ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49d10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome... 70 6e-09
2gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome... 70 6e-09
3dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 70 6e-09
4gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 70 6e-09
5gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome... 68 2e-08
6gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full... 64 4e-07
7gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome... 60 6e-06
8dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 4e-04
9gb|AY107519.1| Zea mays PCO078033 mRNA sequence 46 0.085
10gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, comp... 42 1.3
11gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P1... 42 1.3
12ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related prote... 42 1.3
13ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predi... 42 1.3
14gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, co... 42 1.3
15dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.3
16emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 42 1.3
17gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosom... 40 5.3
18ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (pro... 40 5.3
19emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chro... 40 5.3
20ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.3
21gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete... 40 5.3
22dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RI... 40 5.3
23gb|AF486627.1| Mus musculus experimental autoimmune prostatitis ... 40 5.3
24dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
25dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.3
26dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 5.3
27gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, comple... 40 5.3
28ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm... 40 5.3
29emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chro... 40 5.3 
>gb|AC135258.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0097K08 map C827S, complete sequence
          Length = 137870

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Minus

                                                                         
Query: 240   atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 299
             ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 45028 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 44969

                    
Query: 300   agccagc 306
             | |||||
Sbjct: 44968 atccagc 44962
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>gb|AC147811.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0026P08 map near C827S, complete sequence
          Length = 148676

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                         
Query: 240   atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 299
             ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 50747 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 50806

                    
Query: 300   agccagc 306
             | |||||
Sbjct: 50807 atccagc 50813
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 240     atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 299
               ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 7137527 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 7137586

                      
Query: 300     agccagc 306
               | |||||
Sbjct: 7137587 atccagc 7137593



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                            
Query: 239      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
                ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 11353886 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11353945

                                                                            
Query: 299      aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 358
                ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 11353946 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 11354005

                                                  
Query: 359      atcaccagcatgagcatatccatgaggtgctggg 392
                | ||||| |||   || |||||||||| ||||||
Sbjct: 11354006 accaccatcatagccacatccatgaggagctggg 11354039



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                            
Query: 243      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 302
                ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 11352004 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 11352062

                 
Query: 303      c 303
                |
Sbjct: 11352063 c 11352063



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 243      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 300
                |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11549315 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 11549372



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 242      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 292
                ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 11329598 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 11329648



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                            
Query: 242      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 301
                ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 11294531 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 11294590

                  
Query: 302      cc 303
                ||
Sbjct: 11294591 cc 11294592



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 245      tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 304
                |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 11485504 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 11485445

                                 
Query: 305      gccttggtgaagatctc 321
                || || |||||||||||
Sbjct: 11485444 gcattagtgaagatctc 11485428



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 239      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
                |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 11437238 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 11437297

                     
Query: 299      aagcc 303
                |||||
Sbjct: 11437298 aagcc 11437302



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 261      ctcgagctcccagcttcttgacaatcttatag 292
                |||||||||| ||| |||| ||||||||||||
Sbjct: 11490647 ctcgagctccaagcatcttcacaatcttatag 11490678
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 69.9 bits (35), Expect = 6e-09
 Identities = 59/67 (88%)
 Strand = Plus / Plus

                                                                           
Query: 240     atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 299
               ||||||||||||| |  |||||||||||||| ||||||||| | ||||||||| ||||||
Sbjct: 7203498 atggatagacctcgaacacagctcgagctccgagcttcttggcgatcttatagtcactga 7203557

                      
Query: 300     agccagc 306
               | |||||
Sbjct: 7203558 atccagc 7203564



 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                            
Query: 239      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
                ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 11433075 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 11433134

                                                                            
Query: 299      aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 358
                ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 11433135 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 11433194

                                                  
Query: 359      atcaccagcatgagcatatccatgaggtgctggg 392
                | ||||| |||   || |||||||||| ||||||
Sbjct: 11433195 accaccatcatagccacatccatgaggagctggg 11433228



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                            
Query: 243      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 302
                ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 11431193 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 11431251

                 
Query: 303      c 303
                |
Sbjct: 11431252 c 11431252



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 243      gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 300
                |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 11628504 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 11628561



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                   
Query: 242      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 292
                ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 11408787 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 11408837



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                            
Query: 242      ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 301
                ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 11373720 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 11373779

                  
Query: 302      cc 303
                ||
Sbjct: 11373780 cc 11373781



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                            
Query: 245      tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 304
                |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 11564693 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 11564634

                                 
Query: 305      gccttggtgaagatctc 321
                || || |||||||||||
Sbjct: 11564633 gcattagtgaagatctc 11564617



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                            
Query: 239      tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
                |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 11516427 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 11516486

                     
Query: 299      aagcc 303
                |||||
Sbjct: 11516487 aagcc 11516491



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 261      ctcgagctcccagcttcttgacaatcttatag 292
                |||||||||| ||| |||| ||||||||||||
Sbjct: 11569836 ctcgagctccaagcatcttcacaatcttatag 11569867
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>gb|AC112208.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0015P05
              map C53961S, complete sequence
          Length = 175121

 Score = 67.9 bits (34), Expect = 2e-08
 Identities = 124/154 (80%)
 Strand = Plus / Plus

                                                                          
Query: 239    tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
              ||||| |||||||||| |||  ||||||||||||| ||||| ||||| || ||| |||||
Sbjct: 140244 tatgggtagacctcaaagacgcctcgagctcccagtttcttcacaatattgtagtcactg 140303

                                                                          
Query: 299    aagccagccttggtgaagatctcgttccagtccttctcttcccgctgtcggcctctcgtc 358
              ||||| || ||| ||||||  ||   ||| || ||||| || |||||||||||| | |||
Sbjct: 140304 aagcctgctttgctgaagagatcacgccaatcattctcgtctcgctgtcggcctttggtc 140363

                                                
Query: 359    atcaccagcatgagcatatccatgaggtgctggg 392
              | ||||| |||   || |||||||||| ||||||
Sbjct: 140364 accaccatcatagccacatccatgaggagctggg 140397



 Score = 65.9 bits (33), Expect = 9e-08
 Identities = 55/61 (90%), Gaps = 1/61 (1%)
 Strand = Plus / Plus

                                                                          
Query: 243    gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagc 302
              ||||||||||||  | ||||||||||||||| ||||| |||||||||||| |||||||||
Sbjct: 138362 gatagacctcaaatatagctcgagctcccag-ttcttcacaatcttatagtcactgaagc 138420

               
Query: 303    c 303
              |
Sbjct: 138421 c 138421



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Plus

                                                                 
Query: 242    ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 292
              ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 115956 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 116006



 Score = 44.1 bits (22), Expect = 0.34
 Identities = 52/62 (83%)
 Strand = Plus / Plus

                                                                         
Query: 242   ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaag 301
             ||||||||||||||||||   |||| |||||  ||||| |||||||| ||| | ||||||
Sbjct: 80889 ggatagacctcaatgacacaccgaggtcccaatttcttcacaatcttgtagtccctgaag 80948

               
Query: 302   cc 303
             ||
Sbjct: 80949 cc 80950
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>gb|BT009571.1| Triticum aestivum clone wre1n.pk0021.e3:fis, full insert mRNA
           sequence
          Length = 770

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 53/60 (88%)
 Strand = Plus / Minus

                                                                       
Query: 233 caaccttatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 292
           |||||||||||||||||||| |||||| |||||   || || ||||||||||||||||||
Sbjct: 517 caaccttatggatagacctcgatgacacctcgatggccaagtttcttgacaatcttatag 458
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>gb|AC138195.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0005P21, complete sequence
          Length = 147381

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                       
Query: 243   gatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaa 300
             |||||||||| | |||||||||||| || || ||||| |||||||||||| |||||||
Sbjct: 64473 gatagacctcgaagacagctcgagcaccaagtttcttcacaatcttatagtcactgaa 64416



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                          
Query: 245    tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 304
              |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 128284 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 128343

                               
Query: 305    gccttggtgaagatctc 321
              || || |||||||||||
Sbjct: 128344 gcattagtgaagatctc 128360



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 261    ctcgagctcccagcttcttgacaatcttatag 292
              |||||||||| ||| |||| ||||||||||||
Sbjct: 123141 ctcgagctccaagcatcttcacaatcttatag 123110
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>dbj|AK061247.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-E05, full
            insert sequence
          Length = 1262

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 45/51 (88%)
 Strand = Plus / Minus

                                                               
Query: 242  ggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatag 292
            ||||||||||||| |||||||||||||| ||  || || ||||||||||||
Sbjct: 1167 ggatagacctcaaagacagctcgagctctcaattttttcacaatcttatag 1117
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>gb|AY107519.1| Zea mays PCO078033 mRNA sequence
          Length = 1299

 Score = 46.1 bits (23), Expect = 0.085
 Identities = 65/79 (82%)
 Strand = Plus / Minus

                                                                        
Query: 240  atggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactga 299
            |||| |||||||| |||||| | |||||||| |  |||||||||| ||| ||| |   ||
Sbjct: 1107 atgggtagacctcgatgacaccacgagctccgattttcttgacaaccttgtagtcggaga 1048

                               
Query: 300  agccagccttggtgaagat 318
            ||||||||||||| |||||
Sbjct: 1047 agccagccttggtaaagat 1029
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>gb|AC101777.8| Mus musculus chromosome 1, clone RP24-123J3, complete sequence
          Length = 177788

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 174    agagtgagcacacacaacaat 194
              |||||||||||||||||||||
Sbjct: 156171 agagtgagcacacacaacaat 156151
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>gb|AC135793.4| Oryza sativa chromosome 11 BAC clone OSJNBb0017P15, complete sequence
          Length = 128418

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 239   tatggatagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactg 298
             |||||||||||||||| ||   |||||  ||| |||||||| |||||||| ||  |||||
Sbjct: 62299 tatggatagacctcaaagatgcctcgaattcctagcttcttcacaatcttgtaatcactg 62240

                  
Query: 299   aagcc 303
             |||||
Sbjct: 62239 aagcc 62235



 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Plus

                                                                         
Query: 245   tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 304
             |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 14033 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 14092

                              
Query: 305   gccttggtgaagatctc 321
             || || |||||||||||
Sbjct: 14093 gcattagtgaagatctc 14109



 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 261  ctcgagctcccagcttcttgacaatcttatag 292
            |||||||||| ||| |||| ||||||||||||
Sbjct: 8890 ctcgagctccaagcatcttcacaatcttatag 8859
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>ref|XM_746399.1| Aspergillus fumigatus Af293 actin-related protein ArpA (Afu4g13390)
           partial mRNA
          Length = 1146

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 324 tccagtccttctcttcccgct 344
           |||||||||||||||||||||
Sbjct: 700 tccagtccttctcttcccgct 680
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>ref|XM_501466.1| Yarrowia lipolytica CLIB122, YALI0C05258g predicted mRNA
          Length = 1599

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 308 ttggtgaagatctcgttccagtccttctc 336
           ||||||| |||| ||||||||||||||||
Sbjct: 479 ttggtgatgatcacgttccagtccttctc 451
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>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence
          Length = 192542

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 174    agagtgagcacacacaacaat 194
              |||||||||||||||||||||
Sbjct: 174551 agagtgagcacacacaacaat 174571
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>dbj|AK109384.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-211-A06, full
            insert sequence
          Length = 1300

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 63/77 (81%)
 Strand = Plus / Minus

                                                                        
Query: 245  tagacctcaatgacagctcgagctcccagcttcttgacaatcttatagccactgaagcca 304
            |||||||||||||||  ||||||||| || || || |  ||||| ||| | ||||| |||
Sbjct: 1184 tagacctcaatgacacatcgagctcctagtttgttcatgatcttgtagtcgctgaatcca 1125

                             
Query: 305  gccttggtgaagatctc 321
            || || |||||||||||
Sbjct: 1124 gcattagtgaagatctc 1108
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 308    ttggtgaagatctcgttccagtccttctc 336
              ||||||| |||| ||||||||||||||||
Sbjct: 668163 ttggtgatgatcacgttccagtccttctc 668191
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>gb|AC134248.3| Mus musculus BAC clone RP23-338G21 from chromosome 9, complete
            sequence
          Length = 206805

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcctctcgtcatcaccagca 368
            ||||||||||||||||||||
Sbjct: 5546 gcctctcgtcatcaccagca 5565
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>ref|XM_989083.1| PREDICTED: Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 5470

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcctctcgtcatcaccagca 368
            ||||||||||||||||||||
Sbjct: 1479 gcctctcgtcatcaccagca 1498
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>emb|AL591804.5| Human DNA sequence from clone RP11-457O1 on chromosome X, complete
             sequence
          Length = 112366

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    ctgcatactatctttttcca 59
             ||||||||||||||||||||
Sbjct: 90051 ctgcatactatctttttcca 90032
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>ref|XM_791236.1| PREDICTED: Strongylocentrotus purpuratus similar to HBS1-like protein
            (LOC591684), partial mRNA
          Length = 3640

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 266  gctcccagcttcttgacaat 285
            ||||||||||||||||||||
Sbjct: 3428 gctcccagcttcttgacaat 3409
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>gb|AC011291.8| Homo sapiens BAC clone RP11-67G7 from 2, complete sequence
          Length = 150214

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    tagaatatgaaaagcagtctaact 41
             |||||||||| |||||||||||||
Sbjct: 57275 tagaatatgataagcagtctaact 57298
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>dbj|AK035279.1| Mus musculus adult male urinary bladder cDNA, RIKEN full-length
            enriched library, clone:9530008N10 product:similar to
            DORSAL PROSTATE PROTEIN-GLUTAMINE
            GAMMA-GLUTAMYLTRANSFERASE (EC 2.3.2.13) (DORSAL PROSTATE
            TRANSGLUTAMINASE) (DORSAL PROTEIN 1) (DP1) [Rattus
            norvegicus], full insert sequence
          Length = 2768

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcctctcgtcatcaccagca 368
            ||||||||||||||||||||
Sbjct: 1831 gcctctcgtcatcaccagca 1850
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>gb|AF486627.1| Mus musculus experimental autoimmune prostatitis antigen 1 (Eapa1)
            mRNA, complete cds
          Length = 2303

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcctctcgtcatcaccagca 368
            ||||||||||||||||||||
Sbjct: 1829 gcctctcgtcatcaccagca 1848
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>dbj|AK106179.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-C11, full
            insert sequence
          Length = 1362

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 261  ctcgagctcccagcttcttgacaatcttatag 292
            |||||||||| ||| |||| ||||||||||||
Sbjct: 1134 ctcgagctccaagcatcttcacaatcttatag 1103
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>dbj|AK059770.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-H05, full
            insert sequence
          Length = 1264

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 261  ctcgagctcccagcttcttgacaatcttatag 292
            |||||||||| ||| |||| ||||||||||||
Sbjct: 1139 ctcgagctccaagcatcttcacaatcttatag 1108
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>dbj|AP001458.6| Homo sapiens genomic DNA, chromosome 11 clone:RP11-831H9, complete
             sequence
          Length = 177433

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 291   agccactgaagccagccttg 310
             ||||||||||||||||||||
Sbjct: 58859 agccactgaagccagccttg 58840
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>gb|AC133650.4| Mus musculus BAC clone RP23-453B15 from 9, complete sequence
          Length = 170607

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 349    gcctctcgtcatcaccagca 368
              ||||||||||||||||||||
Sbjct: 127119 gcctctcgtcatcaccagca 127138
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>ref|NM_177911.2| Mus musculus transglutaminase 4 (prostate) (Tgm4), mRNA
          Length = 2768

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 349  gcctctcgtcatcaccagca 368
            ||||||||||||||||||||
Sbjct: 1831 gcctctcgtcatcaccagca 1850
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>emb|AL645736.9| Mouse DNA sequence from clone RP23-474J7 on chromosome 2, complete
             sequence
          Length = 98571

 Score = 40.1 bits (20), Expect = 5.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 293   ccactgaagccagccttggtgaag 316
             ||||||||||||| ||||||||||
Sbjct: 32627 ccactgaagccagacttggtgaag 32650


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,659,855
Number of Sequences: 3902068
Number of extensions: 3659855
Number of successful extensions: 88725
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88531
Number of HSP's gapped (non-prelim): 188
length of query: 394
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 372
effective length of database: 17,147,199,772
effective search space: 6378758315184
effective search space used: 6378758315184
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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