Clone Name | rbart49e02 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_450041.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1666 Score = 258 bits (130), Expect = 2e-65 Identities = 208/234 (88%) Strand = Plus / Minus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1286 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1227 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 433 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1226 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1167 Query: 434 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 493 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1166 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1107 Query: 494 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcag 547 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 1106 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcag 1053
>ref|XM_506634.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1310_F05.17 mRNA Length = 1719 Score = 258 bits (130), Expect = 2e-65 Identities = 208/234 (88%) Strand = Plus / Minus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1332 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1273 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 433 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1272 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1213 Query: 434 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 493 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1212 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1153 Query: 494 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcag 547 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 1152 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcag 1099
>dbj|AK099343.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033028L08, full insert sequence Length = 1666 Score = 258 bits (130), Expect = 2e-65 Identities = 208/234 (88%) Strand = Plus / Minus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1286 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1227 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 433 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1226 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1167 Query: 434 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 493 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1166 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1107 Query: 494 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcag 547 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 1106 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcag 1053
>dbj|AK060378.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-D07, full insert sequence Length = 1719 Score = 258 bits (130), Expect = 2e-65 Identities = 208/234 (88%) Strand = Plus / Minus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1332 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1273 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctggcaagcagcaatggagttgc 433 | || |||| |||||||||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 1272 ctccggtgtccttgcatgcgcccgctggtgccccagcctggcaagcagcaatggtgttgc 1213 Query: 434 aaccacatagcgtaaggccgttgattctgtcttgaacatcaaaaacaccaccaccatcgc 493 | |||||||| || | ||| ||||| ||||||||||||||||||||||| |||||||||| Sbjct: 1212 agccacatagtgtcacgccattgatcctgtcttgaacatcaaaaacacccccaccatcgc 1153 Query: 494 ttcgcatgtaaaaattaacagctatgtagttcgggattctatttccagctgcag 547 |||||||||| |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 1152 ttcgcatgtagtaattcacagctatgaagttagggattctatttccagctgcag 1099
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 410 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 469 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 1173948 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 1174007 Query: 470 catcaaaaacaccaccaccatcgcttcgc 498 ||||||||||||| ||||||||||||||| Sbjct: 1174008 catcaaaaacacccccaccatcgcttcgc 1174036 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 1173694 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 1173753 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 413 | || |||| |||||||||||||| |||||||||||||| Sbjct: 1173754 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 1173793 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 506 aattaacagctatgtagttcgggattctatttccagctgcag 547 |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 1174130 aattcacagctatgaagttagggattctatttccagctgcag 1174171
>dbj|AP005789.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0563F09 Length = 174905 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 410 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 469 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 4822 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 4881 Query: 470 catcaaaaacaccaccaccatcgcttcgc 498 ||||||||||||| ||||||||||||||| Sbjct: 4882 catcaaaaacacccccaccatcgcttcgc 4910 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 4568 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 4627 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 413 | || |||| |||||||||||||| |||||||||||||| Sbjct: 4628 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 4667 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 506 aattaacagctatgtagttcgggattctatttccagctgcag 547 |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 5004 aattcacagctatgaagttagggattctatttccagctgcag 5045
>dbj|AP005569.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1310_F05 Length = 107916 Score = 113 bits (57), Expect = 6e-22 Identities = 81/89 (91%) Strand = Plus / Plus Query: 410 cctggcaagcagcaatggagttgcaaccacatagcgtaaggccgttgattctgtcttgaa 469 |||||||||||||||||| |||||| |||||||| || | ||| ||||| |||||||||| Sbjct: 62542 cctggcaagcagcaatggtgttgcagccacatagtgtcacgccattgatcctgtcttgaa 62601 Query: 470 catcaaaaacaccaccaccatcgcttcgc 498 ||||||||||||| ||||||||||||||| Sbjct: 62602 catcaaaaacacccccaccatcgcttcgc 62630 Score = 95.6 bits (48), Expect = 1e-16 Identities = 87/100 (87%) Strand = Plus / Plus Query: 314 tgaattctatggttcctgaatagacgttcccatttacggaagaggtggttcggttaggtg 373 |||||||||| ||||||||||| ||||| |||||||| ||||||| || |||||||| | Sbjct: 62288 tgaattctatagttcctgaatatacgtttccatttacagaagaggaagtccggttagggg 62347 Query: 374 cgccagtgttcttgcatgcgcccgtgggtgccccagcctg 413 | || |||| |||||||||||||| |||||||||||||| Sbjct: 62348 ctccggtgtccttgcatgcgcccgctggtgccccagcctg 62387 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 506 aattaacagctatgtagttcgggattctatttccagctgcag 547 |||| ||||||||| |||| |||||||||||||||||||||| Sbjct: 62724 aattcacagctatgaagttagggattctatttccagctgcag 62765
>gb|BT018185.1| Zea mays clone EL01N0558E02.c mRNA sequence Length = 1219 Score = 48.1 bits (24), Expect = 0.030 Identities = 39/44 (88%) Strand = Plus / Minus Query: 484 ccaccatcgcttcgcatgtaaaaattaacagctatgtagttcgg 527 ||||| || |||| ||||||||||| |||||| ||||||||||| Sbjct: 873 ccaccgtcacttctcatgtaaaaatcaacagcgatgtagttcgg 830
>gb|AF167451.1| Littorina subrotundata clone Lsub62 microsatellite sequence Length = 362 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 468 aacatcaaaaacaccaccacca 489 |||||||||||||||||||||| Sbjct: 273 aacatcaaaaacaccaccacca 294
>gb|AC141885.3| Mus musculus BAC clone RP24-104I20 from chromosome 16, complete sequence Length = 167248 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 101428 tgcacactatttgttctatcca 101407
>ref|XM_981719.1| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7284 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 1613 tgcacactatttgttctatcca 1592
>ref|XM_358889.5| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7284 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 1613 tgcacactatttgttctatcca 1592
>ref|XM_973263.1| PREDICTED: Mus musculus synaptojanin 1 (Synj1), mRNA Length = 7285 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 1614 tgcacactatttgttctatcca 1593
>gb|AC093502.2| Drosophila melanogaster 3L BAC RP98-48C4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 166249 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 137917 tggaagtactgctggcccttga 137938
>gb|AC010031.8| Drosophila melanogaster 3L BAC RP98-2M20 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 173509 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Plus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 69926 tggaagtactgctggcccttga 69947
>gb|AY118377.1| Drosophila melanogaster RE24170 full insert cDNA Length = 4564 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 463 tggaagtactgctggcccttga 442
>ref|NM_079337.2| Drosophila melanogaster Glued CG9206-RA (Gl), mRNA Length = 4548 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 463 tggaagtactgctggcccttga 442
>dbj|AK080946.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430216F19 product:SYNAPTOJANIN 1 (EC 3.1.3.56) (SYNAPTIC INOSITOL-1,4,5-TRISPHOSPHATE 5- PHOSPHATASE 1) homolog [Rattus norvegicus], full insert sequence Length = 2745 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 1293 tgcacactatttgttctatcca 1272
>dbj|AB093272.1| Mus musculus mRNA for mKIAA0910 protein Length = 6898 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatcca 51 |||||||||||||||||||||| Sbjct: 1212 tgcacactatttgttctatcca 1191
>emb|CR381534.20| Zebrafish DNA sequence from clone DKEY-246J7 in linkage group 20, complete sequence Length = 151308 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 69 ttatctatttctctgaatatag 90 |||||||||||||||||||||| Sbjct: 43262 ttatctatttctctgaatatag 43241
>gb|AE003536.4| Drosophila melanogaster chromosome 3L, section 49 of 83 of the complete sequence Length = 350428 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 190194 tggaagtactgctggcccttga 190173
>gb|J02932.1|DROGLUEDA Fruit fly (D.melanogaster) Glued mRNA, complete cds Length = 4959 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 281 tggaagtactgctggcccttga 302 |||||||||||||||||||||| Sbjct: 891 tggaagtactgctggcccttga 870
>gb|AC092198.5| Homo sapiens chromosome X clone XXbac-10326 map p11.4, complete sequence Length = 158456 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 164 gaagaagaggaaaaggacagt 184 ||||||||||||||||||||| Sbjct: 113473 gaagaagaggaaaaggacagt 113453
>gb|AC126940.4| Mus musculus BAC clone RP23-77E4 from chromosome 19, complete sequence Length = 256476 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 tcacaaacccacaaagacatg 205 ||||||||||||||||||||| Sbjct: 73033 tcacaaacccacaaagacatg 73053
>gb|AC127434.1| Mus musculus BAC clone RP23-189J11 from 19, complete sequence Length = 199422 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 65 ctcattatctatttctctgaatata 89 |||||||||||||||||||| |||| Sbjct: 89426 ctcattatctatttctctgattata 89450
>emb|Z84719.1|HS340G1 Human DNA sequence from clone RP3-340G1 on chromosome 6q16, complete sequence Length = 124010 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 174 aaaaggacagttcacaaaccc 194 ||||||||||||||||||||| Sbjct: 301 aaaaggacagttcacaaaccc 281
>emb|AL590027.10| Human DNA sequence from clone RP11-338L17 on chromosome 13, complete sequence Length = 68556 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 466 tgaacatcaaaaacaccacca 486 ||||||||||||||||||||| Sbjct: 54805 tgaacatcaaaaacaccacca 54785
>gb|AC025774.5| Homo sapiens chromosome 5 clone CTD-2292N2, complete sequence Length = 155092 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tatggaagaagaggaaaagga 180 ||||||||||||||||||||| Sbjct: 139385 tatggaagaagaggaaaagga 139365
>dbj|AK143998.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched library, clone:F530014L18 product:proprotein convertase subtilisin/kexin type 5, full insert sequence Length = 4063 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 185 tcacaaacccacaaagacatg 205 ||||||||||||||||||||| Sbjct: 3446 tcacaaacccacaaagacatg 3466
>gb|AC093218.2| Homo sapiens chromosome 5 clone CTD-2131P18, complete sequence Length = 105360 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Minus Query: 160 tatggaagaagaggaaaagga 180 ||||||||||||||||||||| Sbjct: 15669 tatggaagaagaggaaaagga 15649
>gb|AC010967.3| Homo sapiens BAC clone RP11-7H13 from 2, complete sequence Length = 197328 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 233 gcttcagaatcaacacaagac 253 ||||||||||||||||||||| Sbjct: 110170 gcttcagaatcaacacaagac 110190
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 256 agcgaaagaaccaagttgctc 276 ||||||||||||||||||||| Sbjct: 680685 agcgaaagaaccaagttgctc 680705
>gb|AC153729.1| Mus musculus BAC RP23-88C11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250801 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 cagaatggcttcagaatcaa 245 |||||||||||||||||||| Sbjct: 9773 cagaatggcttcagaatcaa 9792
>ref|NM_003895.2| Homo sapiens synaptojanin 1 (SYNJ1), transcript variant 1, mRNA Length = 6997 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>gb|AC123744.8| Mus musculus chromosome 7, clone RP24-120F8, complete sequence Length = 160977 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ttatctatttctctgaatat 88 |||||||||||||||||||| Sbjct: 67620 ttatctatttctctgaatat 67601
>gb|AC163753.5| Pan troglodytes BAC clone CH251-295G5 from chromosome unknown, complete sequence Length = 176946 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 65757 tgcacactatttgttctatc 65738
>ref|XM_851477.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 5 (LOC478403), mRNA Length = 2870 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851437.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 4 (LOC478403), mRNA Length = 2823 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1220 tgcacactatttgttctatc 1201
>ref|XM_535580.2| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 1 (LOC478403), mRNA Length = 4802 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851354.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 3 (LOC478403), mRNA Length = 4820 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>ref|XM_851310.1| PREDICTED: Canis familiaris similar to synaptojanin 1 isoform b, transcript variant 2 (LOC478403), mRNA Length = 2921 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>gb|AC117678.16| Mus musculus chromosome 6, clone RP23-421M9, complete sequence Length = 204437 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 529 attctatttccagctgcagc 548 |||||||||||||||||||| Sbjct: 169011 attctatttccagctgcagc 169030
>ref|XM_756722.1| Ustilago maydis 521 hypothetical protein (UM05668.1) partial mRNA Length = 5325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 277 cagatggaagtactgctggc 296 |||||||||||||||||||| Sbjct: 4929 cagatggaagtactgctggc 4910
>gb|AC125179.4| Mus musculus BAC clone RP23-321N8 from chromosome 16, complete sequence Length = 193474 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 aacatcaaaaacaccaccaccatc 491 ||||||| |||||||||||||||| Sbjct: 98540 aacatcataaacaccaccaccatc 98563
>gb|BC019630.1| Homo sapiens synaptojanin 1, mRNA (cDNA clone IMAGE:4940362), containing frame-shift errors Length = 2198 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1288 tgcacactatttgttctatc 1269
>ref|XM_792330.1| PREDICTED: Strongylocentrotus purpuratus similar to SUMO1/sentrin specific protease 1 (LOC592825), mRNA Length = 1458 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cggtatggaagaagaggaaaagga 180 ||||||||||||||||||| |||| Sbjct: 678 cggtatggaagaagaggaagagga 701
>ref|XM_505504.1| Yarrowia lipolytica CLIB122, YALI0F16665g predicted mRNA Length = 5268 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 aggttcagaatggcttcaga 240 |||||||||||||||||||| Sbjct: 1898 aggttcagaatggcttcaga 1879
>gb|AC146344.1| Mus musculus strain C57BL/6J clone rp23-74a5, complete sequence Length = 197449 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 63 gactcattatctatttctct 82 |||||||||||||||||||| Sbjct: 16044 gactcattatctatttctct 16025
>ref|XM_783811.1| PREDICTED: Strongylocentrotus purpuratus similar to SUMO1/sentrin specific protease 1 (LOC583923), partial mRNA Length = 926 Score = 40.1 bits (20), Expect = 7.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 157 cggtatggaagaagaggaaaagga 180 ||||||||||||||||||| |||| Sbjct: 465 cggtatggaagaagaggaagagga 488
>emb|AL356118.15| Human DNA sequence from clone RP11-487A2 on chromosome 13, complete sequence Length = 166245 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 470 catcaaaaacaccaccacca 489 |||||||||||||||||||| Sbjct: 37736 catcaaaaacaccaccacca 37755
>gb|BC098395.1| Homo sapiens synaptojanin 1, mRNA (cDNA clone IMAGE:30531044), complete cds Length = 4551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1267 tgcacactatttgttctatc 1248
>emb|BX005124.7| Zebrafish DNA sequence from clone CH211-284A16 in linkage group 20 Contains the 5' end of the xrn2 gene for 5'-3' exoribonuclease 2, a novel gene and a CpG island, complete sequence Length = 148325 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 460 ctgtcttgaacatcaaaaac 479 |||||||||||||||||||| Sbjct: 58027 ctgtcttgaacatcaaaaac 58008
>gb|AF336378.1| Mus musculus Kel blood group protein (Kel), epithelial calcium channel 1 (Ecac1), epithelial calcium channel 2 (Ecac2), and ephrin type A receptor (Mep) genes, complete cds; and T cell receptor beta chain (Tcr) gene, partial cds Length = 169781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 529 attctatttccagctgcagc 548 |||||||||||||||||||| Sbjct: 69679 attctatttccagctgcagc 69660
>gb|AC092867.7| Homo sapiens 12p BAC RP11-100C20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 195583 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 agaagaggaaaaggacagtt 185 |||||||||||||||||||| Sbjct: 77486 agaagaggaaaaggacagtt 77505
>dbj|AP008231.1| Synechococcus elongatus PCC 6301 DNA, complete genome Length = 2696255 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 taggtgcgccagtgttcttg 387 |||||||||||||||||||| Sbjct: 1463261 taggtgcgccagtgttcttg 1463242
>gb|AC023796.22| Homo sapiens 12p BAC RP11-625L16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 173342 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 agaagaggaaaaggacagtt 185 |||||||||||||||||||| Sbjct: 101268 agaagaggaaaaggacagtt 101287
>gb|AC096576.3| Homo sapiens BAC clone RP11-556G22 from 4, complete sequence Length = 213044 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 502 taaaaattaacagctatgta 521 |||||||||||||||||||| Sbjct: 111805 taaaaattaacagctatgta 111824
>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete sequence Length = 157571 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 tgaattctatggttcctgaa 333 |||||||||||||||||||| Sbjct: 58968 tgaattctatggttcctgaa 58987
>gb|AC153969.12| Mus musculus 10 BAC RP24-86H7 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209599 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 cagaatggcttcagaatcaa 245 |||||||||||||||||||| Sbjct: 130549 cagaatggcttcagaatcaa 130530
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aagctcgaaggttcagaatg 232 |||||||||||||||||||| Sbjct: 4662954 aagctcgaaggttcagaatg 4662973 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tggaagaagaggaaaaggac 181 |||||||||||||||||||| Sbjct: 489484 tggaagaagaggaaaaggac 489465
>gb|AC100738.8| Mus musculus chromosome 15, clone RP24-362K21, complete sequence Length = 128950 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 163 ggaagaagaggaaaaggaca 182 |||||||||||||||||||| Sbjct: 90238 ggaagaagaggaaaaggaca 90219
>gb|AC068492.2| Homo sapiens BAC clone RP11-809C23 from 2, complete sequence Length = 172281 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 470 catcaaaaacaccaccacca 489 |||||||||||||||||||| Sbjct: 127950 catcaaaaacaccaccacca 127931
>dbj|AP000038.1| Homo sapiens genomic DNA, chromosome 21q22.1, segment 9/28, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 5864 tgcacactatttgttctatc 5883
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 caccaccaccatcgcttcgc 498 |||||||||||||||||||| Sbjct: 1456733 caccaccaccatcgcttcgc 1456714
>emb|AL954210.1| Pan troglodytes chromosome 22 clone RP43-012J05 map 22q22.11, complete sequence Length = 168835 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 93704 tgcacactatttgttctatc 93723
>emb|Y16368.1|CDY16368 Calonectris diomedea random amplified polymorphic DNA, clone Cd-Rec1-O10f2 Length = 923 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 actcattatctatttctctg 83 |||||||||||||||||||| Sbjct: 904 actcattatctatttctctg 885
>emb|BX294114.8| Zebrafish DNA sequence from clone DKEY-152J12 in linkage group 1, complete sequence Length = 195651 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 92 ctaaaaagctagcaagctgc 111 |||||||||||||||||||| Sbjct: 89945 ctaaaaagctagcaagctgc 89926
>tpe|BN000701.1| TPA: TPA_inf: Gossypium raimondii mRNA for leucoanthocyanidin reductase 2 (lar2 gene) Length = 1319 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caagcagcaatggagttgca 434 |||||||||||||||||||| Sbjct: 551 caagcagcaatggagttgca 532
>tpe|BN000699.1| TPA: TPA_inf: Gossypium arboreum mRNA for leucoanthocyanidin reductase 2 (lar2 gene) Length = 1356 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 caagcagcaatggagttgca 434 |||||||||||||||||||| Sbjct: 563 caagcagcaatggagttgca 544
>dbj|AP000278.2| Homo sapiens genomic DNA, chromosome 21 clone:PQ62G5, complete sequence Length = 26077 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 3848 tgcacactatttgttctatc 3867
>dbj|AP001714.1| Homo sapiens genomic DNA, chromosome 21q, section 58/105 Length = 340000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 310001 tgcacactatttgttctatc 310020
>gb|AF009040.1|AF009040 Homo sapiens synaptojanin mRNA, alternatively spliced, complete cds Length = 4781 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>gb|AF009039.1|AF009039 Homo sapiens synaptojanin mRNA, alternatively spliced, complete cds Length = 4805 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1224 tgcacactatttgttctatc 1205
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aagctcgaaggttcagaatg 232 |||||||||||||||||||| Sbjct: 4662935 aagctcgaaggttcagaatg 4662954 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 tggaagaagaggaaaaggac 181 |||||||||||||||||||| Sbjct: 489484 tggaagaagaggaaaaggac 489465
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aagctcgaaggttcagaatg 232 |||||||||||||||||||| Sbjct: 89173 aagctcgaaggttcagaatg 89154
>emb|BX000492.1|CNS08CDI Oryza sativa chromosome 12, . BAC OSJNBa0024J08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 141089 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 162 tggaagaagaggaaaaggac 181 |||||||||||||||||||| Sbjct: 57288 tggaagaagaggaaaaggac 57307
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 aggttcagaatggcttcaga 240 |||||||||||||||||||| Sbjct: 2230922 aggttcagaatggcttcaga 2230941
>dbj|AP005059.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-286N3, complete sequence Length = 213005 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 281 tggaagtactgctggccctt 300 |||||||||||||||||||| Sbjct: 68823 tggaagtactgctggccctt 68804
>emb|AL807786.6| Mouse DNA sequence from clone RP23-320I1 on chromosome 4, complete sequence Length = 206324 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 63 gactcattatctatttctct 82 |||||||||||||||||||| Sbjct: 88276 gactcattatctatttctct 88295
>ref|NM_203446.1| Homo sapiens synaptojanin 1 (SYNJ1), transcript variant 2, mRNA Length = 7039 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1290 tgcacactatttgttctatc 1271
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 368 taggtgcgccagtgttcttg 387 |||||||||||||||||||| Sbjct: 157622 taggtgcgccagtgttcttg 157641
>dbj|AP000182.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone Q78C10-f32E9, segment 9/21, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 11840 tgcacactatttgttctatc 11859
>dbj|AB020717.2| Homo sapiens mRNA for KIAA0910 protein, partial cds Length = 6997 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 1290 tgcacactatttgttctatc 1271
>dbj|AP000106.1| Homo sapiens genomic DNA of 21q22.1, GART and AML related, Q78C10-149C3 region, segment 9/20 Length = 100000 Score = 40.1 bits (20), Expect = 7.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 tgcacactatttgttctatc 49 |||||||||||||||||||| Sbjct: 11840 tgcacactatttgttctatc 11859 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,392,087 Number of Sequences: 3902068 Number of extensions: 5392087 Number of successful extensions: 108752 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108457 Number of HSP's gapped (non-prelim): 295 length of query: 548 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 525 effective length of database: 17,143,297,704 effective search space: 9000231294600 effective search space used: 9000231294600 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)