ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49f05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL049696.9|HSJ279A18 Human DNA sequence from clone RP1-279A1... 46 0.10
2gb|AY392414.1| Streptomyces clavuligerus plasmid pSCL2 clone con... 42 1.6
3emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS finger... 42 1.6
4emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 42 1.6
5emb|BX640414.1| Bordetella pertussis strain Tohama I, complete g... 42 1.6
6dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, compl... 42 1.6
7gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, ... 40 6.4
8gb|BC019848.1| Homo sapiens chromosome 19 open reading frame 29,... 40 6.4
9emb|CR730941.2|CNS0GQXU Tetraodon nigroviridis full-length cDNA 40 6.4
10emb|CR724329.2|CNS0GLU7 Tetraodon nigroviridis full-length cDNA 40 6.4
11emb|CR722200.2|CNS0GK72 Tetraodon nigroviridis full-length cDNA 40 6.4
12emb|CR711039.2|CNS0GBL7 Tetraodon nigroviridis full-length cDNA 40 6.4
13emb|CR710077.2|CNS0GAUH Tetraodon nigroviridis full-length cDNA 40 6.4
14emb|CR701915.2|CNS0G4JR Tetraodon nigroviridis full-length cDNA 40 6.4
15emb|CR701858.2|CNS0G4I6 Tetraodon nigroviridis full-length cDNA 40 6.4
16emb|CR691751.2|CNS0FWPF Tetraodon nigroviridis full-length cDNA 40 6.4
17emb|CR690031.2|CNS0FVDN Tetraodon nigroviridis full-length cDNA 40 6.4
18emb|CR688896.2|CNS0FUI4 Tetraodon nigroviridis full-length cDNA 40 6.4
19emb|CR687940.2|CNS0FTRK Tetraodon nigroviridis full-length cDNA 40 6.4
20emb|CR684080.2|CNS0FQSC Tetraodon nigroviridis full-length cDNA 40 6.4
21emb|CR682414.2|CNS0FPI2 Tetraodon nigroviridis full-length cDNA 40 6.4
22emb|CR669133.2|CNS0FF9V Tetraodon nigroviridis full-length cDNA 40 6.4
23emb|CR669013.2|CNS0FF6J Tetraodon nigroviridis full-length cDNA 40 6.4
24emb|CR668534.2|CNS0FET8 Tetraodon nigroviridis full-length cDNA 40 6.4
25emb|CR663122.2|CNS0FAMW Tetraodon nigroviridis full-length cDNA 40 6.4
26emb|CR658616.2|CNS0F75Q Tetraodon nigroviridis full-length cDNA 40 6.4
27emb|CR648840.1|CNS0EZM6 Tetraodon nigroviridis full-length cDNA 40 6.4
28emb|CR636890.2|CNS0EQE8 Tetraodon nigroviridis full-length cDNA 40 6.4
29emb|AL034374.2|HS483K16 Human DNA sequence from clone RP3-483K16... 40 6.4
30emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 6.4
31emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.4
32emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.4
33emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete ... 40 6.4
34emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete ... 40 6.4
35dbj|AK097999.1| Homo sapiens cDNA FLJ40680 fis, clone THYMU2022922 40 6.4
36ref|XM_944942.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
37ref|XM_944939.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
38ref|XM_944935.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
39ref|XM_944932.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
40ref|XM_941007.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
41ref|XM_933023.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
42ref|XM_933019.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
43ref|XM_933013.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
44ref|XM_933009.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
45ref|XM_928631.1| PREDICTED: Homo sapiens chromosome 19 open read... 40 6.4
46gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II sectio... 40 6.4
47emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 6.4
48gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 6.4
49gb|AC174764.1| Gasterosteus aculeatus clone VMRC28-119C14, compl... 40 6.4
50gb|AC005175.1|AC005175 Homo sapiens chromosome 19, cosmid R31449... 40 6.4 
>emb|AL049696.9|HSJ279A18 Human DNA sequence from clone RP1-279A18 on chromosome 6q13-15 Contains
             the 3' part of the BCKDHB gene for branched chain keto
             acid dehydrogenase E1, beta polypeptide (maple syrup urine
             disease), complete sequence
          Length = 142707

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 206   agcagcagcaagctgctgatcag 228
             |||||||||||||||||||||||
Sbjct: 89823 agcagcagcaagctgctgatcag 89845
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>gb|AY392414.1| Streptomyces clavuligerus plasmid pSCL2 clone contig4.H9, partial
            sequence
          Length = 5599

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 287  cgggctctggagcggtggcgg 307
            |||||||||||||||||||||
Sbjct: 4715 cgggctctggagcggtggcgg 4695
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>emb|BX927152.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete
              genome; segment 5/10
          Length = 349799

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 319    agaacagctgcacctgctgct 339
              |||||||||||||||||||||
Sbjct: 163284 agaacagctgcacctgctgct 163264
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 133    gctggccgtggaagagctgtggcgc 157
              |||||||||||||| ||||||||||
Sbjct: 318936 gctggccgtggaagggctgtggcgc 318960
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>emb|BX640414.1| Bordetella pertussis strain Tohama I, complete genome; segment 4/12
          Length = 343243

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 133    gctggccgtggaagagctgtggcgc 157
              |||||||||||||| ||||||||||
Sbjct: 183240 gctggccgtggaagggctgtggcgc 183216
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>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome
          Length = 3309401

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 319     agaacagctgcacctgctgct 339
               |||||||||||||||||||||
Sbjct: 1557509 agaacagctgcacctgctgct 1557489
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>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence
          Length = 491611

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    ggcggcggcgtcattggctg 136
              ||||||||||||||||||||
Sbjct: 346431 ggcggcggcgtcattggctg 346412
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>gb|BC019848.1| Homo sapiens chromosome 19 open reading frame 29, mRNA (cDNA clone
           IMAGE:5113225), partial cds
          Length = 1233

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 tcgccctcgccctcaccgtc 280
           ||||||||||||||||||||
Sbjct: 204 tcgccctcgccctcaccgtc 185
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>emb|CR730941.2|CNS0GQXU Tetraodon nigroviridis full-length cDNA
          Length = 1075

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 812 aacacctgcacctgctgcttggac 789
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>emb|CR724329.2|CNS0GLU7 Tetraodon nigroviridis full-length cDNA
          Length = 1052

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 799 aacacctgcacctgctgcttggac 776
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>emb|CR722200.2|CNS0GK72 Tetraodon nigroviridis full-length cDNA
          Length = 1027

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 791 aacacctgcacctgctgcttggac 768
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>emb|CR711039.2|CNS0GBL7 Tetraodon nigroviridis full-length cDNA
          Length = 1058

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 795 aacacctgcacctgctgcttggac 772
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>emb|CR710077.2|CNS0GAUH Tetraodon nigroviridis full-length cDNA
          Length = 1040

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 777 aacacctgcacctgctgcttggac 754
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>emb|CR701915.2|CNS0G4JR Tetraodon nigroviridis full-length cDNA
          Length = 1022

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 768 aacacctgcacctgctgcttggac 745
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>emb|CR701858.2|CNS0G4I6 Tetraodon nigroviridis full-length cDNA
          Length = 1034

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 784 aacacctgcacctgctgcttggac 761
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>emb|CR691751.2|CNS0FWPF Tetraodon nigroviridis full-length cDNA
          Length = 1020

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 784 aacacctgcacctgctgcttggac 761
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>emb|CR690031.2|CNS0FVDN Tetraodon nigroviridis full-length cDNA
          Length = 1004

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 766 aacacctgcacctgctgcttggac 743
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>emb|CR688896.2|CNS0FUI4 Tetraodon nigroviridis full-length cDNA
          Length = 1031

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 782 aacacctgcacctgctgcttggac 759
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>emb|CR687940.2|CNS0FTRK Tetraodon nigroviridis full-length cDNA
          Length = 1061

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 795 aacacctgcacctgctgcttggac 772
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>emb|CR684080.2|CNS0FQSC Tetraodon nigroviridis full-length cDNA
          Length = 1033

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 793 aacacctgcacctgctgcttggac 770
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>emb|CR682414.2|CNS0FPI2 Tetraodon nigroviridis full-length cDNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 790 aacacctgcacctgctgcttggac 767
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>emb|CR669133.2|CNS0FF9V Tetraodon nigroviridis full-length cDNA
          Length = 874

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 620 aacacctgcacctgctgcttggac 597
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>emb|CR669013.2|CNS0FF6J Tetraodon nigroviridis full-length cDNA
          Length = 852

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 803 aacacctgcacctgctgcttggac 780
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>emb|CR668534.2|CNS0FET8 Tetraodon nigroviridis full-length cDNA
          Length = 862

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 813 aacacctgcacctgctgcttggac 790
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>emb|CR663122.2|CNS0FAMW Tetraodon nigroviridis full-length cDNA
          Length = 1008

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 754 aacacctgcacctgctgcttggac 731
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>emb|CR658616.2|CNS0F75Q Tetraodon nigroviridis full-length cDNA
          Length = 1007

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 792 aacacctgcacctgctgcttggac 769
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>emb|CR648840.1|CNS0EZM6 Tetraodon nigroviridis full-length cDNA
          Length = 1028

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 795 aacacctgcacctgctgcttggac 772
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>emb|CR636890.2|CNS0EQE8 Tetraodon nigroviridis full-length cDNA
          Length = 1034

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 321 aacagctgcacctgctgcttggac 344
           |||| |||||||||||||||||||
Sbjct: 779 aacacctgcacctgctgcttggac 756
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>emb|AL034374.2|HS483K16 Human DNA sequence from clone RP3-483K16 on chromosome 6p12.1-21.1
             Contains the gene for homolog of yeast long chain
             polyunsaturated fatty acid elongation enzyme 2 (HELO1), a
             40S Ribosomal protein (RPS16) pseudogene, a 60S Ribosomal
             protein (RPL31) pseudogene and CpG islands, complete
             sequence
          Length = 101270

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 204   gcagcagcagcaagctgctg 223
             ||||||||||||||||||||
Sbjct: 78413 gcagcagcagcaagctgctg 78394
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>emb|CR382122.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome B of strain NRRL Y-1140
               of Kluyveromyces lactis
          Length = 1320834

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 204     gcagcagcagcaagctgctg 223
               ||||||||||||||||||||
Sbjct: 1214250 gcagcagcagcaagctgctg 1214231
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 134   ctggccgtggaagagctgtggcgc 157
             ||||||||||||| ||||||||||
Sbjct: 62262 ctggccgtggaagggctgtggcgc 62285
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>emb|BX572605.1| Rhodopseudomonas palustris CGA009 complete genome; segment 13/16
          Length = 349746

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 117    ggcggcggcgtcattggctg 136
              ||||||||||||||||||||
Sbjct: 180270 ggcggcggcgtcattggctg 180251
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>emb|AL939106.1|SCO939106 Streptomyces coelicolor A3(2) complete genome; segment 3/29
          Length = 314100

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 262    cgccctcgccctcaccgtcg 281
              ||||||||||||||||||||
Sbjct: 197934 cgccctcgccctcaccgtcg 197953
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>emb|AL939105.1|SCO939105 Streptomyces coelicolor A3(2) complete genome; segment 2/29
          Length = 291000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 262    cgccctcgccctcaccgtcg 281
              ||||||||||||||||||||
Sbjct: 236630 cgccctcgccctcaccgtcg 236611
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>dbj|AK097999.1| Homo sapiens cDNA FLJ40680 fis, clone THYMU2022922
          Length = 1914

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1221 tcgccctcgccctcaccgtc 1240
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>ref|XM_944942.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
           transcript variant 10 (C19orf29), mRNA
          Length = 2516

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 tcgccctcgccctcaccgtc 280
           ||||||||||||||||||||
Sbjct: 557 tcgccctcgccctcaccgtc 538
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>ref|XM_944939.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 9 (C19orf29), mRNA
          Length = 3344

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_944935.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 8 (C19orf29), mRNA
          Length = 3613

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_944932.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 7 (C19orf29), mRNA
          Length = 2669

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_941007.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 6 (C19orf29), mRNA
          Length = 2805

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_933023.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
           transcript variant 5 (C19orf29), mRNA
          Length = 2516

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 261 tcgccctcgccctcaccgtc 280
           ||||||||||||||||||||
Sbjct: 557 tcgccctcgccctcaccgtc 538
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>ref|XM_933019.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 4 (C19orf29), mRNA
          Length = 3344

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_933013.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 3 (C19orf29), mRNA
          Length = 3613

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_933009.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 2 (C19orf29), mRNA
          Length = 2669

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>ref|XM_928631.1| PREDICTED: Homo sapiens chromosome 19 open reading frame 29,
            transcript variant 1 (C19orf29), mRNA
          Length = 2805

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 261  tcgccctcgccctcaccgtc 280
            ||||||||||||||||||||
Sbjct: 1654 tcgccctcgccctcaccgtc 1635
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>gb|AC007659.2|AC007659 Arabidopsis thaliana chromosome II section 241 of 255 of the complete
             sequence. Sequence from clones T13E15, T14P1
          Length = 87885

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     aacatacatacttcatcgta 25
             ||||||||||||||||||||
Sbjct: 62101 aacatacatacttcatcgta 62120
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>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 371     tggtggacccccgccggcgaccat 394
               |||||||||| |||||||||||||
Sbjct: 3128314 tggtggacccgcgccggcgaccat 3128337
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 371     tggtggacccccgccggcgaccat 394
               |||||||||| |||||||||||||
Sbjct: 3910374 tggtggacccgcgccggcgaccat 3910397
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>gb|AC174764.1| Gasterosteus aculeatus clone VMRC28-119C14, complete sequence
          Length = 127803

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 204    gcagcagcagcaagctgctg 223
              ||||||||||||||||||||
Sbjct: 108069 gcagcagcagcaagctgctg 108050
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>gb|AC005175.1|AC005175 Homo sapiens chromosome 19, cosmid R31449, complete sequence
          Length = 41303

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 261   tcgccctcgccctcaccgtc 280
             ||||||||||||||||||||
Sbjct: 29583 tcgccctcgccctcaccgtc 29602


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,115,026
Number of Sequences: 3902068
Number of extensions: 4115026
Number of successful extensions: 96823
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 96509
Number of HSP's gapped (non-prelim): 314
length of query: 473
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 451
effective length of database: 17,147,199,772
effective search space: 7733387097172
effective search space used: 7733387097172
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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