Clone Name | rbart49f04 |
---|---|
Clone Library Name | barley_pub |
>gb|AF346003.1|AF346003 Lolium perenne malate dehydrogenase mRNA, partial cds Length = 587 Score = 309 bits (156), Expect = 4e-81 Identities = 225/248 (90%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 ||||| ||||| || || |||||||||||||| ||||||||||| || |||||||||||| Sbjct: 344 aggcacgagtaggcgagagccttctcctccgagagctcctgggctgtggcatccatcttc 285 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 || || |||||||| || |||||||||||||||||||||||||| |||||||||| ||| Sbjct: 284 tttcttgagaactcgtcgatcgggagcccttgaacaattgtccattcaccaccgcagcaa 225 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||||||||||||||||||||| |||||||| ||||||||||||||||| || || ||| Sbjct: 224 gttactgggaaggagtagataagcccagcaggcacaccgtatgaaccatcagaatacaca 165 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 |||||||||||||||||||||||||||||||| |||||||| ||||||||||| |||||| Sbjct: 164 cccatggaaacaaatgttccctcaggggttccgagaacccaatcacggatgtggtcacaa 105 Query: 429 gctgagct 436 || ||||| Sbjct: 104 gcagagct 97 Score = 44.1 bits (22), Expect = 0.38 Identities = 22/22 (100%) Strand = Plus / Minus Query: 136 cttttattcaaaacatcagagc 157 |||||||||||||||||||||| Sbjct: 396 cttttattcaaaacatcagagc 375
>gb|BT016453.1| Zea mays clone Contig286 mRNA sequence Length = 1354 Score = 272 bits (137), Expect = 9e-70 Identities = 227/257 (88%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 239 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 1087 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1028 Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 1027 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 968 Query: 300 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 359 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 967 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 908 Query: 360 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 419 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 907 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 848 Query: 420 tgatcacaagctgagct 436 || |||||||| ||||| Sbjct: 847 tggtcacaagcagagct 831
>gb|AF379609.1|AF379609 Zea mays malate dehydrogenase mRNA, partial cds Length = 529 Score = 272 bits (137), Expect = 9e-70 Identities = 227/257 (88%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 239 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 335 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 276 Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 275 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 216 Query: 300 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 359 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 215 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 156 Query: 360 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 419 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 155 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 96 Query: 420 tgatcacaagctgagct 436 || |||||||| ||||| Sbjct: 95 tggtcacaagcagagct 79
>gb|AY109362.1| Zea mays CL1892_2 mRNA sequence Length = 943 Score = 272 bits (137), Expect = 9e-70 Identities = 227/257 (88%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 239 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 916 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 857 Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 856 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 797 Query: 300 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 359 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 796 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 737 Query: 360 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 419 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 736 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 677 Query: 420 tgatcacaagctgagct 436 || |||||||| ||||| Sbjct: 676 tggtcacaagcagagct 660
>gb|AF007581.1|AF007581 Zea mays cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1275 Score = 272 bits (137), Expect = 9e-70 Identities = 227/257 (88%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgca 239 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| || ||| Sbjct: 1078 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggcagtggca 1019 Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||||||||||||| |||||||||||||||||||| |||||||| ||| |||| |||||| Sbjct: 1018 tccatcttcttccttgagaactcatcaatcgggaggccttgaacgattttccattcacca 959 Query: 300 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 359 || ||||| ||||||||||| || || || || |||| ||| ||||||||||||||||| Sbjct: 958 ccactgcatgttactgggaatgaataaatgagtccagaaggaacaccgtatgaaccatca 899 Query: 360 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 419 ||||| |||||||||||||||||||| |||||||| ||||| |||||||| ||||| ||| Sbjct: 898 gagtacacacccatggaaacaaatgtaccctcaggtgttccaagaacccaatcacgaatg 839 Query: 420 tgatcacaagctgagct 436 || |||||||| ||||| Sbjct: 838 tggtcacaagcagagct 822
>ref|NM_197014.1| Oryza sativa (japonica cultivar-group) cytoplasmic malate dehydrogenase (OSJNBa0055P24.3), mRNA Length = 1381 Score = 262 bits (132), Expect = 9e-67 Identities = 210/236 (88%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1090 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1031 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1030 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 971 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 970 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 911 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatc 424 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 910 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatc 855
>dbj|AK066396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013064D20, full insert sequence Length = 1392 Score = 262 bits (132), Expect = 9e-67 Identities = 210/236 (88%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1101 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1042 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1041 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 982 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 981 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 922 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatc 424 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 921 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatc 866
>dbj|AK104691.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-G07, full insert sequence Length = 1326 Score = 254 bits (128), Expect = 2e-64 Identities = 209/236 (88%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1096 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1037 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1036 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 977 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||||||||| |||||||| ||||||||||| ||||| || || ||||| ||||| ||| Sbjct: 976 gttactgggaacgagtagatcagaccagcaggcacaccatacgagccatcagagtacaca 917 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatc 424 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 916 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatc 861
>gb|AF353203.1| Oryza sativa cytoplasmic malate dehydrogenase mRNA, complete cds Length = 1371 Score = 254 bits (128), Expect = 2e-64 Identities = 209/236 (88%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 1081 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 1022 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 1021 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 962 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||| ||||| |||||||| ||||||||||| ||||| || |||||||| ||||| ||| Sbjct: 961 gttaccgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagtacaca 902 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatc 424 |||||||| ||||||||||||||||| || || |||||||||||||| |||||||| Sbjct: 901 cccatggagacaaatgttccctcaggagtgccaagaacccagtcacgaatgtgatc 846
>gb|DQ083217.1| Oryza sativa (indica cultivar-group) clone 8S3C18 mRNA sequence Length = 360 Score = 188 bits (95), Expect = 1e-44 Identities = 155/175 (88%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 175 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 116 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 ||||| |||||||| || |||||||| || |||||||| ||||| || ||||| ||||| Sbjct: 115 ttccttgagaactcgtcgatcgggagaccctgaacaatcgtccattcgccaccactgcat 56 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagt 363 ||||||||||| |||||||| ||||||||||| ||||| || |||||||| |||| Sbjct: 55 gttactgggaacgagtagatcagaccagcaggcacaccatacgaaccatcagagt 1
>ref|NM_123699.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT5G43330 mRNA, complete cds Length = 1308 Score = 127 bits (64), Expect = 3e-26 Identities = 202/248 (81%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1111 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1052 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1051 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 992 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 991 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 932 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 931 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 872 Query: 429 gctgagct 436 |||||||| Sbjct: 871 gctgagct 864
>gb|AY091220.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1030 Score = 127 bits (64), Expect = 3e-26 Identities = 202/248 (81%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 992 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 933 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 932 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 873 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 872 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 813 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 812 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 753 Query: 429 gctgagct 436 |||||||| Sbjct: 752 gctgagct 745
>gb|AY072137.1| Arabidopsis thaliana putative cytosolic malate dehydrogenase (At5g43330) mRNA, complete cds Length = 1198 Score = 127 bits (64), Expect = 3e-26 Identities = 202/248 (81%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 ||||| ||||||||||| |||||||| ||||| | |||||| |||||||| || |||||| Sbjct: 885 cccattgaaacaaatgtgccctcaggtgttccaacaacccaatcacggatatggtcacaa 826 Query: 429 gctgagct 436 |||||||| Sbjct: 825 gctgagct 818
>gb|DQ225182.1| Lycopersicon chilense malate dehydrogenase mRNA, complete cds Length = 1005 Score = 119 bits (60), Expect = 8e-24 Identities = 198/244 (81%) Strand = Plus / Minus Query: 187 caaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatct 246 ||||||| |||||||||| || || ||||| || || |||| ||| ||| |||| || Sbjct: 1000 caaggcaggagtaagccaatgctttttcctctgatagttcctcggctgtcaagtccaact 941 Query: 247 tcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgc 306 |||| || |||||||| ||||| || || ||||||||||| | ||| || ||| ||| Sbjct: 940 tctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgc 881 Query: 307 acgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaa 366 | || ||||||||||| || ||||| |||| |||||| |||||| ||||| ||||||| Sbjct: 880 atgtaactgggaaggaataaataagcccagatgggacattgtatgacccatcagagtaaa 821 Query: 367 cacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcac 426 ||||||| |||||||| |||||||| || ||||| || ||||||||||| |||||||||| Sbjct: 820 cacccatagaaacaaaagttccctctggagttccaaggacccagtcacgaatgtgatcac 761 Query: 427 aagc 430 |||| Sbjct: 760 aagc 757
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 279 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 338 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 17402292 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17402233 Query: 339 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 390 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 17402232 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17402181 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 17402508 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17402449 Query: 249 ttcctcgagaactcatcaatcgggag 274 ||||| |||||||| || |||||||| Sbjct: 17402448 ttccttgagaactcgtcgatcgggag 17402423 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 388 cctcaggggttcccagaacccagtcacggatgtgatc 424 ||||||| || || |||||||||||||| |||||||| Sbjct: 17402074 cctcaggagtgccaagaacccagtcacgaatgtgatc 17402038
>gb|AC037425.7|AC037425 Oryza sativa chromosome 10 BAC OSJNBa0055P24 genomic sequence, complete sequence Length = 134058 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 279 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 338 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 31287 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 31228 Query: 339 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 390 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 31227 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 31176 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 31503 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 31444 Query: 249 ttcctcgagaactcatcaatcgggag 274 ||||| |||||||| || |||||||| Sbjct: 31443 ttccttgagaactcgtcgatcgggag 31418 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 388 cctcaggggttcccagaacccagtcacggatgtgatc 424 ||||||| || || |||||||||||||| |||||||| Sbjct: 31069 cctcaggagtgccaagaacccagtcacgaatgtgatc 31033
>gb|AY087986.1| Arabidopsis thaliana clone 40174 mRNA, complete sequence Length = 1239 Score = 119 bits (60), Expect = 8e-24 Identities = 201/248 (81%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 1065 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 1006 Query: 249 ttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgcac 308 |||||||| ||||||||||| | ||||||||||| ||||| || ||| | ||| Sbjct: 1005 ttcctcgatgcgtcatcaatcggtaaaccttgaacaatggtccactctccattacggcag 946 Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||| ||||||||||||||||| ||||| || ||| ||| || ||||| ||||| || Sbjct: 945 gttacggggaaggagtagataagtccagctggaacattgtaggatccatctgagtatact 886 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 ||||| ||||||||||| ||||| || ||||| | |||||| |||||||| || |||||| Sbjct: 885 cccattgaaacaaatgtgccctcgggtgttccaacaacccaatcacggatatggtcacaa 826 Query: 429 gctgagct 436 |||||||| Sbjct: 825 gctgagct 818
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 119 bits (60), Expect = 8e-24 Identities = 99/112 (88%) Strand = Plus / Minus Query: 279 tgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagaccagca 338 |||||||| ||||| || ||||| ||||| ||||||||||| |||||||| ||||||||| Sbjct: 17411332 tgaacaatcgtccattcgccaccactgcatgttactgggaacgagtagatcagaccagca 17411273 Query: 339 gggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 390 || ||||| || |||||||| ||||| ||||||||||| ||||||||||||| Sbjct: 17411272 ggcacaccatacgaaccatcagagtacacacccatggagacaaatgttccct 17411221 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| |||| |||||||||||||||||||||||| ||||| ||||||||| Sbjct: 17411548 aggcatgagtaagcgagcgtcttctcctccgacagctcctgggcagtcgcgtccatcttc 17411489 Query: 249 ttcctcgagaactcatcaatcgggag 274 ||||| |||||||| || |||||||| Sbjct: 17411488 ttccttgagaactcgtcgatcgggag 17411463 Score = 42.1 bits (21), Expect = 1.5 Identities = 33/37 (89%) Strand = Plus / Minus Query: 388 cctcaggggttcccagaacccagtcacggatgtgatc 424 ||||||| || || |||||||||||||| |||||||| Sbjct: 17411114 cctcaggagtgccaagaacccagtcacgaatgtgatc 17411078
>gb|DQ294258.1| Solanum tuberosum clone 093D06 malate dehydrogenase-like protein mRNA, complete cds Length = 1220 Score = 103 bits (52), Expect = 5e-19 Identities = 100/116 (86%) Strand = Plus / Minus Query: 315 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 374 |||||||| || ||||| ||||| |||||| |||||| ||||| |||||||||||||| Sbjct: 902 gggaaggaataaataagcccagctgggacattgtatgacccatcagagtaaacacccata 843 Query: 375 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagc 430 |||||||| || ||||| || ||||| || ||||||||||| |||||||||||||| Sbjct: 842 gaaacaaaagtgccctctggagttccaaggacccagtcacgaatgtgatcacaagc 787
>emb|AM040268.1| Capsicum chinense partial mRNA for cytosolic malate dehydrogenase (mdh gene) Length = 773 Score = 101 bits (51), Expect = 2e-18 Identities = 195/243 (80%) Strand = Plus / Minus Query: 188 aaggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatctt 247 |||||| |||||||||| || || |||||||| ||||||| || ||| |||| ||| Sbjct: 546 aaggcaggagtaagccaatgctttttcctccgatagctcctcagctgtcaagtccaactt 487 Query: 248 cttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcaccaccgctgca 307 ||| || |||||||| ||||| || || ||||||||||| | ||| || ||| |||| Sbjct: 486 ctttcttgagaactcgtcaattggaagaccttgaacaatggaccattctccatttttgca 427 Query: 308 cgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaac 367 || ||||||||||| || || || ||||| |||||| |||||| ||||| |||||||| Sbjct: 426 tgtaactgggaaggaataaatgagcccagctgggacattgtatgacccatcagagtaaac 367 Query: 368 acccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcaca 427 |||||| |||||||| || ||||| || ||||| || ||||| || || ||||||||||| Sbjct: 366 acccatagaaacaaaagtaccctctggagttccaaggacccaatcgcgaatgtgatcaca 307 Query: 428 agc 430 ||| Sbjct: 306 agc 304
>emb|AJ299256.1|NTA299256 Nicotiana tabacum mRNA for malate dehydrogenase (md1 gene) Length = 1328 Score = 101 bits (51), Expect = 2e-18 Identities = 156/191 (81%) Strand = Plus / Minus Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||| |||||| || |||||||||||||| || || ||||||||||| | ||| || ||| Sbjct: 996 tccaacttctttcttgagaactcatcaattggaagaccttgaacaatagaccattctcca 937 Query: 300 ccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatcc 359 |||| | ||||||||||| || ||||| ||||| |||||| |||||| ||||| Sbjct: 936 tttttgcatgcaactgggaaggaataaataagcccagctgggacattgtatgacccatca 877 Query: 360 gagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatg 419 |||||||||||||| ||||| | |||||||| || ||||| || ||||| ||||| ||| Sbjct: 876 gagtaaacacccatagaaacccaagttccctctggagttccaaggacccaatcacgtatg 817 Query: 420 tgatcacaagc 430 ||||||||||| Sbjct: 816 tgatcacaagc 806
>gb|AF367442.1| Prunus persica clone Mdh1 NAD-dependent malate dehydrogenase (mdh1) mRNA, complete cds Length = 1491 Score = 99.6 bits (50), Expect = 7e-18 Identities = 167/206 (81%) Strand = Plus / Minus Query: 231 gcggtcgcatccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtc 290 ||||| || |||| ||||||||| ||||| || ||||| | ||||||||||||||| || Sbjct: 950 gcggttgcgtccaacttcttcctagagaattcgtcaatagagagcccttgaacaatcttc 891 Query: 291 caatcaccaccgctgcacgttactgggaaggagtagataagaccagcagggacaccgtat 350 || || ||| ||| || |||||||| ||||| || ||||||| ||| ||| |||| Sbjct: 890 cactccccattttggcaagtgactgggaatgagtaaatgagaccagaaggaacattgtat 831 Query: 351 gaaccatccgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccag 410 || ||||| ||||| |||||||||||||| | || ||||| |||||||| || ||||| Sbjct: 830 gagccatcagagtacacacccatggaaacccaggtgccctcgggggttccaagtacccaa 771 Query: 411 tcacggatgtgatcacaagctgagct 436 ||||| |||||||||||||| ||||| Sbjct: 770 tcacgaatgtgatcacaagcagagct 745
>ref|NM_100321.2| Arabidopsis thaliana malate dehydrogenase/ oxidoreductase AT1G04410 mRNA, complete cds Length = 1484 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1087 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1028 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 1027 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 968 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 967 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 908 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 907 gtggtcacaagcagagct 890
>gb|AY133655.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 999 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 762 gtggtcacaagcagagct 745
>gb|AY081563.1| Arabidopsis thaliana unknown protein (At1g04410) mRNA, complete cds Length = 1223 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 942 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 883 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 882 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 823 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 822 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 763 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 762 gtggtcacaagcagagct 745
>gb|AY065134.1| Arabidopsis thaliana unknown protein (At1g04410; F19P19.13) mRNA, complete cds Length = 1314 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1028 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 969 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 968 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 909 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 908 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 849 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 848 gtggtcacaagcagagct 831
>gb|AY050374.1| Arabidopsis thaliana At1g04410/F19P19_13 mRNA, complete cds Length = 1309 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1024 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 965 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 964 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 905 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 904 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 845 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 844 gtggtcacaagcagagct 827
>emb|BX815185.1|CNS0ACZH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS3ZH07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 541 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 252 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccactctcc 193 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 192 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 133 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 132 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 73 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 72 gtggtcacaagcagagct 55
>emb|BX815710.1|CNS0ACSG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS87ZA02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 600 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 317 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 258 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 257 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 198 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 197 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 138 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 137 gtggtcacaagcagagct 120
>gb|AY088023.1| Arabidopsis thaliana clone 40467 mRNA, complete sequence Length = 1351 Score = 91.7 bits (46), Expect = 2e-15 Identities = 160/198 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||||||||||||| || | ||||||||||| || ||||| ||||| |||| || || Sbjct: 1064 atccatcttcttccttgatacttcatcaatcggaaggccttggacaatactccagtctcc 1005 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | || || ||||| ||||||||||||||||| || | || || | ||| || ||||| Sbjct: 1004 attgcgacaagttacagggaaggagtagataagtcctgatggaacgctgtaagagccatc 945 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| || ||||||||||| || || ||||| || ||||| || |||||||||||||| Sbjct: 944 ggagtatactcccatggaaacgaacgtaccctctggagttccaaggacccagtcacggat 885 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 884 gtggtcacaagcagagct 867
>emb|AJ299059.1|CAR299059 Cicer arietinum mRNA for cytosolic malate dehydrogenase (ORF1), clone CanCMDH Length = 1399 Score = 87.7 bits (44), Expect = 3e-14 Identities = 155/192 (80%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||| ||||||||| ||||||||||| |||| || |||||||||||| |||| || || Sbjct: 1008 atccaacttcttccttgagaactcatcgatcgaaagtccttgaacaattttccattcccc 949 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 |||| || || || ||||| || ||||| || ||||| || ||| ||||||||| || Sbjct: 948 accggcacaggtaacagggaatgaatagatcagtccagcgggtacattgtatgaaccgtc 889 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 || || || ||||| |||||||| || |||||||| ||||| |||||||| || || || Sbjct: 888 agaatacactcccattgaaacaaaggtgccctcaggagttccaagaacccaatcgcgaat 829 Query: 419 gtgatcacaagc 430 ||| |||||||| Sbjct: 828 gtggtcacaagc 817
>emb|AJ251083.1|BVU251083 Beta vulgaris mRNA for putative malate dehydrogenase (nr1 gene) Length = 999 Score = 87.7 bits (44), Expect = 3e-14 Identities = 98/116 (84%) Strand = Plus / Minus Query: 315 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 374 |||||||||||||||| ||||| || || |||||| ||||| ||||| |||||||| Sbjct: 866 gggaaggagtagataattccagctggtacgttgtatgagccatcagagtacacacccata 807 Query: 375 gaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaagc 430 ||||| | |||||||| |||||||| || ||||| |||||||||||||||||||| Sbjct: 806 gaaacccaagttccctctggggttccaagcacccaatcacggatgtgatcacaagc 751
>emb|X96539.1|MCMDH M.crystallinum mRNA for malate dehydrogenase Length = 1273 Score = 67.9 bits (34), Expect = 3e-08 Identities = 100/122 (81%) Strand = Plus / Minus Query: 309 gttactgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaaca 368 ||||||||||||||||| || | ||||| || ||| ||| || ||||| || || ||| Sbjct: 958 gttactgggaaggagtaaatgattccagctggcacattgtacgagccatcagaatacaca 899 Query: 369 cccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatcacaa 428 ||||| || || |||||||||| |||||||| || ||||| ||| |||||||||||||| Sbjct: 898 cccatagatacccatgttccctctggggttccaagcacccaatcatggatgtgatcacaa 839 Query: 429 gc 430 || Sbjct: 838 gc 837
>emb|AJ843126.1| Plantago major mRNA for malate dehydrogenase (mdh1 gene) Length = 1353 Score = 67.9 bits (34), Expect = 3e-08 Identities = 157/198 (79%) Strand = Plus / Minus Query: 239 atccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacc 298 ||||| ||| ||||| |||||||||||||| || || ||||||||||| | ||| || || Sbjct: 1005 atccaactttttccttgagaactcatcaatgggaagtccttgaacaatcgaccattctcc 946 Query: 299 accgctgcacgttactgggaaggagtagataagaccagcagggacaccgtatgaaccatc 358 | |||| || |||||||| ||||| || | ||||| || ||| ||| || ||||| Sbjct: 945 attcttgcaagtcactgggaatgagtaaattaatccagctggtacattgtacgagccatc 886 Query: 359 cgagtaaacacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggat 418 ||||| |||||||||||||| | || ||||| || ||||||| ||||| ||||| || Sbjct: 885 agagtatacacccatggaaacccaggtaccctctggagttcccaagacccaatcacgaat 826 Query: 419 gtgatcacaagctgagct 436 ||| |||||||| ||||| Sbjct: 825 gtggtcacaagcagagct 808
>gb|DQ167567.1| Zea mays clone MCI21 mRNA sequence Length = 282 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaagccagcgccttctcctccgacagctcctgggc 232 |||||||| |||||||||||||| |||| ||||||||||| |||||| ||||| Sbjct: 60 atttactcgaggcatgagtaagcaagcgtcttctcctccgtcagctcttgggc 8
>dbj|AB025638.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MWF20 Length = 91193 Score = 61.9 bits (31), Expect = 2e-06 Identities = 94/115 (81%) Strand = Plus / Minus Query: 276 ccttgaacaattgtccaatcaccaccgctgcacgttactgggaaggagtagataagacca 335 ||||||||||| ||||| || ||| | ||| ||||| ||||||||||||||||| ||| Sbjct: 7264 ccttgaacaatggtccactctccattacggcaggttacggggaaggagtagataagtcca 7205 Query: 336 gcagggacaccgtatgaaccatccgagtaaacacccatggaaacaaatgttccct 390 || || ||| ||| || ||||| ||||| || ||||| ||||||||||| |||| Sbjct: 7204 gctggaacattgtaggatccatctgagtatactcccattgaaacaaatgtgccct 7150 Score = 50.1 bits (25), Expect = 0.006 Identities = 43/49 (87%) Strand = Plus / Minus Query: 388 cctcaggggttcccagaacccagtcacggatgtgatcacaagctgagct 436 ||||||| ||||| | |||||| |||||||| || |||||||||||||| Sbjct: 7064 cctcaggtgttccaacaacccaatcacggatatggtcacaagctgagct 7016 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctccgacagctcctgggcggtcgcatccatcttc 248 |||||||||||||| || ||||||| ||| || ||||| || ||| |||||||||| Sbjct: 7544 aggcatgagtaagcgaggtccttctcttccttcaactcctctgctgtcaaatccatcttc 7485 Query: 249 ttcctcga 256 |||||||| Sbjct: 7484 ttcctcga 7477
>gb|AY236152.1| Triticum aestivum cytosolic malate dehydrogenase mRNA, partial cds Length = 683 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 411 tcacggatgtgatcacaagctgagct 436 |||||||||||||||||||||||||| Sbjct: 683 tcacggatgtgatcacaagctgagct 658
>gb|AY057442.1| Arabidopsis thaliana ecotype Ler cryptochrome 2 (CRY2) gene, complete cds Length = 4649 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 396 gttcccagaacccagtcacggatgtgatcacaagctgagct 436 ||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 353 gttccaaggacccagtcacggatgtggtcacaagcagagct 313
>gb|AY057441.1| Arabidopsis thaliana ecotype Cvi cryptochrome 2 (CRY2) gene, complete cds Length = 4659 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 396 gttcccagaacccagtcacggatgtgatcacaagctgagct 436 ||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 360 gttccaaggacccagtcacggatgtggtcacaagcagagct 320
>emb|BX841818.1|CNS09Y6C Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS38ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1075 Score = 50.1 bits (25), Expect = 0.006 Identities = 92/113 (81%), Gaps = 1/113 (0%) Strand = Plus / Minus Query: 315 gggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacacccatg 374 ||||||||||||||||| || | || || | ||| || ||||| ||||| || |||||| Sbjct: 939 gggaaggagtagataagtcctgatggaacgctgtaagagccatcggagtatactcccatg 880 Query: 375 gaaacaaatgttccctcaggggttccca-gaacccagtcacggatgtgatcac 426 ||||| || || ||||| || ||||| | || |||||||||||||||| |||| Sbjct: 879 gaaacgaacgtaccctctggagttccaaggaccccagtcacggatgtggtcac 827
>gb|AC000104.1|F19P19 Sequence of BAC F19P19 from Arabidopsis thaliana chromosome 1, complete sequence Length = 107527 Score = 50.1 bits (25), Expect = 0.006 Identities = 37/41 (90%) Strand = Plus / Minus Query: 396 gttcccagaacccagtcacggatgtgatcacaagctgagct 436 ||||| || ||||||||||||||||| |||||||| ||||| Sbjct: 43392 gttccaaggacccagtcacggatgtggtcacaagcagagct 43352
>gb|AC121571.4| Mus musculus BAC clone RP23-231J6 from 3, complete sequence Length = 195006 Score = 48.1 bits (24), Expect = 0.024 Identities = 24/24 (100%) Strand = Plus / Minus Query: 132 gtttcttttattcaaaacatcaga 155 |||||||||||||||||||||||| Sbjct: 131186 gtttcttttattcaaaacatcaga 131163
>gb|AF020272.1|AF020272 Medicago sativa cytosolic malate dehydrogenase (cmdh) mRNA, complete cds Length = 1397 Score = 48.1 bits (24), Expect = 0.024 Identities = 51/60 (85%) Strand = Plus / Minus Query: 240 tccatcttcttcctcgagaactcatcaatcgggagcccttgaacaattgtccaatcacca 299 |||| ||||||||| |||||||||||||| | || |||||||| ||| |||| |||||| Sbjct: 1002 tccaacttcttccttgagaactcatcaattgaaagtccttgaactattttccattcacca 943
>gb|AY485993.1| Pinus pinaster malate dehydrogenase (mdh) mRNA, complete cds Length = 1413 Score = 46.1 bits (23), Expect = 0.095 Identities = 50/59 (84%) Strand = Plus / Minus Query: 366 acacccatggaaacaaatgttccctcaggggttcccagaacccagtcacggatgtgatc 424 |||||||| ||||||||||| |||| ||| || || || ||||| |||||||| ||||| Sbjct: 831 acacccattgaaacaaatgtacccttaggtgtaccaagcacccaatcacggatatgatc 773
>gb|AY433086.1| Aedes aegypti ASAP ID: 35357 unknown mRNA sequence Length = 482 Score = 44.1 bits (22), Expect = 0.38 Identities = 25/26 (96%) Strand = Plus / Plus Query: 9 cttccagcaaatgttcaggtaaaagg 34 ||||||||||||||||||| |||||| Sbjct: 156 cttccagcaaatgttcaggaaaaagg 181
>gb|AC112682.12| Mus musculus chromosome 6, clone RP23-332K10, complete sequence Length = 206903 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 151 tcagagcatcaactgctcttc 171 ||||||||||||||||||||| Sbjct: 126558 tcagagcatcaactgctcttc 126538
>gb|AY496910.1| Glycine max cytosolic malate dehydrogenase mRNA, complete cds Length = 1312 Score = 42.1 bits (21), Expect = 1.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 189 aggcatgagtaagccagcgccttctcctc 217 |||||||||||||||| ||||||||||| Sbjct: 1044 aggcatgagtaagccaatgccttctcctc 1016
>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete sequence Length = 635328 Score = 42.1 bits (21), Expect = 1.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 atttactcaaggcatgagtaa 200 ||||||||||||||||||||| Sbjct: 505077 atttactcaaggcatgagtaa 505057
>ref|XM_636241.1| Dictyostelium discoideum malate dehydrogenase (DDB0230187), partial mRNA Length = 1002 Score = 40.1 bits (20), Expect = 5.9 Identities = 56/68 (82%) Strand = Plus / Minus Query: 312 actgggaaggagtagataagaccagcagggacaccgtatgaaccatccgagtaaacaccc 371 |||||||| || |||||||||| | || ||||| || |||||||| || ||||||||| Sbjct: 869 actgggaaagaaaagataagaccttctggaacaccataggaaccatcggaataaacaccc 810 Query: 372 atggaaac 379 || ||||| Sbjct: 809 attgaaac 802
>gb|AE008571.1| Rickettsia conorii str. Malish 7, section 3 of 114 of the complete genome Length = 11078 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 caaatgttccctcaggggtt 398 |||||||||||||||||||| Sbjct: 1031 caaatgttccctcaggggtt 1012
>gb|BC053105.1| Mus musculus phosphorylase kinase beta, mRNA (cDNA clone MGC:62514 IMAGE:6409425), complete cds Length = 4640 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 728 aggtttcttttattcaaaac 747
>ref|NM_199446.1| Mus musculus phosphorylase kinase beta (Phkb), mRNA Length = 4640 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 728 aggtttcttttattcaaaac 747
>gb|BC068420.1| Danio rerio wu:fj56a04, mRNA (cDNA clone IMAGE:6970634), partial cds Length = 3309 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 gcgccttctcctccgacagctcct 228 |||||||||||||||||| ||||| Sbjct: 2876 gcgccttctcctccgacacctcct 2899
>gb|AC122830.4| Mus musculus BAC clone RP23-224I23 from 8, complete sequence Length = 257003 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 123832 aggtttcttttattcaaaac 123851
>gb|AC117185.2| Mus musculus BAC clone RP23-37M7 from 8, complete sequence Length = 188791 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 164232 aggtttcttttattcaaaac 164251
>emb|AL445195.4| Human DNA sequence from clone RP11-427O13 on chromosome 13 Contains 2 NADH dehydrogenase pseudogenes and a novel gene, complete sequence Length = 172064 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaacatca 153 |||||||||||||| ||||||||| Sbjct: 166793 aggtttcttttattaaaaacatca 166816
>gb|AC079243.7| Mus musculus strain C57BL6/J chromosome 6 clone RP23-64M7, complete sequence Length = 205508 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 gtgcagctgttctgggtgga 110 |||||||||||||||||||| Sbjct: 41094 gtgcagctgttctgggtgga 41113
>gb|AC055713.29| Homo sapiens 12 BAC RP11-486O12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 118312 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 caaatgttccctcaggggtt 398 |||||||||||||||||||| Sbjct: 2673 caaatgttccctcaggggtt 2654
>dbj|AK131442.1| Homo sapiens cDNA FLJ16577 fis, clone TESTI2026647, weakly similar to PROBABLE ATP-DEPENDENT RNA HELICASE DDX10 Length = 1848 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 379 caaatgttccctcaggggtt 398 |||||||||||||||||||| Sbjct: 8 caaatgttccctcaggggtt 27
>gb|AC157099.5| Mus musculus 6 BAC RP24-467O4 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 173237 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 375 gaaacaaatgttccctcagg 394 |||||||||||||||||||| Sbjct: 63391 gaaacaaatgttccctcagg 63410
>gb|AC092445.4| Homo sapiens BAC clone RP11-676H8 from 4, complete sequence Length = 173840 Score = 40.1 bits (20), Expect = 5.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 129 aaggtttcttttattcaaaacatc 152 ||||||||||||||| |||||||| Sbjct: 120506 aaggtttcttttattgaaaacatc 120483
>dbj|AK165815.1| Mus musculus 13 days embryo brain cDNA, RIKEN full-length enriched library, clone:G630093B19 product:phosphorylase kinase beta, full insert sequence Length = 1015 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 723 aggtttcttttattcaaaac 742
>dbj|AK089493.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730039M10 product:similar to phosphorylase kinase (EC 2.7.1.38) beta chain [Homo sapiens], full insert sequence Length = 1972 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggtttcttttattcaaaac 149 |||||||||||||||||||| Sbjct: 766 aggtttcttttattcaaaac 785
>gb|AC048340.24| Homo sapiens 12 BAC RP11-469A24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 76354 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 379 caaatgttccctcaggggtt 398 |||||||||||||||||||| Sbjct: 8342 caaatgttccctcaggggtt 8323
>gb|AC159712.7| Mus musculus BAC RP23-236J3 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 221910 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 375 gaaacaaatgttccctcagg 394 |||||||||||||||||||| Sbjct: 10006 gaaacaaatgttccctcagg 9987
>gb|AC158188.2| Selaginella moellendorffii clone JGIASXY-5I4, complete sequence Length = 37581 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 tcgcatccatcttcttcctc 254 |||||||||||||||||||| Sbjct: 6104 tcgcatccatcttcttcctc 6123
>dbj|AB115700.1| Cryptococcus diffluens DNA, intergenic spacer 1 region Length = 603 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 292 aatcaccaccgctgcacgtt 311 |||||||||||||||||||| Sbjct: 461 aatcaccaccgctgcacgtt 442
>gb|M74695.1|HIVGP120K Human immunodeficiency virus type 1 env gene, partial cds (a11) Length = 396 Score = 40.1 bits (20), Expect = 5.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 ttattcaaaacatcagagca 158 |||||||||||||||||||| Sbjct: 206 ttattcaaaacatcagagca 187 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,917,624 Number of Sequences: 3902068 Number of extensions: 3917624 Number of successful extensions: 115401 Number of sequences better than 10.0: 68 Number of HSP's better than 10.0 without gapping: 67 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 115202 Number of HSP's gapped (non-prelim): 165 length of query: 436 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 414 effective length of database: 17,147,199,772 effective search space: 7098940705608 effective search space used: 7098940705608 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)