Clone Name | rbart49d06 |
---|---|
Clone Library Name | barley_pub |
>dbj|AK069018.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001I03, full insert sequence Length = 1014 Score = 212 bits (107), Expect = 8e-52 Identities = 226/267 (84%), Gaps = 9/267 (3%) Strand = Plus / Minus Query: 243 acagataaatcactggcctggtttgaatccattaactatggatgccccgttaattt---- 298 |||||| | ||| |||||||||||||| ||||||| ||| | |||||||||||||| Sbjct: 757 acagatgattcaatggcctggtttgaagccattaattataggtgccccgttaatttctgg 698 Query: 299 -----cacctctgttcttcttgacatatgcagtatattcaccgtactgcatggtgtacag 353 | ||||||||||||||||| || |||| |||||||| || ||||| ||||||| Sbjct: 697 tgcagctcctctgttcttcttgacgtaggcagcgtattcaccatagtgcatagtgtacaa 638 Query: 354 ggtactttggtagcgggtgacgcggattttcttcctcaaagactcagtgatggtgccatt 413 |||||| |||||||||||||| |||| ||||||||||||||| || || ||||| ||||| Sbjct: 637 ggtactctggtagcgggtgacacggagtttcttcctcaaagagtcggttatggtaccatt 578 Query: 414 gtagccggccttcctcatgagcgagtcaatagcctctagttgtgtccatccttcatgggc 473 ||| || ||||||||||| || |||||||| | |||||| |||||||||||||||||||| Sbjct: 577 gtaacctgccttcctcatcagtgagtcaatggtctctagatgtgtccatccttcatgggc 518 Query: 474 agcaacctcaggtaaatatgttccact 500 |||||||||||||||||| ||| |||| Sbjct: 517 agcaacctcaggtaaataagttgcact 491
>ref|NM_197850.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0003O19.6), mRNA Length = 746 Score = 210 bits (106), Expect = 3e-51 Identities = 216/254 (85%), Gaps = 9/254 (3%) Strand = Plus / Minus Query: 256 tggcctggtttgaatccattaactatggatgccccgttaattt---------cacctctg 306 |||||||||||||| ||||||| ||| | |||||||||||||| | |||||| Sbjct: 742 tggcctggtttgaagccattaattataggtgccccgttaatttctggtgcagctcctctg 683 Query: 307 ttcttcttgacatatgcagtatattcaccgtactgcatggtgtacagggtactttggtag 366 ||||||||||| || |||| |||||||| || ||||| ||||||| |||||| |||||| Sbjct: 682 ttcttcttgacgtaggcagcgtattcaccatagtgcatagtgtacaaggtactctggtag 623 Query: 367 cgggtgacgcggattttcttcctcaaagactcagtgatggtgccattgtagccggccttc 426 |||||||| |||| ||||||||||||||| || || ||||| |||||||| || |||||| Sbjct: 622 cgggtgacacggagtttcttcctcaaagagtcggttatggtaccattgtaacctgccttc 563 Query: 427 ctcatgagcgagtcaatagcctctagttgtgtccatccttcatgggcagcaacctcaggt 486 ||||| || |||||||| | |||||| ||||||||||||||||||||||||||||||||| Sbjct: 562 ctcatcagtgagtcaatggtctctagatgtgtccatccttcatgggcagcaacctcaggt 503 Query: 487 aaatatgttccact 500 ||||| ||| |||| Sbjct: 502 aaataagttgcact 489
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 159 bits (80), Expect = 1e-35 Identities = 193/232 (83%), Gaps = 9/232 (3%) Strand = Plus / Minus Query: 243 acagataaatcactggcctggtttgaatccattaactatggatgccccgttaattt---- 298 |||||| | ||| |||||||||||||| ||||||| ||| | |||||||||||||| Sbjct: 22236367 acagatgattcaatggcctggtttgaagccattaattataggtgccccgttaatttctgg 22236308 Query: 299 -----cacctctgttcttcttgacatatgcagtatattcaccgtactgcatggtgtacag 353 | ||||||||||||||||| || |||| |||||||| || ||||| ||||||| Sbjct: 22236307 tgcagctcctctgttcttcttgacgtaggcagcgtattcaccatagtgcatagtgtacaa 22236248 Query: 354 ggtactttggtagcgggtgacgcggattttcttcctcaaagactcagtgatggtgccatt 413 |||||| |||||||||||||| |||| ||||||||||||||| || || ||||| ||||| Sbjct: 22236247 ggtactctggtagcgggtgacacggagtttcttcctcaaagagtcggttatggtaccatt 22236188 Query: 414 gtagccggccttcctcatgagcgagtcaatagcctctagttgtgtccatcct 465 ||| || ||||||||||| || |||||||| | |||||| |||||||||||| Sbjct: 22236187 gtaacctgccttcctcatcagtgagtcaatggtctctagatgtgtccatcct 22236136 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 463 ccttcatgggcagcaacctcaggtaaatatgttccact 500 ||||||||||||||||||||||||||||| ||| |||| Sbjct: 22235676 ccttcatgggcagcaacctcaggtaaataagttgcact 22235639
>gb|AC060755.9|AC060755 Oryza sativa chromosome 10 BAC OSJNBa0003O19 genomic sequence, complete sequence Length = 172427 Score = 159 bits (80), Expect = 1e-35 Identities = 193/232 (83%), Gaps = 9/232 (3%) Strand = Plus / Minus Query: 243 acagataaatcactggcctggtttgaatccattaactatggatgccccgttaattt---- 298 |||||| | ||| |||||||||||||| ||||||| ||| | |||||||||||||| Sbjct: 53610 acagatgattcaatggcctggtttgaagccattaattataggtgccccgttaatttctgg 53551 Query: 299 -----cacctctgttcttcttgacatatgcagtatattcaccgtactgcatggtgtacag 353 | ||||||||||||||||| || |||| |||||||| || ||||| ||||||| Sbjct: 53550 tgcagctcctctgttcttcttgacgtaggcagcgtattcaccatagtgcatagtgtacaa 53491 Query: 354 ggtactttggtagcgggtgacgcggattttcttcctcaaagactcagtgatggtgccatt 413 |||||| |||||||||||||| |||| ||||||||||||||| || || ||||| ||||| Sbjct: 53490 ggtactctggtagcgggtgacacggagtttcttcctcaaagagtcggttatggtaccatt 53431 Query: 414 gtagccggccttcctcatgagcgagtcaatagcctctagttgtgtccatcct 465 ||| || ||||||||||| || |||||||| | |||||| |||||||||||| Sbjct: 53430 gtaacctgccttcctcatcagtgagtcaatggtctctagatgtgtccatcct 53379 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 463 ccttcatgggcagcaacctcaggtaaatatgttccact 500 ||||||||||||||||||||||||||||| ||| |||| Sbjct: 52919 ccttcatgggcagcaacctcaggtaaataagttgcact 52882
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 159 bits (80), Expect = 1e-35 Identities = 193/232 (83%), Gaps = 9/232 (3%) Strand = Plus / Minus Query: 243 acagataaatcactggcctggtttgaatccattaactatggatgccccgttaattt---- 298 |||||| | ||| |||||||||||||| ||||||| ||| | |||||||||||||| Sbjct: 22248435 acagatgattcaatggcctggtttgaagccattaattataggtgccccgttaatttctgg 22248376 Query: 299 -----cacctctgttcttcttgacatatgcagtatattcaccgtactgcatggtgtacag 353 | ||||||||||||||||| || |||| |||||||| || ||||| ||||||| Sbjct: 22248375 tgcagctcctctgttcttcttgacgtaggcagcgtattcaccatagtgcatagtgtacaa 22248316 Query: 354 ggtactttggtagcgggtgacgcggattttcttcctcaaagactcagtgatggtgccatt 413 |||||| |||||||||||||| |||| ||||||||||||||| || || ||||| ||||| Sbjct: 22248315 ggtactctggtagcgggtgacacggagtttcttcctcaaagagtcggttatggtaccatt 22248256 Query: 414 gtagccggccttcctcatgagcgagtcaatagcctctagttgtgtccatcct 465 ||| || ||||||||||| || |||||||| | |||||| |||||||||||| Sbjct: 22248255 gtaacctgccttcctcatcagtgagtcaatggtctctagatgtgtccatcct 22248204 Score = 60.0 bits (30), Expect = 8e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 463 ccttcatgggcagcaacctcaggtaaatatgttccact 500 ||||||||||||||||||||||||||||| ||| |||| Sbjct: 22247744 ccttcatgggcagcaacctcaggtaaataagttgcact 22247707
>emb|AJ271959.1|TCA271959 Theobroma cacao microsatellite DNA, clone mTcCIR61 Length = 456 Score = 46.1 bits (23), Expect = 0.11 Identities = 47/55 (85%) Strand = Plus / Plus Query: 463 ccttcatgggcagcaacctcaggtaaatatgttccactccgtcttacattatagt 517 |||||||| |||| ||||||||||||||||| |||| || |||| |||||||| Sbjct: 221 ccttcatgtgcaggcacctcaggtaaatatgtggcacttcgccttatattatagt 275
>gb|BC016181.1| Homo sapiens hypothetical protein MGC4268, mRNA (cDNA clone MGC:20482 IMAGE:4644159), complete cds Length = 4732 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 965 agcaacctcaggtaaatatgt 945
>gb|AC099035.2| Drosophila melanogaster clone BACR37H13, complete sequence Length = 175448 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaattcccacaccaattgct 203 ||||||||||||||||||||| Sbjct: 16967 caaattcccacaccaattgct 16987
>gb|BC078174.1| Homo sapiens hypothetical protein MGC4268, mRNA (cDNA clone MGC:88063 IMAGE:6012672), complete cds Length = 4676 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 975 agcaacctcaggtaaatatgt 955
>ref|NM_153515.2| Mus musculus RIKEN cDNA E230022H04 gene (E230022H04Rik), mRNA Length = 3391 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1178 agcaacctcaggtaaatatgt 1158
>gb|AC131316.8| Mus musculus chromosome 1, clone RP23-302H1, complete sequence Length = 237076 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 165 agaactgatttttccaaacaa 185 ||||||||||||||||||||| Sbjct: 130430 agaactgatttttccaaacaa 130410
>gb|BC034661.1| Mus musculus RIKEN cDNA E230022H04 gene, mRNA (cDNA clone MGC:32132 IMAGE:5137474), complete cds Length = 3181 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 975 agcaacctcaggtaaatatgt 955
>ref|XM_852694.1| PREDICTED: Canis familiaris similar to CG5902-PA, isoform A, transcript variant 4 (LOC483862), mRNA Length = 912 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 693 agcaacctcaggtaaatatgt 673
>ref|XM_540982.2| PREDICTED: Canis familiaris similar to CG5902-PA, isoform A, transcript variant 1 (LOC483862), mRNA Length = 1309 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 804 agcaacctcaggtaaatatgt 784
>ref|XM_843911.1| PREDICTED: Canis familiaris similar to CG5902-PA, isoform A, transcript variant 2 (LOC483862), mRNA Length = 1458 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 953 agcaacctcaggtaaatatgt 933
>gb|AC124393.5| Mus musculus BAC clone RP24-331E1 from chromosome 18, complete sequence Length = 171769 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 103948 agcaacctcaggtaaatatgt 103928
>gb|BC012310.1| Mus musculus RIKEN cDNA E230022H04 gene, mRNA (cDNA clone IMAGE:3500900), with apparent retained intron Length = 3174 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 839 agcaacctcaggtaaatatgt 819
>gb|AC121605.3| Mus musculus BAC clone RP23-312E16 from 1, complete sequence Length = 196494 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 173012 agcaacctcaggtaaatatgt 172992
>gb|AC161511.3| Mus musculus chromosome 18, clone RP23-37O16, complete sequence Length = 186860 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 51941 agcaacctcaggtaaatatgt 51961
>gb|AC159096.2| Mus musculus chromosome 1, clone RP24-95N15, complete sequence Length = 189668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 5667 agcaacctcaggtaaatatgt 5687
>emb|CR857850.1| Pongo pygmaeus mRNA; cDNA DKFZp468L1210 (from clone DKFZp468L1210) Length = 3482 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 958 agcaacctcaggtaaatatgt 938
>gb|BC056948.1| Mus musculus RIKEN cDNA E230022H04 gene, mRNA (cDNA clone MGC:66664 IMAGE:6827318), complete cds Length = 3391 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1178 agcaacctcaggtaaatatgt 1158
>ref|NM_031445.2| Homo sapiens hypothetical protein MGC4268 (MGC4268), mRNA Length = 4698 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 965 agcaacctcaggtaaatatgt 945
>dbj|AK095871.1| Homo sapiens cDNA FLJ38552 fis, clone HCHON2002241 Length = 2307 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 50 agcaacctcaggtaaatatgt 30
>dbj|AK133018.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930554M16 product:weakly similar to AMME syndrome candidate gene 1 protein [Homo sapiens], full insert sequence Length = 2765 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1436 agcaacctcaggtaaatatgt 1416
>dbj|AK151060.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830022F14 product:hypothetical protein, full insert sequence Length = 3432 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1242 agcaacctcaggtaaatatgt 1222
>dbj|AK151257.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched library, clone:I830027F03 product:weakly similar to AMME syndrome candidate gene 1 protein [Homo sapiens], full insert sequence Length = 3333 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1142 agcaacctcaggtaaatatgt 1122
>gb|AY864330.1| Chrysodeixis chalcites nucleopolyhedrovirus, complete genome Length = 149622 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 3 acaacttaaatcaattaattt 23 ||||||||||||||||||||| Sbjct: 111352 acaacttaaatcaattaattt 111332
>dbj|AK054131.1| Mus musculus 2 days pregnant adult female oviduct cDNA, RIKEN full-length enriched library, clone:E230022H04 product:weakly similar to AMMECR1 PROTEIN [Homo sapiens], full insert sequence Length = 2690 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1233 agcaacctcaggtaaatatgt 1213
>dbj|AK030009.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4932415E21 product:weakly similar to AMMECR1 PROTEIN [Homo sapiens], full insert sequence Length = 2899 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1442 agcaacctcaggtaaatatgt 1422
>emb|BX682549.8| Zebrafish DNA sequence from clone CH211-193L17 in linkage group 20, complete sequence Length = 151560 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 aattataaataattatattac 233 ||||||||||||||||||||| Sbjct: 469 aattataaataattatattac 449
>gb|AC008351.4|AC008351 Drosophila melanogaster, chromosome 2R, region 59A-59C, BAC clone BACR09K23, complete sequence Length = 191438 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaattcccacaccaattgct 203 ||||||||||||||||||||| Sbjct: 158421 caaattcccacaccaattgct 158441
>emb|BX005421.6| Zebrafish DNA sequence from clone DKEY-36H5, complete sequence Length = 161727 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 212 aaattataaataattatatta 232 ||||||||||||||||||||| Sbjct: 81269 aaattataaataattatatta 81289
>gb|AC012306.11| Homo sapiens BAC clone RP11-395A13 from 2, complete sequence Length = 153617 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 18664 agcaacctcaggtaaatatgt 18684
>ref|XM_240915.3| PREDICTED: Rattus norvegicus similar to hypothetical protein MGC32132 (predicted) (LOC307526), mRNA Length = 3625 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 1428 agcaacctcaggtaaatatgt 1408
>gb|AC101703.11| Mus musculus chromosome 1, clone RP23-248B15, complete sequence Length = 208984 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 474 agcaacctcaggtaaatatgt 494 ||||||||||||||||||||| Sbjct: 2704 agcaacctcaggtaaatatgt 2684
>emb|BX530723.8| Zebrafish DNA sequence from clone DKEYP-119B4 in linkage group 20, complete sequence Length = 119735 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 213 aattataaataattatattac 233 ||||||||||||||||||||| Sbjct: 87096 aattataaataattatattac 87076
>gb|AC007052.4|AC007052 Homo sapiens chromosome 18, clone hRPK.411_H_24, complete sequence Length = 179726 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 5 aacttaaatcaattaatttca 25 ||||||||||||||||||||| Sbjct: 165231 aacttaaatcaattaatttca 165251
>gb|AC005650.1|AC005650 Drosophila melanogaster, chromosome 2R, region 59B4-59B7, P1 clone DS02885, complete sequence Length = 60019 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 183 caaattcccacaccaattgct 203 ||||||||||||||||||||| Sbjct: 24705 caaattcccacaccaattgct 24685
>gb|AE003459.3| Drosophila melanogaster chromosome 2R, section 67 of 73 of the complete sequence Length = 283700 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 183 caaattcccacaccaattgct 203 ||||||||||||||||||||| Sbjct: 19450 caaattcccacaccaattgct 19470
>gb|AC016023.8| Drosophila melanogaster clone BACR16F16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aaattataaataattatatt 231 |||||||||||||||||||| Sbjct: 91049 aaattataaataattatatt 91068
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tataaataattatattacctgcta 239 |||||||||||||| ||||||||| Sbjct: 524105 tataaataattatactacctgcta 524082
>ref|XM_722210.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY06623) partial mRNA Length = 3470 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aaattataaataattatatt 231 |||||||||||||||||||| Sbjct: 1564 aaattataaataattatatt 1583
>emb|AJ011856.1|SCE011856 Saccharomyces cerevisiae complete mitochondrial genome Length = 85779 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 24314 aattataaataattatatta 24333
>emb|AL390960.20| Human DNA sequence from clone RP1-9B16 on chromosome 6 Contains MYCT1 gene encoding myc target 1 protein and a pseudogene similar to part of heat shock 60kD protein 1 (chaperonin) (HSPD1), complete sequence Length = 87637 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 actgatttttccaaacaaat 187 |||||||||||||||||||| Sbjct: 13653 actgatttttccaaacaaat 13672
>emb|AL365494.17| Human DNA sequence from clone RP11-317B10 on chromosome 9 Contains the 3' end of the SARDH gene for sarcosine dehydrogenase (SAR, SDH, SARD, DMGDHL1), the DBH gene for dopamine beta-hydroxylase (dopamine beta-monooxygenase) and a novel gene, complete sequence Length = 53242 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 253 cactggcctggtttgaatcc 272 |||||||||||||||||||| Sbjct: 44651 cactggcctggtttgaatcc 44670
>gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 146502 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 247 ataaatcactggcctggttt 266 |||||||||||||||||||| Sbjct: 75588 ataaatcactggcctggttt 75569
>emb|CR388369.8| Zebrafish DNA sequence from clone CH211-207N23 in linkage group 15, complete sequence Length = 139575 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 aaattataaataattatatt 231 |||||||||||||||||||| Sbjct: 70403 aaattataaataattatatt 70384
>emb|AL009192.1|DMC133E12 Drosophila melanogaster cosmid clone 133E12 Length = 32000 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tataaataattatattacct 235 |||||||||||||||||||| Sbjct: 3399 tataaataattatattacct 3418
>emb|CR762496.7| Zebrafish DNA sequence from clone DKEY-212J2 in linkage group 21, complete sequence Length = 239780 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 110351 aattataaataattatatta 110370
>emb|CR339041.7| Zebrafish DNA sequence from clone CH211-147G22, complete sequence Length = 161478 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aacttaaatcaattaatttc 24 |||||||||||||||||||| Sbjct: 9209 aacttaaatcaattaatttc 9228
>emb|BX572619.12| Zebrafish DNA sequence from clone DKEY-167J6 in linkage group 12, complete sequence Length = 171026 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 aacttaaatcaattaatttc 24 |||||||||||||||||||| Sbjct: 110305 aacttaaatcaattaatttc 110286
>emb|BX571829.7| Zebrafish DNA sequence from clone DKEY-256M7 in linkage group 12, complete sequence Length = 196942 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 aaattataaataattatatt 231 |||||||||||||||||||| Sbjct: 89633 aaattataaataattatatt 89614
>gb|AC010025.6| Drosophila melanogaster 3L BAC RPCI98-20B1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 175679 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agccaaattataaataatta 227 |||||||||||||||||||| Sbjct: 132903 agccaaattataaataatta 132884
>gb|AC011846.16| Homo sapiens chromosome 15, clone RP11-346A8, complete sequence Length = 147760 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 acttaaatcaattaatttca 25 |||||||||||||||||||| Sbjct: 31570 acttaaatcaattaatttca 31589
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tataaataattatattacct 235 |||||||||||||||||||| Sbjct: 116936 tataaataattatattacct 116955
>gb|AC105129.4| Homo sapiens chromosome 15, clone RP11-349G13, complete sequence Length = 198295 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 acttaaatcaattaatttca 25 |||||||||||||||||||| Sbjct: 43300 acttaaatcaattaatttca 43281
>gb|AC011118.13| Homo sapiens chromosome 8, clone RP11-163D8, complete sequence Length = 135968 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aagactcagtgatggtgcca 411 |||||||||||||||||||| Sbjct: 109554 aagactcagtgatggtgcca 109535
>gb|AC090627.4| Homo sapiens chromosome 17, clone CTD-2365J3, complete sequence Length = 136843 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 268 aatccattaactatggatgc 287 |||||||||||||||||||| Sbjct: 37390 aatccattaactatggatgc 37371
>gb|L36897.1|YSCMTCG13 Saccharomyces cerevisiae mitochondrion oxi3 gene, aapI gene, oli2 gene, ORF4, replication of origin (ori7 and ori2), and ORF5 Length = 21153 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 10654 aattataaataattatatta 10673
>gb|AC093546.2| Drosophila melanogaster 3L BAC RP98-8G7 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 207761 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agccaaattataaataatta 227 |||||||||||||||||||| Sbjct: 24733 agccaaattataaataatta 24714
>ref|XM_701656.1| PREDICTED: Danio rerio similar to SET translocation (myeloid leukemia-associated) A, transcript variant 3 (LOC557530), mRNA Length = 1845 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 1637 tcaaagactcagtgatggtg 1618
>ref|XM_677799.1| PREDICTED: Danio rerio similar to SET translocation (myeloid leukemia-associated) A, transcript variant 1 (LOC557530), mRNA Length = 1827 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 1619 tcaaagactcagtgatggtg 1600
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 216 tataaataattatattacctgcta 239 |||||||||||||| ||||||||| Sbjct: 524103 tataaataattatactacctgcta 524080
>emb|BX649390.12| Zebrafish DNA sequence from clone DKEY-261L2 in linkage group 2, complete sequence Length = 184594 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 45445 aattataaataattatatta 45464
>emb|BX088526.6| Zebrafish DNA sequence from clone CH211-51H9 in linkage group 8, complete sequence Length = 187161 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 59405 tcaaagactcagtgatggtg 59424
>ref|NM_201475.1| Danio rerio SET translocation (myeloid leukemia-associated) A (seta), mRNA Length = 1715 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 1602 tcaaagactcagtgatggtg 1583
>gb|CP000252.1| Syntrophus aciditrophicus SB, complete genome Length = 3179300 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 365 agcgggtgacgcggattttc 384 |||||||||||||||||||| Sbjct: 2352863 agcgggtgacgcggattttc 2352882
>gb|AF250284.1|AF250284 Amsacta moorei entomopoxvirus, complete genome Length = 232392 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 caaattataaataattatat 230 |||||||||||||||||||| Sbjct: 15508 caaattataaataattatat 15527
>emb|BX004792.8| Zebrafish DNA sequence from clone DKEY-1J19, complete sequence Length = 206371 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 70089 aattataaataattatatta 70070
>emb|AJ515536.1|AHI515536 Antirrhinum hispanicum slf-S5 gene for S locus F-box (SLF)-S5 protein and slf-S5A gene for S locus F-box (SLF)-S5A protein Length = 71543 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 7883 aattataaataattatatta 7902
>emb|AJ515534.1|AHI515534 Antirrhinum hispanicum slf-S4D, slf-S4A and slf-S4 genes Length = 54556 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 6412 aattataaataattatatta 6431
>emb|CR381630.12| Zebrafish DNA sequence from clone CH211-234G24 in linkage group 18, complete sequence Length = 152854 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 caaattataaataattatat 230 |||||||||||||||||||| Sbjct: 64723 caaattataaataattatat 64704
>emb|BX649231.4| Zebrafish DNA sequence from clone DKEY-225H23 in linkage group 20, complete sequence Length = 153569 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 aagccaaattataaataatt 226 |||||||||||||||||||| Sbjct: 17305 aagccaaattataaataatt 17286
>gb|BC046082.1| Danio rerio SET translocation (myeloid leukemia-associated) A, mRNA (cDNA clone MGC:56333 IMAGE:5603762), complete cds Length = 1715 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 1602 tcaaagactcagtgatggtg 1583
>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete sequence Length = 256818 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 212 aaattataaataattatatt 231 |||||||||||||||||||| Sbjct: 23408 aaattataaataattatatt 23427
>gb|AE003539.3| Drosophila melanogaster chromosome 3L, section 46 of 83 of the complete sequence Length = 272016 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 agccaaattataaataatta 227 |||||||||||||||||||| Sbjct: 52667 agccaaattataaataatta 52648
>gb|AE003422.2| Drosophila melanogaster chromosome X, section 6 of 74 of the complete sequence Length = 300933 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 216 tataaataattatattacct 235 |||||||||||||||||||| Sbjct: 243913 tataaataattatattacct 243932
>gb|AF071568.1|AF071568 Danio rerio homeobox transcription factor (hoxb2a) mRNA, complete cds Length = 1714 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 tcaaagactcagtgatggtg 408 |||||||||||||||||||| Sbjct: 1502 tcaaagactcagtgatggtg 1483
>emb|BX294163.7| Zebrafish DNA sequence from clone DKEY-46D17 in linkage group 20, complete sequence Length = 115103 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 79143 aattataaataattatatta 79162
>gb|AC000404.1|AC000404 Genomic sequence from Human 9q34, complete sequence Length = 46651 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 253 cactggcctggtttgaatcc 272 |||||||||||||||||||| Sbjct: 17217 cactggcctggtttgaatcc 17198
>emb|AL928846.4| Human DNA sequence from clone RP11-9I7 on chromosome 9, complete sequence Length = 146621 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 392 aagactcagtgatggtgcca 411 |||||||||||||||||||| Sbjct: 19790 aagactcagtgatggtgcca 19771
>gb|J01477.1|YSCMTCOC1 Yeast (S.cerevisiae) mitochondrial cox1 gene for cytochrome c oxidase subunit 1, ORF-containing IVS Length = 3544 Score = 40.1 bits (20), Expect = 7.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 aattataaataattatatta 232 |||||||||||||||||||| Sbjct: 2360 aattataaataattatatta 2379
>gb|AC105733.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0043C10, complete sequence Length = 108688 Score = 40.1 bits (20), Expect = 7.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 216 tataaataattatattacctgcta 239 |||||||||||||| ||||||||| Sbjct: 91813 tataaataattatactacctgcta 91836 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,603,053 Number of Sequences: 3902068 Number of extensions: 5603053 Number of successful extensions: 113864 Number of sequences better than 10.0: 84 Number of HSP's better than 10.0 without gapping: 84 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 113532 Number of HSP's gapped (non-prelim): 332 length of query: 517 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 494 effective length of database: 17,143,297,704 effective search space: 8468789065776 effective search space used: 8468789065776 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)