Clone Name | rbart49e02 |
---|---|
Clone Library Name | barley_pub |
>DUFFY_MOUSE (Q9QUI6) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 334 Score = 33.5 bits (75), Expect = 0.41 Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 1/57 (1%) Frame = -2 Query: 526 RTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAHLTEP 359 R+ +L++TC++ ++ M TE+ ++ + VATPLLLA H + R+L+ L+ P Sbjct: 265 RSKTVLLYTCQSQKILDAMLNVTEALSMLHCVATPLLLALFCH-QTTRRSLSSLSLP 320
>DUFFY_MACMU (Q95LF2) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 335 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A + L+ E+ A+ + VATPLLLA H T Sbjct: 259 LGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALF----CHQATRTL 314 Query: 370 LTEPPLP 350 L PLP Sbjct: 315 LPSLPLP 321
>DUFFY_PAPHA (Q95LG5) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A + L+ E+ A+ + VATPLLLA H T Sbjct: 260 LGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALF----CHQATRTL 315 Query: 370 LTEPPLP 350 L PLP Sbjct: 316 LPSLPLP 322
>DUFFY_HUMAN (Q16570) Duffy antigen/chemokine receptor (Fy glycoprotein) (GpFy)| (Glycoprotein D) (Plasmodium vivax receptor) (CD234 antigen) Length = 336 Score = 31.6 bits (70), Expect = 1.5 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A + L+ E+ A+ + VATPLLLA H T Sbjct: 260 LGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLLLALF----CHQATRTL 315 Query: 370 LTEPPLP 350 L PLP Sbjct: 316 LPSLPLP 322
>DUFFY_PANTR (Q95LF3) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 31.2 bits (69), Expect = 2.0 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A + L+ E+ A+ + VATPLLLA H T Sbjct: 260 LGLDFLVRSKLLLLSTCLARQALDLLLNLAEALAILHCVATPLLLALF----CHQATRTL 315 Query: 370 LTEPPLP 350 L PLP Sbjct: 316 LPSLPLP 322
>TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF-interacting| protein) Length = 3038 Score = 30.8 bits (68), Expect = 2.6 Identities = 17/65 (26%), Positives = 30/65 (46%), Gaps = 3/65 (4%) Frame = +3 Query: 57 SPDSLSISLNIA*KASKLLTIIPSRKQHDNITMPVWKKRKRTVHKPTKTCKSKLEGS--- 227 S DSL+ S N + +L +I H +W+ RK +H+ + C + E Sbjct: 461 SSDSLTASANYSKAVHHVLDVIHEVLHHQRHVRTIWQHRKVRLHQRLQLCVFQQEVQQVL 520 Query: 228 EWLQN 242 +W++N Sbjct: 521 DWIEN 525
>DUFFY_SAGIM (Q95LF7) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 30.8 bits (68), Expect = 2.6 Identities = 27/67 (40%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A V+ L+ E+ A+ + VATPLLLA H RTL Sbjct: 260 LGLDFLVRSKLLLLPTCLAQQVLDLLLNLAEALAIVHCVATPLLLALFCHQA--TRTLV- 316 Query: 370 LTEPPLP 350 P LP Sbjct: 317 ---PSLP 320
>DUFFY_GORGO (Q95LF9) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 30.8 bits (68), Expect = 2.6 Identities = 26/67 (38%), Positives = 35/67 (52%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A + L+ E+ A+ + VATPL+LA H RTL Sbjct: 260 LGLDFLVRSKLLLLSTCLAQQALDLLLNLAEALAILHCVATPLILALFYHQA--TRTL-- 315 Query: 370 LTEPPLP 350 L PLP Sbjct: 316 LPSLPLP 322
>DUFFY_CEBAP (Q95LF4) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 30.4 bits (67), Expect = 3.4 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 1/67 (1%) Frame = -2 Query: 547 LQLEIESRTT*LLIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAH 371 L L+ R+ LL+ TC A V+ L+ E+ + + VATPLLLA H T Sbjct: 260 LGLDFLVRSKLLLLPTCLAQQVLDLLLNLAEALTIVHCVATPLLLALF----CHQATRTL 315 Query: 370 LTEPPLP 350 L PLP Sbjct: 316 LPSLPLP 322
>XYLB_PSEPU (P39849) Aryl-alcohol dehydrogenase (EC 1.1.1.90) (Benzyl alcohol| dehydrogenase) (BADH) Length = 366 Score = 29.3 bits (64), Expect = 7.7 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -1 Query: 449 LTLCGCNSIAACQAGAPTGACKNTGAPNRTTSSVNG 342 LT C S AC +G PT +C N+ PN SV G Sbjct: 85 LTFYTCGSCDACLSGDPT-SCANSFGPNFMGRSVTG 119
>GSB_DROME (P09082) Protein gooseberry (Protein gooseberry distal) (BSH9)| Length = 427 Score = 29.3 bits (64), Expect = 7.7 Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 11/78 (14%) Frame = +2 Query: 158 GMEEEEKDSSQTHKDM*IKARRFRMASESTQDSAKEPSCSRWKY-----------CWPLK 304 G E+E +D ++ + K RR R + Q A E +R +Y L Sbjct: 166 GSEDESEDDAEPSVQLKRKQRRSRTTFSNDQIDALERIFARTQYPDVYTREELAQSTGLT 225 Query: 305 QKS*ILWFLNRRSHLRKR 358 + +WF NRR+ LRK+ Sbjct: 226 EARVQVWFSNRRARLRKQ 243
>DUFFY_SAIBB (Q95LF5) Duffy antigen/chemokine receptor (CD234 antigen)| Length = 336 Score = 28.9 bits (63), Expect = 10.0 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = -2 Query: 511 LIFTCEAMVVVFLMFK-TESTALRYVVATPLLLARLGHPRAHARTLAHLTEPPLP 350 L+ TC A V+ L+ E+ A+ + VATPLLLA H T L PLP Sbjct: 272 LLPTCLAQQVLDLLLNLAEALAIVHCVATPLLLALF----CHQTTRTLLPSLPLP 322 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,387,674 Number of Sequences: 219361 Number of extensions: 1728426 Number of successful extensions: 4843 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 4634 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4842 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4430660157 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)