E13B_TOBAC (P15797) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 371 Score = 29.6 bits (65), Expect = 4.0 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y I+F Sbjct: 322 ENNKNPELEKHFGLFSPNKQPKYNINF 348
>THT1_SCHPO (Q09684) Nuclear fusion protein tht1| Length = 577 Score = 29.3 bits (64), Expect = 5.2 Identities = 12/35 (34%), Positives = 19/35 (54%) Frame = +2 Query: 149 RGSVCICFPSIENHTYWYTSIASHYYSRTHLSCLS 253 RGS C +E+ + W+ S SH++ HL L+ Sbjct: 114 RGSQSECVSKLESTSTWWLSFTSHFHDVNHLCRLA 148
>ENGC1_BACTN (Q8A5I9) Probable GTPase engC protein 1 (EC 3.6.1.-)| Length = 310 Score = 29.3 bits (64), Expect = 5.2 Identities = 15/46 (32%), Positives = 26/46 (56%) Frame = -2 Query: 202 VPVRMIFDGREAYANAPPSSIDHALDTYTHVCVPRNYIVGFKISSK 65 VPV+++F+ +AY +D ++ YTH+ P FK+S+K Sbjct: 119 VPVKLVFNKVDAYNEDELRYLDALINLYTHIGYP-----CFKVSAK 159
>E132_SOLTU (P52401) Glucan endo-1,3-beta-glucosidase, basic isoform 2| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 363 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y ++F Sbjct: 313 ENNKNPELEKHFGLFSPNKQPKYNLNF 339
>E131_SOLTU (P52400) Glucan endo-1,3-beta-glucosidase, basic isoform 1| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 337 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y ++F Sbjct: 287 ENNKNPELEKHFGLFSPNKQPKYNLNF 313
>E133_SOLTU (P52402) Glucan endo-1,3-beta-glucosidase, basic isoform 3| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) (Fragment) Length = 328 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y ++F Sbjct: 278 ENNKNPELEKHFGLFSPNKQPKYNLNF 304
>E13F_TOBAC (P27666) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| GLB precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) (Glucanase GLB) Length = 370 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y ++F Sbjct: 321 ENNKNPELEKHFGLFSPNKQPKYNLNF 347
>E13B_NICPL (P23431) Glucan endo-1,3-beta-glucosidase, basic vacuolar isoform| precursor (EC 3.2.1.39) ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase, basic) Length = 365 Score = 28.9 bits (63), Expect = 6.8 Identities = 12/27 (44%), Positives = 19/27 (70%) Frame = -2 Query: 463 ENQKDNGVEQNWGLFYPNMQHVYPISF 383 EN K+ +E+++GLF PN Q Y ++F Sbjct: 321 ENNKNPELEKHFGLFSPNKQPKYNLNF 347
>E13C_TOBAC (P23432) Glucan endo-1,3-beta-glucosidase precursor (EC 3.2.1.39)| ((1->3)-beta-glucan endohydrolase) ((1->3)-beta-glucanase) (Beta-1,3-endoglucanase) Length = 351 Score = 28.5 bits (62), Expect = 8.9 Identities = 13/28 (46%), Positives = 20/28 (71%), Gaps = 1/28 (3%) Frame = -2 Query: 463 ENQKDNGV-EQNWGLFYPNMQHVYPISF 383 EN+K+ V E+++GLFYPN Y ++F Sbjct: 319 ENEKNGEVTEKHFGLFYPNRTAKYQLNF 346 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,767,585 Number of Sequences: 219361 Number of extensions: 1280738 Number of successful extensions: 2789 Number of sequences better than 10.0: 24 Number of HSP's better than 10.0 without gapping: 2725 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2789 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 3026354448 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
