ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart49d05 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ628169.1| Hordeum vulgare bci3 gene for putative acid phosphatase Length = 2748 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 2618 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 2559 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 2558 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 2499 Query: 346 gcttctgcctctcgccggacttgtaggtcaccgcagagcccttgaacccgggttgcttca 405 |||||| ||||||| |||||||||||| | || |||||||||||||| ||||||| | Sbjct: 2498 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 2439 Query: 406 gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 465 || ||| |||||||||| |||| ||||||| ||||||||| |||||||| ||||| Sbjct: 2438 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 2379 Query: 466 tct 468 ||| Sbjct: 2378 tct 2376
>emb|AJ250282.2|HVU250282 Hordeum vulgare partial mRNA for putative acid phosphatase (bci-3 gene) Length = 1152 Score = 212 bits (107), Expect = 8e-52 Identities = 209/243 (86%) Strand = Plus / Minus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 ||||| ||||||||||||||||||| ||| | |||||||||| || ||||| ||||||| Sbjct: 1022 cctaggcgatgtagtacatggggtcaggccggctgaaggtgcgagcgccctcgggcgcgc 963 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 ||||||||||||||||||||||||||||||| ||||||||||| |||||||| |||| || Sbjct: 962 cgaggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcatcctcca 903 Query: 346 gcttctgcctctcgccggacttgtaggtcaccgcagagcccttgaacccgggttgcttca 405 |||||| ||||||| |||||||||||| | || |||||||||||||| ||||||| | Sbjct: 902 gcttcttcctctcggcggacttgtaggatatggcggagcccttgaacccatgttgcttga 843 Query: 406 gcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtgatggccc 465 || ||| |||||||||| |||| ||||||| ||||||||| |||||||| ||||| Sbjct: 842 gcgtcaggctcatccacccggagaagccctggctgcggaggttcccgacggtgacggccc 783 Query: 466 tct 468 ||| Sbjct: 782 tct 780
>gb|AY106317.1| Zea mays PCO101473 mRNA sequence Length = 827 Score = 192 bits (97), Expect = 7e-46 Identities = 133/145 (91%) Strand = Plus / Minus Query: 228 tagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccg 287 ||||| |||||||| | |||||| ||||||||||||||||| || ||||| ||||||||| Sbjct: 541 tagccaatgtagtagagggggtcaggcagcttgaaggtgcgcgcgccctccggcgcgccg 482 Query: 288 aggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagc 347 ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| ||| Sbjct: 481 aggatgtcgctccactggtcgccgatgttgccgacgatgacgtacccggcgtcctggagc 422 Query: 348 ttctgcctctcgccggacttgtagg 372 ||||| | ||||||||||||||||| Sbjct: 421 ttctggcgctcgccggacttgtagg 397 Score = 89.7 bits (45), Expect = 8e-15 Identities = 45/45 (100%) Strand = Plus / Minus Query: 431 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 338 cccctggcggcggaggttggtgacggtgatggccctctggtcctc 294
>gb|AC145271.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1140B01, complete sequence Length = 135184 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 89814 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 89873 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 89874 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 89933 Query: 346 gcttctgcctctcgccggacttg 368 ||||||||| ||||||||||||| Sbjct: 89934 gcttctgccgctcgccggacttg 89956 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 234 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 293 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 80220 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 80279 Query: 294 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 353 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 80280 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 80339 Query: 354 ctctcgccggacttgta 370 | ||||||||||||||| Sbjct: 80340 cgctcgccggacttgta 80356 Score = 157 bits (79), Expect = 4e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 90313 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 90372 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 90373 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 90432 Query: 346 gcttctgcctctcgccggacttg 368 ||||||||| ||||||||||||| Sbjct: 90433 gcttctgccgctcgccggacttg 90455 Score = 129 bits (65), Expect = 9e-27 Identities = 125/145 (86%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 104198 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 104257 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 104258 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 104317 Query: 346 gcttctgcctctcgccggacttgta 370 |||| |||| ||||||||||||||| Sbjct: 104318 gcttttgccgctcgccggacttgta 104342 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5307 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5360 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 104419 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 104462 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 400 gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 459 |||| ||||| || ||||||||||| ||| ||||| ||||| ||||| |||||||||| Sbjct: 90502 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 90561 Query: 460 tg 461 || Sbjct: 90562 tg 90563 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 419 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 472 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 80420 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 80473
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 165 bits (83), Expect = 2e-37 Identities = 128/143 (89%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5556605 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5556664 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||||||||||||||| |||||||||||||||||| | ||||| |||| || Sbjct: 5556665 cgaggatgtcgctccactggtcaccgatgttaccgacgatggtgaaaccggcatcctcca 5556724 Query: 346 gcttctgcctctcgccggacttg 368 ||||||||| ||||||||||||| Sbjct: 5556725 gcttctgccgctcgccggacttg 5556747 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Plus Query: 234 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 293 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 5547011 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 5547070 Query: 294 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 353 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 5547071 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 5547130 Query: 354 ctctcgccggacttgta 370 | ||||||||||||||| Sbjct: 5547131 cgctcgccggacttgta 5547147 Score = 157 bits (79), Expect = 4e-35 Identities = 127/143 (88%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 |||||||||||||||||| |||||| |||| ||||||||||||||| ||||| ||||| | Sbjct: 5557104 cctagccgatgtagtacagggggtcaggcaacttgaaggtgcgggcgccctccggcgcac 5557163 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||||||||||||||| |||||||||||||| ||| | ||||| |||| || Sbjct: 5557164 cgaggatgtcgctccactggtcaccgatgttaccgacaatggtgaaaccggcatcctcca 5557223 Query: 346 gcttctgcctctcgccggacttg 368 ||||||||| ||||||||||||| Sbjct: 5557224 gcttctgccgctcgccggacttg 5557246 Score = 129 bits (65), Expect = 9e-27 Identities = 125/145 (86%) Strand = Plus / Plus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 5570989 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 5571048 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 5571049 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 5571108 Query: 346 gcttctgcctctcgccggacttgta 370 |||| |||| ||||||||||||||| Sbjct: 5571109 gcttttgccgctcgccggacttgta 5571133 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 314 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 5399395 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 5399454 Query: 315 ttaccgacgatgacata 331 |||||||| ||| |||| Sbjct: 5399455 ttaccgacaatggcata 5399471 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 5472098 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 5472151 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 5416590 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 5416649 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 5416650 ttccactggtcgccaatgttgccgacgatga 5416680 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 287 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 337 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 5452349 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 5452399 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 316 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 5459713 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 5459756 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 5571210 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 5571253 Score = 44.1 bits (22), Expect = 0.41 Identities = 52/62 (83%) Strand = Plus / Plus Query: 400 gcttcagcaagaggttcatccacccagagatcccctggcggcggaggttggtgacggtga 459 |||| ||||| || ||||||||||| ||| ||||| ||||| ||||| |||||||||| Sbjct: 5557293 gcttgagcaacagcttcatccacccggagtatccctgccggcgaaggtttgtgacggtga 5557352 Query: 460 tg 461 || Sbjct: 5557353 tg 5557354 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Plus Query: 419 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 472 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 5547211 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 5547264 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gtcgctccactggtcgccgatgttaccga 321 ||||||||||||||| |||||||| |||| Sbjct: 5428951 gtcgctccactggtcaccgatgttgccga 5428979
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 221 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 280 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 16055858 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 16055799 Query: 281 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 340 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 16055798 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 16055739 Query: 341 ctgcagcttctgcctctcgccggacttgta 370 |||||||||||| | ||||||||||||||| Sbjct: 16055738 ctgcagcttctgacgctcgccggacttgta 16055709 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 16055632 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 16055589 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 25973349 ttctgcctctcgccggactt 25973330 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 25938072 ttctgcctctcgccggactt 25938091
>dbj|AP005256.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0038F09 Length = 166568 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 221 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 280 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 26191 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 26132 Query: 281 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 340 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 26131 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 26072 Query: 341 ctgcagcttctgcctctcgccggacttgta 370 |||||||||||| | ||||||||||||||| Sbjct: 26071 ctgcagcttctgacgctcgccggacttgta 26042 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 25965 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 25922
>dbj|AP005642.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0040K22 Length = 155832 Score = 163 bits (82), Expect = 6e-37 Identities = 133/150 (88%) Strand = Plus / Minus Query: 221 ggcggcctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctgg 280 |||| ||||||||||||||||||||||||| ||||||||||||||||| || ||||| || Sbjct: 137260 ggcgacctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccgg 137201 Query: 281 cgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtc 340 || || | |||||| ||||||||||| ||||||||||||||||||| | |||||||| Sbjct: 137200 tgcacccaagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtc 137141 Query: 341 ctgcagcttctgcctctcgccggacttgta 370 |||||||||||| | ||||||||||||||| Sbjct: 137140 ctgcagcttctgacgctcgccggacttgta 137111 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 137034 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 136991
>dbj|AK059825.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-F04, full insert sequence Length = 1076 Score = 161 bits (81), Expect = 3e-36 Identities = 123/137 (89%) Strand = Plus / Minus Query: 234 atgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatg 293 |||||||| | |||||| |||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 903 atgtagtataaggggtcaggcagcttgaaggtgcgggcgccctccggcgcgccgaggatg 844 Query: 294 tcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcagcttctgc 353 || ||||||||||| |||||||| |||||||||| | || |||||||||||||||||| Sbjct: 843 tcactccactggtcaccgatgttcccgacgatgatgaagccagcgtcctgcagcttctgc 784 Query: 354 ctctcgccggacttgta 370 | ||||||||||||||| Sbjct: 783 cgctcgccggacttgta 767 Score = 44.1 bits (22), Expect = 0.41 Identities = 46/54 (85%) Strand = Plus / Minus Query: 419 ccacccagagatcccctggcggcggaggttggtgacggtgatggccctctggtc 472 |||||| |||| ||||| ||| ||||||| ||||||||||||| ||| ||||| Sbjct: 703 ccacccggagaatccctgtcggtggaggttcgtgacggtgatggtcctttggtc 650
>ref|XM_477966.1| Oryza sativa (japonica cultivar-group), mRNA Length = 411 Score = 159 bits (80), Expect = 1e-35 Identities = 128/144 (88%) Strand = Plus / Minus Query: 227 ctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgcc 286 |||||||||||||||||||||||| ||||||||||||||||| || ||||| || || || Sbjct: 411 ctagccgatgtagtacatggggtcaggcagcttgaaggtgcgagcgccctccggtgcacc 352 Query: 287 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgcag 346 | |||||| ||||||||||| ||||||||||||||||||| | |||||||||||||| Sbjct: 351 caagatgtcactccactggtctccgatgttaccgacgatgatgaagccggcgtcctgcag 292 Query: 347 cttctgcctctcgccggacttgta 370 |||||| | ||||||||||||||| Sbjct: 291 cttctgacgctcgccggacttgta 268 Score = 63.9 bits (32), Expect = 4e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| | |||||||||||||||||||||||| Sbjct: 191 ccctgccggcggaggttcgcgacggtgatggccctctggtcctc 148
>dbj|AK061404.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-A01, full insert sequence Length = 1131 Score = 129 bits (65), Expect = 9e-27 Identities = 125/145 (86%) Strand = Plus / Minus Query: 226 cctagccgatgtagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgc 285 ||||||||||||||||||||||||| |||||||||||||||||||| ||||| || | | Sbjct: 885 cctagccgatgtagtacatggggtccggcagcttgaaggtgcgggcgccctccggtgtac 826 Query: 286 cgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcgtcctgca 345 |||||||||| ||||| ||||| || |||||||||| |||| | ||||| |||| || Sbjct: 825 cgaggatgtcactccattggtcaccaatgttaccgaggatggtgaaaccggcatcctcca 766 Query: 346 gcttctgcctctcgccggacttgta 370 |||| |||| ||||||||||||||| Sbjct: 765 gcttttgccgctcgccggacttgta 741 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 432 ccctggcggcggaggttggtgacggtgatggccctctggtcctc 475 ||||| ||||||||||| |||||||||||| ||| |||||||| Sbjct: 664 ccctgccggcggaggtttgtgacggtgatgttcctttggtcctc 621
>dbj|AK119190.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-H02, full insert sequence Length = 1112 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK106112.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-D12, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104355.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H04, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104267.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H12, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104252.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-A07, full insert sequence Length = 1040 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK104180.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-H06, full insert sequence Length = 1012 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>dbj|AK061507.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F05, full insert sequence Length = 1105 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Minus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 750 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 691 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 690 ccggcgtccacaagcttctgcc 669
>gb|AC152973.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0076M01, complete sequence Length = 36050 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 32795 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 32854 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 32855 ccggcgtccacaagcttctgcc 32876 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 287 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 337 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 6680 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 6730 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 316 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 14044 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 14087
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 99.6 bits (50), Expect = 8e-18 Identities = 74/82 (90%) Strand = Plus / Plus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatac 332 ||||| |||| ||||||||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 6415 ccctccggcgagccgaggatgtcggtccactggtcgccgatgttgccgacgatgacatag 6474 Query: 333 ccggcgtcctgcagcttctgcc 354 ||||||||| |||||||||| Sbjct: 6475 ccggcgtccacaagcttctgcc 6496 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Plus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 25538 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 25591
>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10, complete sequence Length = 153366 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 314 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 86069 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 86128 Query: 315 ttaccgacgatgacata 331 |||||||| ||| |||| Sbjct: 86129 ttaccgacaatggcata 86145 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 103264 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 103323 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 103324 ttccactggtcgccaatgttgccgacgatga 103354 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Plus Query: 287 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 337 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 139023 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 139073 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 273 ccctctggcgcgccgaggatgtcgctccactggtcgccgatgtt 316 ||||||||| | |||||||||| |||||||||||| |||||||| Sbjct: 146387 ccctctggccctccgaggatgttgctccactggtcaccgatgtt 146430 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 293 gtcgctccactggtcgccgatgttaccga 321 ||||||||||||||| |||||||| |||| Sbjct: 115625 gtcgctccactggtcaccgatgttgccga 115653
>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10, complete sequence Length = 102275 Score = 81.8 bits (41), Expect = 2e-12 Identities = 68/77 (88%) Strand = Plus / Plus Query: 255 agcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactggtcgccgatg 314 ||||||||||||||||| ||| | | || |||||||| ||||||||||||||| |||||| Sbjct: 84909 agcttgaaggtgcgggctcccgccgccgggccgaggaggtcgctccactggtcaccgatg 84968 Query: 315 ttaccgacgatgacata 331 |||||||| ||| |||| Sbjct: 84969 ttaccgacaatggcata 84985 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Plus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 102104 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 102163 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 102164 ttccactggtcgccaatgttgccgacgatga 102194
>dbj|AK109335.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C11, full insert sequence Length = 1168 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-D05, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104460.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-B10, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104246.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-E04, full insert sequence Length = 1081 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK060968.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-C05, full insert sequence Length = 1096 Score = 75.8 bits (38), Expect = 1e-10 Identities = 50/54 (92%) Strand = Plus / Minus Query: 285 ccgaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggcg 338 |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||| Sbjct: 786 ccgaggatatcgctccattggtcaccgatgttaccgacgatgacatagccggcg 733
>dbj|AK104624.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A08, full insert sequence Length = 1051 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 794 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 735 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 734 ttccactggtcgccaatgttgccgacgatga 704
>dbj|AK104203.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-C10, full insert sequence Length = 1053 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 796 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 737 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 736 ttccactggtcgccaatgttgccgacgatga 706
>dbj|AK067327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013099D13, full insert sequence Length = 1059 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 802 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 743 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 742 ttccactggtcgccaatgttgccgacgatga 712
>dbj|AK060874.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-A01, full insert sequence Length = 1074 Score = 69.9 bits (35), Expect = 7e-09 Identities = 77/91 (84%) Strand = Plus / Minus Query: 237 tagtacatggggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcg 296 ||||||||||||| ||| | ||| ||||||||| ||| || |||| || | |||||||| Sbjct: 795 tagtacatggggttggggaacttaaaggtgcggcaaccatccggcgagcggcggatgtcg 736 Query: 297 ctccactggtcgccgatgttaccgacgatga 327 ||||||||||||| ||||| |||||||||| Sbjct: 735 ttccactggtcgccaatgttgccgacgatga 705
>ref|NM_189664.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 912 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 821 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 762 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 761 tcgccgatgttgccga 746
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 4871431 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 4871490 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 4871491 tcgccgatgttgccga 4871506
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Plus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 116080 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 116139 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 116140 tcgccgatgttgccga 116155
>dbj|AK109404.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-E06, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK104471.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D10, full insert sequence Length = 1094 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 843 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 784 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 783 tcgccgatgttgccga 768
>dbj|AK104183.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C11, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK100363.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083N07, full insert sequence Length = 1308 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 1057 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 998 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 997 tcgccgatgttgccga 982
>dbj|AK061466.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-C05, full insert sequence Length = 1095 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK060964.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-B05, full insert sequence Length = 1114 Score = 63.9 bits (32), Expect = 4e-07 Identities = 65/76 (85%) Strand = Plus / Minus Query: 246 gggtcgggcagcttgaaggtgcgggcaccctctggcgcgccgaggatgtcgctccactgg 305 |||| ||||||||||||||| ||| ||||| |||| ||| || | ||||||||||||| Sbjct: 844 gggttgggcagcttgaaggtccggcggccctccggcgagcccagcaggtcgctccactgg 785 Query: 306 tcgccgatgttaccga 321 ||||||||||| |||| Sbjct: 784 tcgccgatgttgccga 769
>dbj|AK061489.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-B02, full insert sequence Length = 1100 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 287 gaggatgtcgctccactggtcgccgatgttaccgacgatgacatacccggc 337 ||||||||||||||||||||| |||||||| |||| |||||||| ||||| Sbjct: 760 gaggatgtcgctccactggtcaccgatgttgccgataatgacatagccggc 710
>gb|AC107806.10| Mus musculus chromosome 3, clone RP23-55C1, complete sequence Length = 214411 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 2 gagcaaaaagaaaaacaacata 23 |||||||||||||||||||||| Sbjct: 55214 gagcaaaaagaaaaacaacata 55193
>emb|AL138920.11| Human DNA sequence from clone RP11-148B2 on chromosome 10 Contains the RAB18 gene for RAB18, member RAS oncogene family and a CpG island, complete sequence Length = 168217 Score = 44.1 bits (22), Expect = 0.41 Identities = 25/26 (96%) Strand = Plus / Plus Query: 8 aaagaaaaacaacataacaaagatcc 33 |||||||||||||| ||||||||||| Sbjct: 164948 aaagaaaaacaacaaaacaaagatcc 164973
>ref|XM_366443.1| Magnaporthe grisea 70-15 hypothetical protein (MG10661.4) partial mRNA Length = 840 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Minus Query: 284 gccgaggatgtcgctccactggtcgccgatgtt 316 ||||| || ||||||||||||| |||||||||| Sbjct: 696 gccgaagaagtcgctccactgggcgccgatgtt 664
>ref|XM_648771.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (70.t00013) partial mRNA Length = 825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aaagaaaaacaacataacaaa 28 ||||||||||||||||||||| Sbjct: 692 aaagaaaaacaacataacaaa 672
>ref|XM_645138.1| Entamoeba histolytica HM-1:IMSS predicted protein (234.t00012) partial mRNA Length = 939 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 8 aaagaaaaacaacataacaaa 28 ||||||||||||||||||||| Sbjct: 692 aaagaaaaacaacataacaaa 672
>emb|AL365260.11| Human DNA sequence from clone RP11-433J22 on chromosome 1 Contains the GJA5 gene for gap junction protein, alpha 5, 40kDa (connexin 40) protein, complete sequence Length = 114412 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 1 agagcaaaaagaaaaacaaca 21 ||||||||||||||||||||| Sbjct: 100267 agagcaaaaagaaaaacaaca 100287
>gb|AC134585.6| Mus musculus BAC clone RP23-302F9 from 8, complete sequence Length = 249251 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 452 gacggtgatggccctctggtc 472 ||||||||||||||||||||| Sbjct: 208833 gacggtgatggccctctggtc 208813
>ref|NM_193052.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1491 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 739 ttctgcctctcgccggactt 758
>ref|NM_193043.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1374 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 1204 ttctgcctctcgccggactt 1223
>gb|AC118201.8| Mus musculus chromosome 7, clone RP23-339M11, complete sequence Length = 194241 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagctctcaacaatggaaa 114 |||||||||||||||||||| Sbjct: 189390 caagctctcaacaatggaaa 189371
>ref|XM_425961.1| PREDICTED: Gallus gallus similar to multiple myeloma transforming gene 2 (LOC428400), mRNA Length = 828 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cctggcggcggaggttggtgacgg 456 ||||||||||||||| |||||||| Sbjct: 109 cctggcggcggaggtgggtgacgg 86
>gb|DQ481666.1| Takifugu rubripes HoxBb gene cluster, complete sequence Length = 130146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 tcctgcagcttctgcctctc 358 |||||||||||||||||||| Sbjct: 108648 tcctgcagcttctgcctctc 108629
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gtcgctccactggtcgccga 312 |||||||||||||||||||| Sbjct: 12244752 gtcgctccactggtcgccga 12244771
>gb|AC164633.2| Mus musculus chromosome 15, clone RP24-374C19, complete sequence Length = 157653 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aagaaaaacaacataacaaa 28 |||||||||||||||||||| Sbjct: 31621 aagaaaaacaacataacaaa 31602
>gb|AC138131.16| Medicago truncatula clone mth2-21h11, complete sequence Length = 127696 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 aaaaacaacataacaaagat 31 |||||||||||||||||||| Sbjct: 119158 aaaaacaacataacaaagat 119139
>gb|AC118590.11| Mus musculus chromosome 15, clone RP24-506N7, complete sequence Length = 155519 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 9 aagaaaaacaacataacaaa 28 |||||||||||||||||||| Sbjct: 47510 aagaaaaacaacataacaaa 47529
>emb|Z98755.1|HS76C18 Human DNA sequence from clone RP1-76C18 on chromosome 6q16.1-21 Contains a ClpX caseinolytic protease X homolog (E. coli) (CLPX) pseudogene, complete sequence Length = 149698 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 gcaaaaagaaaaacaacata 23 |||||||||||||||||||| Sbjct: 7462 gcaaaaagaaaaacaacata 7443
>emb|AL031591.19|HS353E16 Human DNA sequence from clone RP3-353E16 on chromosome 22q11.22-12.3, complete sequence Length = 189765 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caaaaagaaaaacaacataa 24 |||||||||||||||||||| Sbjct: 124310 caaaaagaaaaacaacataa 124329
>gb|AC158213.4| Mus musculus chromosome 7, clone RP24-253H20, complete sequence Length = 175873 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 95 caagctctcaacaatggaaa 114 |||||||||||||||||||| Sbjct: 27587 caagctctcaacaatggaaa 27568
>emb|AL009029.1|HS164C20 Human DNA sequence from clone RP1-164C20 on chromosome 6q16.1-22.1, complete sequence Length = 161475 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 gcaaaaagaaaaacaacata 23 |||||||||||||||||||| Sbjct: 4685 gcaaaaagaaaaacaacata 4704
>gb|AC090525.8| Homo sapiens 12 BAC RP11-73B8 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 174576 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 97 agctctcaacaatggaaatg 116 |||||||||||||||||||| Sbjct: 45528 agctctcaacaatggaaatg 45547
>emb|AL713917.6| Mouse DNA sequence from clone RP23-352L3 on chromosome 11 Contains the 5' end of the gene for the ortholog of human yippee-like 2 (Drosophila) YPEL2, four novel genes and the 5' end of the Trim37 gene for tripartite motif protein 37, complete sequence Length = 168363 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 5 caaaaagaaaaacaacataacaaa 28 ||||||||||||||||| |||||| Sbjct: 25366 caaaaagaaaaacaacaaaacaaa 25389
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 6.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 249 tcgggcagcttgaaggtgcgggcaccct 276 |||||||||||||||| |||||| |||| Sbjct: 1551158 tcgggcagcttgaaggcgcgggcgccct 1551185
>dbj|AP008232.1| Sodalis glossinidius str. 'morsitans' DNA, complete genome Length = 4171146 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 aggttggtgacggtgatggc 463 |||||||||||||||||||| Sbjct: 1566505 aggttggtgacggtgatggc 1566486
>gb|AC093521.3| Homo sapiens chromosome 5 clone RP11-152P24, complete sequence Length = 143970 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaaaagaaaaacaacataacaaag 29 |||||||||||||||||| ||||| Sbjct: 87412 aaaaagaaaaacaacatatcaaag 87435
>gb|AC011360.4| Homo sapiens chromosome 5 clone CTC-379A17, complete sequence Length = 72566 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 5 caaaaagaaaaacaacataa 24 |||||||||||||||||||| Sbjct: 30196 caaaaagaaaaacaacataa 30177
>emb|BX950605.2| Gallus gallus finished cDNA, clone ChEST529k5 Length = 536 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cctggcggcggaggttggtgacgg 456 ||||||||||||||| |||||||| Sbjct: 195 cctggcggcggaggtgggtgacgg 172
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 aaaaagaaaaacaacataac 25 |||||||||||||||||||| Sbjct: 1541721 aaaaagaaaaacaacataac 1541740
>gb|AC010581.3|AC010581 Drosophila melanogaster, chromosome 3R, region 85D-85D, BAC clone BACR19J06, complete sequence Length = 175053 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaaaagaaaaacaacataacaaag 29 |||||||||||||||| ||||||| Sbjct: 86957 aaaaagaaaaacaacaaaacaaag 86980
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taattcatagtagcaattaa 91 |||||||||||||||||||| Sbjct: 22025728 taattcatagtagcaattaa 22025709
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gtcgctccactggtcgccga 312 |||||||||||||||||||| Sbjct: 12241515 gtcgctccactggtcgccga 12241534
>gb|AC093589.3| Homo sapiens BAC clone RP11-5K10 from 4, complete sequence Length = 127763 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 agcaaaaagaaaaacaacat 22 |||||||||||||||||||| Sbjct: 21403 agcaaaaagaaaaacaacat 21422
>emb|BX934717.1| Gallus gallus finished cDNA, clone ChEST114j14 Length = 532 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 cctggcggcggaggttggtgacgg 456 ||||||||||||||| |||||||| Sbjct: 191 cctggcggcggaggtgggtgacgg 168
>gb|AF106846.1|AF106846 Oryza sativa QM protein gene, complete cds Length = 2310 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 293 gtcgctccactggtcgccga 312 |||||||||||||||||||| Sbjct: 94 gtcgctccactggtcgccga 75
>ref|XM_231590.3| PREDICTED: Rattus norvegicus plexin A4 (predicted) (Plxna4_predicted), mRNA Length = 7451 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 cggccgagccagaggcggcc 227 |||||||||||||||||||| Sbjct: 42 cggccgagccagaggcggcc 61
>gb|AC137699.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0029K10, from chromosome 3, complete sequence Length = 135940 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 gtcgctccactggtcgccga 312 |||||||||||||||||||| Sbjct: 14285 gtcgctccactggtcgccga 14304
>dbj|AP004306.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0506F02 Length = 151612 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 50361 ttctgcctctcgccggactt 50342 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 15084 ttctgcctctcgccggactt 15103
>dbj|AP004260.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0011H09 Length = 147992 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 6911 ttctgcctctcgccggactt 6892
>emb|BX004996.8| Zebrafish DNA sequence from clone CH211-268F23 in linkage group 6, complete sequence Length = 167320 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 8 aaagaaaaacaacataacaa 27 |||||||||||||||||||| Sbjct: 105221 aaagaaaaacaacataacaa 105202
>emb|CR545466.9| Zebrafish DNA sequence from clone DKEYP-115A10 in linkage group 20, complete sequence Length = 84525 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 attaagcagcatgcaacatc 57 |||||||||||||||||||| Sbjct: 6109 attaagcagcatgcaacatc 6090
>dbj|AP004009.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1339_F05 Length = 132708 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 ttctgcctctcgccggactt 367 |||||||||||||||||||| Sbjct: 108520 ttctgcctctcgccggactt 108539
>gb|AE003682.4| Drosophila melanogaster chromosome 3R, section 20 of 118 of the complete sequence Length = 224614 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 aaaaagaaaaacaacataacaaag 29 |||||||||||||||| ||||||| Sbjct: 213455 aaaaagaaaaacaacaaaacaaag 213478
>emb|AL805963.23| Mouse DNA sequence from clone RP23-98K7 on chromosome X, complete sequence Length = 233546 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 caaaaagaaaaacaacataa 24 |||||||||||||||||||| Sbjct: 136382 caaaaagaaaaacaacataa 136401
>gb|AC174770.1| Gasterosteus aculeatus clone VMRC28-84C03, complete sequence Length = 124367 Score = 40.1 bits (20), Expect = 6.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 334 cggcgtcctgcagcttctgcctct 357 ||||||||||||||| |||||||| Sbjct: 10487 cggcgtcctgcagctgctgcctct 10464
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taattcatagtagcaattaa 91 |||||||||||||||||||| Sbjct: 21954073 taattcatagtagcaattaa 21954054
>emb|AL831807.7|CNS08CAK Oryza sativa chromosome 12, . BAC OSJNBa0062E22 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 138308 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 taattcatagtagcaattaa 91 |||||||||||||||||||| Sbjct: 131856 taattcatagtagcaattaa 131837
>gb|AC004473.1|T13D8 Arabidopsis thaliana chromosome 1 BAC T13D8, complete sequence Length = 116177 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aagaaaaacaacataacaaa 28 |||||||||||||||||||| Sbjct: 50149 aagaaaaacaacataacaaa 50130
>emb|AL163613.2|CNS01RIJ Human chromosome 14 DNA sequence BAC R-25I19 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 150312 Score = 40.1 bits (20), Expect = 6.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 aagaaaaacaacataacaaa 28 |||||||||||||||||||| Sbjct: 27673 aagaaaaacaacataacaaa 27654 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,961,865 Number of Sequences: 3902068 Number of extensions: 4961865 Number of successful extensions: 107342 Number of sequences better than 10.0: 89 Number of HSP's better than 10.0 without gapping: 90 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106699 Number of HSP's gapped (non-prelim): 631 length of query: 478 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 456 effective length of database: 17,147,199,772 effective search space: 7819123096032 effective search space used: 7819123096032 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
