ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49e01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
2gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosom... 174 2e-40
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
4dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clon... 174 2e-40
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 174 2e-40
6gb|AY111354.1| Zea mays CL1277_1 mRNA sequence 157 4e-35
7dbj|AB021176.1| Zea mays ZmRCP2 mRNA for root cap protein 2, com... 157 4e-35
8gb|AF134579.1|AF134579 Zea mays clone AGPZm1 arabinogalactan pro... 149 1e-32
9gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome... 101 2e-18
10gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromos... 101 2e-18
11dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 101 2e-18
12gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome... 100 8e-18
13ref|NM_189426.1| Oryza sativa (japonica cultivar-group), predic... 84 5e-13
14ref|NM_189425.1| Oryza sativa (japonica cultivar-group), predic... 84 5e-13
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
16dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic D... 84 5e-13
17dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 5e-13
18gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 gen... 72 2e-09
19dbj|AB108421.1| Oryza sativa (japonica cultivar-group) transposo... 72 2e-09
20dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 72 2e-09
21gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 72 2e-09
22ref|NM_189423.1| Oryza sativa (japonica cultivar-group), predic... 60 7e-06
23dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, com... 56 1e-04
24ref|XM_472395.1| Oryza sativa (japonica cultivar-group), predic... 46 0.10
25emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4,... 46 0.10
26dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.10
27dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.10
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
29dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
30dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
31gb|AC018531.9| Homo sapiens chromosome 11, clone RP11-5O5, compl... 42 1.6
32gb|AC123512.4| Homo sapiens 12 BAC RP11-24B21 (Roswell Park Canc... 42 1.6
33gb|AC093157.2| Homo sapiens chromosome 1 clone RP11-421L21, comp... 42 1.6
34gb|AY321293.1| Lycopersicon esculentum glycine-rich protein TomR... 40 6.3
35gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete ... 40 6.3
36gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
37gb|AC147030.3| Pan troglodytes BAC clone RP43-95K17 from 7, comp... 40 6.3
38gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, comp... 40 6.3
39gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete... 40 6.3
40gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, com... 40 6.3
41emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chr... 40 6.3
42emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on ch... 40 6.3
43emb|AL132794.25|HSJ343I24 Human DNA sequence from clone RP3-343I... 40 6.3
44emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 ... 40 6.3
45gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosom... 40 6.3
46gb|AC099671.2| Homo sapiens chromosome 1 clone RP11-466L22, comp... 40 6.3
47gb|AC011132.15| Homo sapiens chromosome 8, clone RP11-360M9, com... 40 6.3
48gb|AC091919.3| Homo sapiens chromosome 5 clone RP11-24M12, compl... 40 6.3
49gb|AC073421.8| Homo sapiens BAC clone RP11-525A11 from 7, comple... 40 6.3
50gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, co... 40 6.3
51gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome 40 6.3
52gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome... 40 6.3
53gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, compl... 40 6.3
54gb|AC155229.2| Mus musculus BAC clone RP24-335F18 from chromosom... 40 6.3
55emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chro... 40 6.3
56gb|AY026037.1| Lycopersicon esculentum glycine-rich protein LeGR... 40 6.3
57gb|M22408.1|HALSOD H.halobium Mn-containing superoxide dismutase... 40 6.3 
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19
              map R1938, complete sequence
          Length = 160847

 Score =  174 bits (88), Expect = 2e-40
 Identities = 178/208 (85%)
 Strand = Plus / Minus

                                                                          
Query: 256    agcgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccac 315
              |||||| ||||  |||||| | ||||||||||| |||||||| |||| ||   || || |
Sbjct: 139133 agcgcgacacggcgcagtcggcggcgaacaggccggaggtggcgaagctgtggtcgcccc 139074

                                                                          
Query: 316    ccatggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtct 375
              |||  ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 139073 ccagcgtgggcatggacgccctgacgtcgaacttgttgacgtagtcggagcggtacgtct 139014

                                                                          
Query: 376    gtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggt 435
              | ||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 139013 gaccgacgacgccgtgcacgtcgccggtgagcgcgtcgaacttgaacgccaggtcgaggt 138954

                                          
Query: 436    gtgctaggcagtcatcgtcggtaacgcc 463
              | || |||||||| ||| |||| |||||
Sbjct: 138953 gggcgaggcagtcgtcgccggtgacgcc 138926
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>gb|AC116949.11| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0040B10 map R2918, complete sequence
          Length = 149132

 Score =  174 bits (88), Expect = 2e-40
 Identities = 178/208 (85%)
 Strand = Plus / Minus

                                                                         
Query: 256   agcgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccac 315
             |||||| ||||  |||||| | ||||||||||| |||||||| |||| ||   || || |
Sbjct: 15276 agcgcgacacggcgcagtcggcggcgaacaggccggaggtggcgaagctgtggtcgcccc 15217

                                                                         
Query: 316   ccatggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtct 375
             |||  ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 15216 ccagcgtgggcatggacgccctgacgtcgaacttgttgacgtagtcggagcggtacgtct 15157

                                                                         
Query: 376   gtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggt 435
             | ||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 15156 gaccgacgacgccgtgcacgtcgccggtgagcgcgtcgaacttgaacgccaggtcgaggt 15097

                                         
Query: 436   gtgctaggcagtcatcgtcggtaacgcc 463
             | || |||||||| ||| |||| |||||
Sbjct: 15096 gggcgaggcagtcgtcgccggtgacgcc 15069
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score =  174 bits (88), Expect = 2e-40
 Identities = 178/208 (85%)
 Strand = Plus / Minus

                                                                           
Query: 256     agcgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccac 315
               |||||| ||||  |||||| | ||||||||||| |||||||| |||| ||   || || |
Sbjct: 2363134 agcgcgacacggcgcagtcggcggcgaacaggccggaggtggcgaagctgtggtcgcccc 2363075

                                                                           
Query: 316     ccatggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtct 375
               |||  ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 2363074 ccagcgtgggcatggacgccctgacgtcgaacttgttgacgtagtcggagcggtacgtct 2363015

                                                                           
Query: 376     gtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggt 435
               | ||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 2363014 gaccgacgacgccgtgcacgtcgccggtgagcgcgtcgaacttgaacgccaggtcgaggt 2362955

                                           
Query: 436     gtgctaggcagtcatcgtcggtaacgcc 463
               | || |||||||| ||| |||| |||||
Sbjct: 2362954 gggcgaggcagtcgtcgccggtgacgcc 2362927
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>dbj|AK106826.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E12, full
            insert sequence
          Length = 1747

 Score =  174 bits (88), Expect = 2e-40
 Identities = 178/208 (85%)
 Strand = Plus / Plus

                                                                        
Query: 256  agcgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccac 315
            |||||| ||||  |||||| | ||||||||||| |||||||| |||| ||   || || |
Sbjct: 927  agcgcgacacggcgcagtcggcggcgaacaggccggaggtggcgaagctgtggtcgcccc 986

                                                                        
Query: 316  ccatggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtct 375
            |||  ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 987  ccagcgtgggcatggacgccctgacgtcgaacttgttgacgtagtcggagcggtacgtct 1046

                                                                        
Query: 376  gtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggt 435
            | ||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 1047 gaccgacgacgccgtgcacgtcgccggtgagcgcgtcgaacttgaacgccaggtcgaggt 1106

                                        
Query: 436  gtgctaggcagtcatcgtcggtaacgcc 463
            | || |||||||| ||| |||| |||||
Sbjct: 1107 gggcgaggcagtcgtcgccggtgacgcc 1134
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  174 bits (88), Expect = 2e-40
 Identities = 178/208 (85%)
 Strand = Plus / Minus

                                                                           
Query: 256     agcgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccac 315
               |||||| ||||  |||||| | ||||||||||| |||||||| |||| ||   || || |
Sbjct: 2370915 agcgcgacacggcgcagtcggcggcgaacaggccggaggtggcgaagctgtggtcgcccc 2370856

                                                                           
Query: 316     ccatggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtct 375
               |||  ||||||||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct: 2370855 ccagcgtgggcatggacgccctgacgtcgaacttgttgacgtagtcggagcggtacgtct 2370796

                                                                           
Query: 376     gtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggt 435
               | ||||| || ||||| |||||| |||||||||||||||||||||||||||| |||||||
Sbjct: 2370795 gaccgacgacgccgtgcacgtcgccggtgagcgcgtcgaacttgaacgccaggtcgaggt 2370736

                                           
Query: 436     gtgctaggcagtcatcgtcggtaacgcc 463
               | || |||||||| ||| |||| |||||
Sbjct: 2370735 gggcgaggcagtcgtcgccggtgacgcc 2370708
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>gb|AY111354.1| Zea mays CL1277_1 mRNA sequence
          Length = 1328

 Score =  157 bits (79), Expect = 4e-35
 Identities = 163/191 (85%)
 Strand = Plus / Minus

                                                                        
Query: 258  cgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccaccc 317
            |||||||||  |||||| | |||||| |||||||| |||||| || ||   || || |||
Sbjct: 1010 cgcgccacggcgcagtcagcggcgaagaggctggacgtggtgtagttgctgtcccctccc 951

                                                                        
Query: 318  atggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtctgt 377
            |||||||||||||||||| | || |||||  |||||||||||||||||||||||||||| 
Sbjct: 950  atggtgggcatggaggccttgacatcgaaccggttgacgtagtcggagcggtacgtctgg 891

                                                                        
Query: 378  ccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggtgt 437
            |||||||| ||||| |||||| ||||||||||| |||||||||| ||||| || ||||| 
Sbjct: 890  ccgaccacgccgtgcacgtcggcggtgagcgcgccgaacttgaaggccaggtcaaggtgc 831

                       
Query: 438  gctaggcagtc 448
            || ||||||||
Sbjct: 830  gcgaggcagtc 820



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                   
Query: 156  ttcttgcacacaacacctttgccgtccatgccactggcgcaggtgacaccagcga 210
            ||||||||||| || |||| |||  ||||||||||||| |||||||  |||||||
Sbjct: 1124 ttcttgcacaccacgccttggccacccatgccactggcacaggtgatgccagcga 1070
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>dbj|AB021176.1| Zea mays ZmRCP2 mRNA for root cap protein 2, complete cds
          Length = 1318

 Score =  157 bits (79), Expect = 4e-35
 Identities = 163/191 (85%)
 Strand = Plus / Minus

                                                                        
Query: 258  cgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccaccc 317
            |||||||||  |||||| | |||||| |||||||| |||||| || ||   || || |||
Sbjct: 1010 cgcgccacggcgcagtcagcggcgaagaggctggacgtggtgtagttgctgtcccctccc 951

                                                                        
Query: 318  atggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtctgt 377
            |||||||||||||||||| | || |||||  |||||||||||||||||||||||||||| 
Sbjct: 950  atggtgggcatggaggccttgacatcgaaccggttgacgtagtcggagcggtacgtctgg 891

                                                                        
Query: 378  ccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggtgt 437
            |||||||| ||||| |||||| ||||||||||| |||||||||| ||||| || ||||| 
Sbjct: 890  ccgaccacgccgtgcacgtcggcggtgagcgcgccgaacttgaaggccaggtcaaggtgc 831

                       
Query: 438  gctaggcagtc 448
            || ||||||||
Sbjct: 830  gcgaggcagtc 820
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>gb|AF134579.1|AF134579 Zea mays clone AGPZm1 arabinogalactan protein (agp) mRNA, partial
           cds
          Length = 825

 Score =  149 bits (75), Expect = 1e-32
 Identities = 162/191 (84%)
 Strand = Plus / Minus

                                                                       
Query: 258 cgcgccacgctgcagtctggggcgaacaggctggaggtggtgaaggtggcatctccaccc 317
           |||||||||  |||||| | |||||| |||||||| |||||| || ||   || || |||
Sbjct: 660 cgcgccacggcgcagtcagcggcgaagaggctggacgtggtgtagttgctgtcccctccc 601

                                                                       
Query: 318 atggtgggcatggaggccctcacgtcgaaatggttgacgtagtcggagcggtacgtctgt 377
           ||||||||||| |||||| | || |||||  |||||||||||||||||||||||||||| 
Sbjct: 600 atggtgggcattgaggccttgacatcgaaccggttgacgtagtcggagcggtacgtctgg 541

                                                                       
Query: 378 ccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcgaggtgt 437
           |||||||| ||||| |||||| ||||||||||| |||||||||| ||||| || ||||| 
Sbjct: 540 ccgaccacgccgtgcacgtcggcggtgagcgcgccgaacttgaaggccaggtcaaggtgc 481

                      
Query: 438 gctaggcagtc 448
           || ||||||||
Sbjct: 480 gcgaggcagtc 470



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 47/55 (85%)
 Strand = Plus / Minus

                                                                  
Query: 156 ttcttgcacacaacacctttgccgtccatgccactggcgcaggtgacaccagcga 210
           ||||||||||| || |||| |||  ||||||||||||| |||||||  |||||||
Sbjct: 768 ttcttgcacaccacgccttggccacccatgccactggcacaggtgatgccagcga 714
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>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0068N01, complete sequence
          Length = 152233

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                         
Query: 350   gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 40597 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcgc 40538

                                                            
Query: 410   gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcgg 456
              |||||||||||  | || ||||||||  | |||||||| |||||||
Sbjct: 40537 ctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcgg 40491
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>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete
             sequence
          Length = 86190

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                         
Query: 350   gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 41115 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcgc 41056

                                                            
Query: 410   gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcgg 456
              |||||||||||  | || ||||||||  | |||||||| |||||||
Sbjct: 41055 ctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcgg 41009
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  101 bits (51), Expect = 2e-18
 Identities = 93/107 (86%)
 Strand = Plus / Minus

                                                                          
Query: 350    gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
              ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 378950 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggtgagcgc 378891

                                                             
Query: 410    gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcgg 456
               |||||||||||  | || ||||||||  | |||||||| |||||||
Sbjct: 378890 ctcgaacttgaagccgaggtcgaggtggacgaggcagtcgtcgtcgg 378844



 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                            
Query: 368      gtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccag 427
                ||||||||| || | ||| || ||||||||||||||||| |||| |||||||||||||||
Sbjct: 27263370 gtacgtctggcccagcacgccatggacgtcgtcggtgagggcgtagaacttgaacgccag 27263311

                                              
Query: 428      ctcgaggtgtgctaggcagtcatcgtcggt 457
                 |||||||| || |||||||||||||||||
Sbjct: 27263310 gtcgaggtgggcgaggcagtcatcgtcggt 27263281



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 126      ctcaccatatgcatgcaaga 145
                ||||||||||||||||||||
Sbjct: 24521074 ctcaccatatgcatgcaaga 24521055
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>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23,
              complete sequence
          Length = 191765

 Score = 99.6 bits (50), Expect = 8e-18
 Identities = 80/90 (88%)
 Strand = Plus / Minus

                                                                          
Query: 368    gtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccag 427
              ||||||||| || | ||| || ||||||||||||||||| |||| |||||||||||||||
Sbjct: 138338 gtacgtctggcccagcacgccatggacgtcgtcggtgagggcgtagaacttgaacgccag 138279

                                            
Query: 428    ctcgaggtgtgctaggcagtcatcgtcggt 457
               |||||||| || |||||||||||||||||
Sbjct: 138278 gtcgaggtgggcgaggcagtcatcgtcggt 138249
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>ref|NM_189426.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 993

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                       
Query: 350 gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
           ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||  |
Sbjct: 852 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggagaggtc 793

                                                                     
Query: 410 gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
           || |||||||||  | || |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 792 gtagaacttgaagccgaggtcgaggtgagcgaggctgtcctcctcggtgacgccatag 735
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>ref|NM_189425.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 951

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                       
Query: 350 gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
           ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||| |||  |
Sbjct: 810 gttgacgtagtcggagcggtaggtctggccgagcacgccgtggacgtcgtcggagaggtc 751

                                                                     
Query: 410 gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
           || |||||||||  | |  |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 750 gtagaacttgaagccgatgtcgaggtgagcgaggctgtcctcctcggtgacgccatag 693
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                            
Query: 350      gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
                ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||  |
Sbjct: 42699991 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggagaggtc 42699932

                                                                          
Query: 410      gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
                || |||||||||  | || |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 42699931 gtagaacttgaagccgaggtcgaggtgagcgaggctgtcctcctcggtgacgccatag 42699874



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                            
Query: 350      gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
                ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||| |||  |
Sbjct: 42696781 gttgacgtagtcggagcggtaggtctggccgagcacgccgtggacgtcgtcggagaggtc 42696840

                                                                          
Query: 410      gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
                || |||||||||  | |  |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 42696841 gtagaacttgaagccgatgtcgaggtgagcgaggctgtcctcctcggtgacgccatag 42696898



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 93/114 (81%)
 Strand = Plus / Plus

                                                                            
Query: 350      gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
                ||||||||||||||||||||| ||||| ||||  || || ||||| ||||||| |||  |
Sbjct: 42692680 gttgacgtagtcggagcggtaggtctggccgaggacgccatggacatcgtcggagaggtc 42692739

                                                                      
Query: 410      gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgcc 463
                || |||||||||  | || |||||||| || |||| ||| || ||||| |||||
Sbjct: 42692740 gtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcctcggtgacgcc 42692793
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>dbj|AP003448.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1656_A11
          Length = 148887

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                         
Query: 350   gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||  |
Sbjct: 32756 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggagaggtc 32697

                                                                       
Query: 410   gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
             || |||||||||  | || |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 32696 gtagaacttgaagccgaggtcgaggtgagcgaggctgtcctcctcggtgacgccatag 32639



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                         
Query: 350   gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||||||||||||||||||| ||||| |||| ||| |||||||||||||||| |||  |
Sbjct: 29546 gttgacgtagtcggagcggtaggtctggccgagcacgccgtggacgtcgtcggagaggtc 29605

                                                                       
Query: 410   gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
             || |||||||||  | |  |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 29606 gtagaacttgaagccgatgtcgaggtgagcgaggctgtcctcctcggtgacgccatag 29663



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 93/114 (81%)
 Strand = Plus / Plus

                                                                         
Query: 350   gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||||||||||||||||||| ||||| ||||  || || ||||| ||||||| |||  |
Sbjct: 25445 gttgacgtagtcggagcggtaggtctggccgaggacgccatggacatcgtcggagaggtc 25504

                                                                   
Query: 410   gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgcc 463
             || |||||||||  | || |||||||| || |||| ||| || ||||| |||||
Sbjct: 25505 gtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcctcggtgacgcc 25558
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>dbj|AK122054.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033114J03, full
            insert sequence
          Length = 1352

 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                        
Query: 350  gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
            ||||||||||||||||||||| ||||| |||| ||| || ||||||||||||| |||  |
Sbjct: 1004 gttgacgtagtcggagcggtaggtctggccgagcacgccatggacgtcgtcggagaggtc 945

                                                                      
Query: 410  gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgccatag 467
            || |||||||||  | || |||||||| || |||| ||| || ||||| |||||||||
Sbjct: 944  gtagaacttgaagccgaggtcgaggtgagcgaggctgtcctcctcggtgacgccatag 887
to top
>gb|AC077693.19| Oryza sativa chromosome 10 BAC OSJNBa0095C07 genomic sequence, complete
              sequence
          Length = 187707

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                          
Query: 372    gtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcg 431
              ||||| |||| ||| || |||||||||||||||||||| |||||||||||  | || |||
Sbjct: 159676 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 159735

                                              
Query: 432    aggtgtgctaggcagtcatcgtcggtaacgcc 463
              |||||  | |||||||| |||||||| |||||
Sbjct: 159736 aggtggacgaggcagtcgtcgtcggtgacgcc 159767
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>dbj|AB108421.1| Oryza sativa (japonica cultivar-group) transposon, AnacB14, complete
            sequence
          Length = 7551

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Minus

                                                                        
Query: 372  gtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcg 431
            ||||| |||| ||| || |||||||||||||||||||| |||||||||||  | || |||
Sbjct: 5447 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 5388

                                            
Query: 432  aggtgtgctaggcagtcatcgtcggtaacgcc 463
            |||||  | |||||||| |||||||| |||||
Sbjct: 5387 aggtggacgaggcagtcgtcgtcggtgacgcc 5356
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                            
Query: 372      gtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcg 431
                ||||| |||| ||| || |||||||||||||||||||| |||||||||||  | || |||
Sbjct: 22154732 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 22154791

                                                
Query: 432      aggtgtgctaggcagtcatcgtcggtaacgcc 463
                |||||  | |||||||| |||||||| |||||
Sbjct: 22154792 aggtggacgaggcagtcgtcgtcggtgacgcc 22154823
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 78/92 (84%)
 Strand = Plus / Plus

                                                                            
Query: 372      gtctgtccgaccacaccgtggacgtcgtcggtgagcgcgtcgaacttgaacgccagctcg 431
                ||||| |||| ||| || |||||||||||||||||||| |||||||||||  | || |||
Sbjct: 22166795 gtctggccgagcacgccatggacgtcgtcggtgagcgcctcgaacttgaagccgaggtcg 22166854

                                                
Query: 432      aggtgtgctaggcagtcatcgtcggtaacgcc 463
                |||||  | |||||||| |||||||| |||||
Sbjct: 22166855 aggtggacgaggcagtcgtcgtcggtgacgcc 22166886
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>ref|NM_189423.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 93/114 (81%)
 Strand = Plus / Minus

                                                                       
Query: 350 gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
           ||||||||||||||||||||| ||||| ||||  || || ||||| ||||||| |||  |
Sbjct: 834 gttgacgtagtcggagcggtaggtctggccgaggacgccatggacatcgtcggagaggtc 775

                                                                 
Query: 410 gtcgaacttgaacgccagctcgaggtgtgctaggcagtcatcgtcggtaacgcc 463
           || |||||||||  | || |||||||| || |||| ||| || ||||| |||||
Sbjct: 774 gtagaacttgaagccgaggtcgaggtgggcgaggctgtcctcctcggtgacgcc 721
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>dbj|AB021175.1| Zea mays ZmRCP1 mRNA for root cap protein 1, complete cds
          Length = 1225

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                       
Query: 350 gttgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
           |||||||||||| | |||||| ||||| || | ||| ||||| ||||||||||||||  |
Sbjct: 900 gttgacgtagtccgggcggtaggtctggcccagcacgccgtgcacgtcgtcggtgaggtc 841

                       
Query: 410 gtcgaacttgaa 421
           || |||||||||
Sbjct: 840 gtagaacttgaa 829
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>ref|XM_472395.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                       
Query: 352 tgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgt 411
           |||||||||||| |||||| ||||| || | ||| ||||| |||||| || |||  | ||
Sbjct: 859 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 800

                          
Query: 412 cgaacttgaacgcca 426
            ||||||||||||||
Sbjct: 799 agaacttgaacgcca 785
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>emb|AL662947.3|OSJN00148 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0073L04,
             complete sequence
          Length = 143301

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                         
Query: 352   tgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgt 411
             |||||||||||| |||||| ||||| || | ||| ||||| |||||| || |||  | ||
Sbjct: 21066 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 21007

                            
Query: 412   cgaacttgaacgcca 426
              ||||||||||||||
Sbjct: 21006 agaacttgaacgcca 20992
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                            
Query: 352      tgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgt 411
                |||||||||||| |||||| ||||| || | ||| ||||| |||||| || |||  | ||
Sbjct: 20290433 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 20290374

                               
Query: 412      cgaacttgaacgcca 426
                 ||||||||||||||
Sbjct: 20290373 agaacttgaacgcca 20290359
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>dbj|AK108077.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-138-E01, full
           insert sequence
          Length = 1481

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                       
Query: 352 tgacgtagtcggagcggtacgtctgtccgaccacaccgtggacgtcgtcggtgagcgcgt 411
           |||||||||||| |||||| ||||| || | ||| ||||| |||||| || |||  | ||
Sbjct: 944 tgacgtagtcggggcggtaggtctggcccagcacgccgtgcacgtcggcgctgatggagt 885

                          
Query: 412 cgaacttgaacgcca 426
            ||||||||||||||
Sbjct: 884 agaacttgaacgcca 870
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 372      gtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
                ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 28348639 gtctggccgagcacgccatggacgtcgtcggtgagcgc 28348602
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>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0661G04
          Length = 157292

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 372   gtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
             ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 61217 gtctggccgagcacgccatggacgtcgtcggtgagcgc 61180
to top
>dbj|AP005395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0623A10
          Length = 156517

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 372    gtctgtccgaccacaccgtggacgtcgtcggtgagcgc 409
              ||||| |||| ||| || ||||||||||||||||||||
Sbjct: 146668 gtctggccgagcacgccatggacgtcgtcggtgagcgc 146631
to top
>gb|AC018531.9| Homo sapiens chromosome 11, clone RP11-5O5, complete sequence
          Length = 165968

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 57     gtttatgtcctttgcttattt 77
              |||||||||||||||||||||
Sbjct: 137364 gtttatgtcctttgcttattt 137344
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>gb|AC123512.4| Homo sapiens 12 BAC RP11-24B21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 86706

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   ggaggtggtgaaggtggcatc 310
             |||||||||||||||||||||
Sbjct: 83016 ggaggtggtgaaggtggcatc 83036
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>gb|AC093157.2| Homo sapiens chromosome 1 clone RP11-421L21, complete sequence
          Length = 192589

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 47     aaagacatgagtttatgtcctttgc 71
              ||||||||||||| |||||||||||
Sbjct: 176806 aaagacatgagttcatgtcctttgc 176782
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>gb|AY321293.1| Lycopersicon esculentum glycine-rich protein TomR2 (TomR2) gene,
            complete cds
          Length = 1463

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  gctggaggtggtgaaggtgg 306
            ||||||||||||||||||||
Sbjct: 1209 gctggaggtggtgaaggtgg 1228



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 gctggaggtggtgaaggtgg 306
           ||||||||||||||||||||
Sbjct: 789 gctggaggtggtgaaggtgg 808
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>gb|CP000057.1| Haemophilus influenzae strain 86-028NP, complete genome
          Length = 1913428

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   cgctgcagtctggggcgaac 284
             ||||||||||||||||||||
Sbjct: 61522 cgctgcagtctggggcgaac 61503
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>gb|AC130597.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017K09, complete sequence
          Length = 155525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 126   ctcaccatatgcatgcaaga 145
             ||||||||||||||||||||
Sbjct: 35256 ctcaccatatgcatgcaaga 35237
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>gb|AC147030.3| Pan troglodytes BAC clone RP43-95K17 from 7, complete sequence
          Length = 166955

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 99112 atgagtttatgtcctttgct 99131
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>gb|AC146244.3| Pan troglodytes BAC clone RP43-27M14 from 7, complete sequence
          Length = 161963

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 37264 atgagtttatgtcctttgct 37245
to top
>gb|AC002463.1| Homo sapiens BAC clone CTA-302F4 from 7, complete sequence
          Length = 135684

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 12514 atgagtttatgtcctttgct 12533
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>gb|AC113204.7| Mus musculus chromosome 12, clone RP23-312J1, complete sequence
          Length = 207293

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    taaagttacaagttccaaag 50
             ||||||||||||||||||||
Sbjct: 21793 taaagttacaagttccaaag 21812
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>emb|AL596089.19| Human DNA sequence from clone RP11-414A5 on chromosome 6 Contains the
             3' end of the LPA gene for lipoprotein (Lp(a)) and a CpG
             island, complete sequence
          Length = 135751

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 48    aagacatgagtttatgtcctttgc 71
             |||||||||||| |||||||||||
Sbjct: 11085 aagacatgagttcatgtcctttgc 11062
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>emb|AL354736.10| Human DNA sequence from clone RP11-205B18 on chromosome 13 Contains the
             5' end of a novel gene (FLJ32909), complete sequence
          Length = 158460

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 18    atatttcttgatataaagtt 37
             ||||||||||||||||||||
Sbjct: 91816 atatttcttgatataaagtt 91835
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>emb|AL132794.25|HSJ343I24 Human DNA sequence from clone RP3-343I24 on chromosome 6q13-14.1,
             complete sequence
          Length = 114728

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 13    acattatatttcttgatata 32
             ||||||||||||||||||||
Sbjct: 94064 acattatatttcttgatata 94045
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>emb|AL049732.11|HSDA14C6 Human DNA sequence from clone RP6-14C6 on chromosome Xp11.21-11.23
             Contains  the 3' end of the PFKFB1 gene for
             6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1, and
             the TRO gene for trophinin, complete sequence
          Length = 103115

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 14433 atgagtttatgtcctttgct 14452
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>gb|AC158997.2| Mus musculus BAC clone RP24-176F12 from chromosome 9, complete sequence
          Length = 187558

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 428    ctcgaggtgtgctaggcagtcatc 451
              ||||||||||||||||| ||||||
Sbjct: 177978 ctcgaggtgtgctaggctgtcatc 177955
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>gb|AC099671.2| Homo sapiens chromosome 1 clone RP11-466L22, complete sequence
          Length = 153934

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 36290 atgagtttatgtcctttgct 36271
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>gb|AC011132.15| Homo sapiens chromosome 8, clone RP11-360M9, complete sequence
          Length = 216334

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tttatgtcctttgcttattt 77
             ||||||||||||||||||||
Sbjct: 87926 tttatgtcctttgcttattt 87907
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>gb|AC091919.3| Homo sapiens chromosome 5 clone RP11-24M12, complete sequence
          Length = 166358

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 50379 atgagtttatgtcctttgct 50398
to top
>gb|AC073421.8| Homo sapiens BAC clone RP11-525A11 from 7, complete sequence
          Length = 98415

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 53    atgagtttatgtcctttgct 72
             ||||||||||||||||||||
Sbjct: 69569 atgagtttatgtcctttgct 69550
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>gb|AC087174.4| Homo sapiens chromosome 11, clone RP11-640J11, complete sequence
          Length = 187218

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     atgagtttatgtcctttgct 72
              ||||||||||||||||||||
Sbjct: 146779 atgagtttatgtcctttgct 146760
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>gb|AE017340.1| Idiomarina loihiensis L2TR, complete genome
          Length = 2839318

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 344     gaaatggttgacgtagtcggagcg 367
               |||||||||| |||||||||||||
Sbjct: 1628619 gaaatggttgccgtagtcggagcg 1628596
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>gb|AC157513.2| Mus musculus BAC clone RP24-280G4 from chromosome 9, complete sequence
          Length = 177728

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 428    ctcgaggtgtgctaggcagtcatc 451
              ||||||||||||||||| ||||||
Sbjct: 158148 ctcgaggtgtgctaggctgtcatc 158171
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>gb|AC112515.4| Homo sapiens chromosome 3 clone RP11-697B5, complete sequence
          Length = 179154

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    catgagtttatgtcctttgc 71
             ||||||||||||||||||||
Sbjct: 99902 catgagtttatgtcctttgc 99921
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>gb|AC155229.2| Mus musculus BAC clone RP24-335F18 from chromosome 12, complete
             sequence
          Length = 156833

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 31    taaagttacaagttccaaag 50
             ||||||||||||||||||||
Sbjct: 25317 taaagttacaagttccaaag 25298
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>emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chromosome X, complete
             sequence
          Length = 199534

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 58    tttatgtcctttgcttattt 77
             ||||||||||||||||||||
Sbjct: 81940 tttatgtcctttgcttattt 81921
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>gb|AY026037.1| Lycopersicon esculentum glycine-rich protein LeGRP1 mRNA, complete
           cds
          Length = 1140

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 gctggaggtggtgaaggtgg 306
           ||||||||||||||||||||
Sbjct: 875 gctggaggtggtgaaggtgg 894



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 287 gctggaggtggtgaaggtgg 306
           ||||||||||||||||||||
Sbjct: 455 gctggaggtggtgaaggtgg 474
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>gb|M22408.1|HALSOD H.halobium Mn-containing superoxide dismutase (Mn-SOD) gene, complete
            cds
          Length = 1827

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 388  cgtggacgtcgtcggtgagcgcgtcgaa 415
            |||| |||| ||||||||||||||||||
Sbjct: 1238 cgtgcacgtggtcggtgagcgcgtcgaa 1265


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,546,963
Number of Sequences: 3902068
Number of extensions: 3546963
Number of successful extensions: 80208
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79835
Number of HSP's gapped (non-prelim): 368
length of query: 467
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 445
effective length of database: 17,147,199,772
effective search space: 7630503898540
effective search space used: 7630503898540
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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