Clone Name | rbart49d12 |
---|---|
Clone Library Name | barley_pub |
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 50.1 bits (25), Expect = 0.001 Identities = 25/25 (100%) Strand = Plus / Plus Query: 54 gcacttacaatgatgaggggatgtg 78 ||||||||||||||||||||||||| Sbjct: 21236823 gcacttacaatgatgaggggatgtg 21236847
>dbj|AK071684.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023108B15, full insert sequence Length = 1256 Score = 50.1 bits (25), Expect = 0.001 Identities = 25/25 (100%) Strand = Plus / Minus Query: 54 gcacttacaatgatgaggggatgtg 78 ||||||||||||||||||||||||| Sbjct: 1041 gcacttacaatgatgaggggatgtg 1017
>dbj|AP006548.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone: P0705E11 Length = 140729 Score = 50.1 bits (25), Expect = 0.001 Identities = 25/25 (100%) Strand = Plus / Plus Query: 54 gcacttacaatgatgaggggatgtg 78 ||||||||||||||||||||||||| Sbjct: 107580 gcacttacaatgatgaggggatgtg 107604
>gb|AY104299.1| Zea mays PCO075569 mRNA sequence Length = 2139 Score = 44.1 bits (22), Expect = 0.057 Identities = 25/26 (96%) Strand = Plus / Minus Query: 56 acttacaatgatgaggggatgtgctg 81 ||||||||||| |||||||||||||| Sbjct: 1955 acttacaatgacgaggggatgtgctg 1930
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 42.1 bits (21), Expect = 0.23 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 tgatgaggggatgtgctgttt 84 ||||||||||||||||||||| Sbjct: 10184 tgatgaggggatgtgctgttt 10204
>emb|AL021331.1|HS366N23 Human DNA sequence from clone RP3-366N23 on chromosome 6q27 Contains the UNC93A gene for unc-93 homolog A (C. elegans), the gene for NYD-TSPG protein, a Mitotic Feedback Control Protein MADP2 Homolog LIKE pseudogene and the 3' end of the TCP10 gene for t-complex 10 (mouse), complete sequence Length = 98517 Score = 40.1 bits (20), Expect = 0.89 Identities = 23/24 (95%) Strand = Plus / Plus Query: 51 acggcacttacaatgatgagggga 74 |||||||||||||| ||||||||| Sbjct: 40880 acggcacttacaatcatgagggga 40903
>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete sequence Length = 90698 Score = 40.1 bits (20), Expect = 0.89 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 caatagtacgtatgacacaa 51 |||||||||||||||||||| Sbjct: 18466 caatagtacgtatgacacaa 18485
>ref|XM_450198.1| Oryza sativa (japonica cultivar-group), mRNA Length = 330 Score = 38.2 bits (19), Expect = 3.5 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 acaatgatgaggggatgtg 78 ||||||||||||||||||| Sbjct: 301 acaatgatgaggggatgtg 283
>gb|AY333070.1| Drosophila virilis antennapedia (Antp), CG10013 (CG10013), CG31217 (CG31217), and ultrabithorax (Ubx) genes, complete cds Length = 308092 Score = 38.2 bits (19), Expect = 3.5 Identities = 19/19 (100%) Strand = Plus / Plus Query: 4 catagcaccaagtaggaac 22 ||||||||||||||||||| Sbjct: 60001 catagcaccaagtaggaac 60019
>emb|AL359390.14| Human DNA sequence from clone RP11-139E24 on chromosome 1, complete sequence Length = 83750 Score = 38.2 bits (19), Expect = 3.5 Identities = 22/23 (95%) Strand = Plus / Minus Query: 61 caatgatgaggggatgtgctgtt 83 |||||| |||||||||||||||| Sbjct: 50395 caatgaagaggggatgtgctgtt 50373 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 422,957 Number of Sequences: 3902068 Number of extensions: 422957 Number of successful extensions: 24039 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 24018 Number of HSP's gapped (non-prelim): 21 length of query: 84 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 63 effective length of database: 17,151,101,840 effective search space: 1080519415920 effective search space used: 1080519415920 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)