Clone Information

BLAST Search Result

Clone Name	rbart49d04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CRTC_RICCO (P93508) Calreticulin precursor	73	5e-13
2	CRTC2_ARATH (Q38858) Calreticulin-2 precursor	72	9e-13
3	CRTC_BETVU (O81919) Calreticulin precursor	72	9e-13
4	CRTC_BERST (Q9ZPP1) Calreticulin precursor	72	9e-13
5	CRTC3_ARATH (O04153) Calreticulin-3 precursor	71	2e-12
6	CRTC_NICPL (Q40401) Calreticulin precursor	70	4e-12
7	CRTC1_ARATH (O04151) Calreticulin-1 precursor	68	2e-11
8	CRTC_PRUAR (Q9XF98) Calreticulin precursor	68	2e-11
9	CRTC_ORYSA (Q9SLY8) Calreticulin precursor	62	1e-09
10	CRTC_MAIZE (Q9SP22) Calreticulin precursor	60	3e-09
11	CRTC_CHLRE (Q9STD3) Calreticulin precursor	57	3e-08
12	CRTC3_MOUSE (Q9D9Q6) Calreticulin-3 precursor (Calreticulin-2)	52	8e-07
13	CRTC3_HUMAN (Q96L12) Calreticulin-3 precursor (Calreticulin-2)	51	2e-06
14	CRTC_HUMAN (P27797) Calreticulin precursor (CRP55) (Calregulin) ...	51	2e-06
15	CRTC_CRIGR (Q8K3H7) Calreticulin precursor (CRP55) (Calregulin) ...	51	2e-06
16	CRTC1_BOVIN (P52193) Calreticulin, brain isoform 1 precursor (CR...	51	2e-06
17	CRTC_RABIT (P15253) Calreticulin precursor (CRP55) (Calregulin) ...	51	2e-06
18	CRTC_SCHMA (Q06814) Calreticulin precursor (SM4 protein)	51	2e-06
19	CRTC2_BOVIN (P42918) Calreticulin, brain isoform 2 precursor (CR...	51	2e-06
20	CRTC_RAT (P18418) Calreticulin precursor (CRP55) (Calregulin) (H...	51	2e-06
21	CRTC_MOUSE (P14211) Calreticulin precursor (CRP55) (Calregulin) ...	51	2e-06
22	CRTC_DICDI (Q23858) Calreticulin precursor	45	1e-04
23	CRTC_DROME (P29413) Calreticulin precursor (CRP55) (Calregulin) ...	43	5e-04
24	CRTC_EUGGR (Q9ZNY3) Calreticulin precursor	42	8e-04
25	CRTC_CAEEL (P27798) Calreticulin precursor	42	0.001
26	RAL1_ONCVO (P11012) RAL-1 protein precursor (RAL1 antigen) (41 k...	40	0.003
27	CALX_SOYBN (Q39817) Calnexin homolog precursor	40	0.004
28	CALX_PEA (O82709) Calnexin homolog precursor	39	0.007
29	CALX2_ARATH (Q38798) Calnexin homolog 2 precursor	39	0.011
30	CALX1_ARATH (P29402) Calnexin homolog 1 precursor	39	0.011
31	CLGN_MOUSE (P52194) Calmegin precursor (MEG 1 antigen) (Calnexin...	35	0.13
32	CALX_PONPY (Q5R440) Calnexin precursor	35	0.17
33	CALX_HUMAN (P27824) Calnexin precursor (Major histocompatibility...	35	0.17
34	CALX_CANFA (P24643) Calnexin precursor (pp90)	35	0.17
35	CLGN_HUMAN (O14967) Calmegin precursor	33	0.37
36	CALX_CAEEL (P34652) Calnexin homolog precursor	33	0.48
37	CALX_RAT (P35565) Calnexin precursor	31	1.8
38	CALX_MOUSE (P35564) Calnexin precursor	31	1.8
39	MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd	31	2.4
40	MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich p...	30	4.1
41	MS87F_DROME (P08175) Male-specific sperm protein Mst87F	30	5.3
42	FTR_RHOBA (Q7UKZ8) Formylmethanofuran--tetrahydromethanopterin f...	29	7.0

>CRTC_RICCO (P93508) Calreticulin precursor|
          Length = 415

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 28/38 (73%), Positives = 37/38 (97%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWGAN 413
           Y+GIE+WQVK+G++FDN+LIC+DPEYAKQ+A+ETWG N
Sbjct: 315 YVGIELWQVKSGTLFDNVLICNDPEYAKQLAEETWGKN 352

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>CRTC2_ARATH (Q38858) Calreticulin-2 precursor|
          Length = 424

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 27/36 (75%), Positives = 36/36 (100%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           Y+G+E+WQVK+GS+FDN+LICDDP+YAK++ADETWG
Sbjct: 317 YVGLELWQVKSGSLFDNVLICDDPDYAKKLADETWG 352

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>CRTC_BETVU (O81919) Calreticulin precursor|
          Length = 416

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 26/36 (72%), Positives = 36/36 (100%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           Y+G+E+WQVK+G++FDN+L+CDDPEYAKQ+A+ETWG
Sbjct: 320 YVGVELWQVKSGTLFDNVLVCDDPEYAKQLAEETWG 355

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>CRTC_BERST (Q9ZPP1) Calreticulin precursor|
          Length = 416

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 27/38 (71%), Positives = 37/38 (97%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWGAN 413
           Y+GIE+WQVK+G++FDN+LICDDP+YAK++A+ETWG N
Sbjct: 317 YVGIELWQVKSGTMFDNVLICDDPDYAKKLAEETWGKN 354

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>CRTC3_ARATH (O04153) Calreticulin-3 precursor|
          Length = 424

 Score = 70.9 bits (172), Expect = 2e-12
 Identities = 40/105 (38%), Positives = 50/105 (47%), Gaps = 1/105 (0%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWGANXXXXXXXXXXXXXXXXXXXXXX 347
           Y GIEVWQVKAGS+FDNILICDDP YA+ + D+ +  +                      
Sbjct: 323 YAGIEVWQVKAGSIFDNILICDDPAYARSIVDDYFAQH---RESEKELFAEAEKERKARE 379

Query: 346 AQQAXXXXXXXXXXXXXXXXXXXHYKDRYKRRN-RDHWDDYHDEL 215
            ++A                     + RYKR N RD+ DDYHDEL
Sbjct: 380 DEEARIAREEGERRRKERDHRYGDRRRRYKRPNPRDYMDDYHDEL 424

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>CRTC_NICPL (Q40401) Calreticulin precursor|
          Length = 416

 Score = 70.1 bits (170), Expect = 4e-12
 Identities = 26/36 (72%), Positives = 35/36 (97%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           Y+G+E+WQVK+G++FDNI+ICDDPEYAK +A+ETWG
Sbjct: 322 YVGVELWQVKSGTLFDNIVICDDPEYAKAIAEETWG 357

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>CRTC1_ARATH (O04151) Calreticulin-1 precursor|
          Length = 425

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 25/36 (69%), Positives = 35/36 (97%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           Y+G+E+WQVK+GS+FDN+L+ DDPEYAK++A+ETWG
Sbjct: 317 YVGVELWQVKSGSLFDNVLVSDDPEYAKKLAEETWG 352

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>CRTC_PRUAR (Q9XF98) Calreticulin precursor|
          Length = 421

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 27/36 (75%), Positives = 35/36 (97%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           Y+GIE+WQVK+G++FDNILI D+PEYAKQ+A+ETWG
Sbjct: 319 YVGIELWQVKSGTLFDNILITDEPEYAKQLAEETWG 354

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>CRTC_ORYSA (Q9SLY8) Calreticulin precursor|
          Length = 424

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 26/36 (72%), Positives = 31/36 (86%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           YIGIE+WQVK+G++FDN LI DDPE AK  A+ETWG
Sbjct: 324 YIGIELWQVKSGTLFDNFLITDDPELAKTFAEETWG 359

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>CRTC_MAIZE (Q9SP22) Calreticulin precursor|
          Length = 420

 Score = 60.5 bits (145), Expect = 3e-09
 Identities = 25/36 (69%), Positives = 31/36 (86%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           YIGIE+WQVK+G++FDNI+I DDP  AK  A+ETWG
Sbjct: 320 YIGIELWQVKSGTLFDNIIITDDPALAKTFAEETWG 355

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>CRTC_CHLRE (Q9STD3) Calreticulin precursor|
          Length = 420

 Score = 57.0 bits (136), Expect = 3e-08
 Identities = 22/36 (61%), Positives = 31/36 (86%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           ++G E+WQVK+GS+FDNIL+ DD E AK+ A++TWG
Sbjct: 317 FVGFELWQVKSGSIFDNILVTDDLEAAKKFAEDTWG 352

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>CRTC3_MOUSE (Q9D9Q6) Calreticulin-3 precursor (Calreticulin-2)|
          Length = 380

 Score = 52.4 bits (124), Expect = 8e-07
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+WQV++G++FDN LI DD EYA++    TWG
Sbjct: 297 IGLELWQVRSGTIFDNFLITDDEEYAEKFGKATWG 331

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>CRTC3_HUMAN (Q96L12) Calreticulin-3 precursor (Calreticulin-2)|
          Length = 384

 Score = 51.2 bits (121), Expect = 2e-06
 Identities = 20/35 (57%), Positives = 26/35 (74%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+WQV++G++FDN LI DD EYA      TWG
Sbjct: 300 IGLELWQVRSGTIFDNFLITDDEEYADNFGKATWG 334

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>CRTC_HUMAN (P27797) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
           (ERp60) (grp60)
          Length = 417

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC_CRIGR (Q8K3H7) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
           (ERp60)
          Length = 417

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC1_BOVIN (P52193) Calreticulin, brain isoform 1 precursor (CRP55)|
           (Calregulin) (HACBP)
          Length = 417

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC_RABIT (P15253) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
           (ERp60)
          Length = 418

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC_SCHMA (Q06814) Calreticulin precursor (SM4 protein)|
          Length = 393

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 27/35 (77%)
 Frame = -3

Query: 526 YIGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           Y+G ++WQV +GS+FDNILI D P++AK+  +  W
Sbjct: 311 YVGFDLWQVDSGSIFDNILITDSPDFAKEEGERLW 345

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>CRTC2_BOVIN (P42918) Calreticulin, brain isoform 2 precursor (CRP55)|
           (Calregulin) (HACBP)
          Length = 421

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 318 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 352

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>CRTC_RAT (P18418) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
           (ERp60) (CALBP) (Calcium-binding protein 3) (CABP3)
          Length = 416

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC_MOUSE (P14211) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
           (ERp60)
          Length = 416

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 18/35 (51%), Positives = 29/35 (82%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           +G+++WQVK+G++FDN LI +D  YA++  +ETWG
Sbjct: 314 LGLDLWQVKSGTIFDNFLITNDEAYAEEFGNETWG 348

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>CRTC_DICDI (Q23858) Calreticulin precursor|
          Length = 424

 Score = 45.1 bits (105), Expect = 1e-04
 Identities = 18/37 (48%), Positives = 29/37 (78%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWGAN 413
           IG E+WQVK+GS+F+N+++ D  E AK  +++T+ AN
Sbjct: 315 IGFELWQVKSGSIFNNMIVTDSVEEAKDFSEKTFVAN 351

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>CRTC_DROME (P29413) Calreticulin precursor (CRP55) (Calregulin) (HACBP)|
          Length = 406

 Score = 43.1 bits (100), Expect = 5e-04
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADE 428
           +G ++WQVK+G++FDN+LI DD E A + A E
Sbjct: 314 LGFDLWQVKSGTIFDNVLITDDVELAAKAAAE 345

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>CRTC_EUGGR (Q9ZNY3) Calreticulin precursor|
          Length = 401

 Score = 42.4 bits (98), Expect = 8e-04
 Identities = 17/36 (47%), Positives = 26/36 (72%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWGA 416
           +G ++WQVK+G++FDNI++ D    AK   D+T GA
Sbjct: 311 VGFDLWQVKSGTIFDNIIVTDSLAEAKAFYDQTNGA 346

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>CRTC_CAEEL (P27798) Calreticulin precursor|
          Length = 395

 Score = 42.0 bits (97), Expect = 0.001
 Identities = 18/34 (52%), Positives = 26/34 (76%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           IG ++WQVK+G++FDNI+I D  E A+  A ET+
Sbjct: 309 IGFDLWQVKSGTIFDNIIITDSVEEAEAHAAETF 342

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>RAL1_ONCVO (P11012) RAL-1 protein precursor (RAL1 antigen) (41 kDa larval|
           antigen)
          Length = 388

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 14/33 (42%), Positives = 26/33 (78%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADET 425
           IG ++WQVK+G++FD++++ D  E AK+  ++T
Sbjct: 312 IGFDLWQVKSGTIFDDVIVTDSVEEAKKFGEKT 344

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>CALX_SOYBN (Q39817) Calnexin homolog precursor|
          Length = 546

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           IGIE+W ++ G +FDN+LI +D + A+   + TW
Sbjct: 377 IGIEIWTMQDGILFDNVLIANDDKVAESYRETTW 410

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>CALX_PEA (O82709) Calnexin homolog precursor|
          Length = 551

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 15/34 (44%), Positives = 23/34 (67%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           IGIE+W ++ G +FDN+LI  D + A+   + TW
Sbjct: 376 IGIEIWTMQDGILFDNVLIAKDDKIAESYRETTW 409

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>CALX2_ARATH (Q38798) Calnexin homolog 2 precursor|
          Length = 532

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           IGIE+W ++ G +FDNILI  D + A+     TW
Sbjct: 370 IGIEIWTMQDGILFDNILISKDEKVAETYRQSTW 403

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>CALX1_ARATH (P29402) Calnexin homolog 1 precursor|
          Length = 530

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           IGIE+W ++ G +FDNILI  D + A+     TW
Sbjct: 368 IGIEIWTMQDGILFDNILIAKDEKVAETYRQTTW 401

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>CLGN_MOUSE (P52194) Calmegin precursor (MEG 1 antigen) (Calnexin-T) (A2/6)|
          Length = 611

 Score = 35.0 bits (79), Expect = 0.13
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           +G+E+W +     FDN +IC + E A Q A + W
Sbjct: 411 LGLELWSMTPDIYFDNFIICSEKEVADQWATDGW 444

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>CALX_PONPY (Q5R440) Calnexin precursor|
          Length = 592

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+W + +   FDN +IC D       A++ WG
Sbjct: 422 IGLELWSMTSDIFFDNFIICADRRIVDDWANDGWG 456

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>CALX_HUMAN (P27824) Calnexin precursor (Major histocompatibility complex class|
           I antigen-binding protein p88) (p90) (IP90)
          Length = 592

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+W + +   FDN +IC D       A++ WG
Sbjct: 422 IGLELWSMTSDIFFDNFIICADRRIVDDWANDGWG 456

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>CALX_CANFA (P24643) Calnexin precursor (pp90)|
          Length = 593

 Score = 34.7 bits (78), Expect = 0.17
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+W + +   FDN ++C D       A++ WG
Sbjct: 423 IGLELWSMTSDIFFDNFIVCGDRRVVDDWANDGWG 457

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>CLGN_HUMAN (O14967) Calmegin precursor|
          Length = 610

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           +G+E+W + +   FDN +IC + E A   A + W
Sbjct: 411 LGLELWSMTSDIYFDNFIICSEKEVADHWAADGW 444

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>CALX_CAEEL (P34652) Calnexin homolog precursor|
          Length = 619

 Score = 33.1 bits (74), Expect = 0.48
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETW 422
           +GIE+W +    +FDNILI    E +  VA +T+
Sbjct: 414 VGIEMWTMSENILFDNILITSSEEDSSDVAKQTF 447

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>CALX_RAT (P35565) Calnexin precursor|
          Length = 591

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+W + +   FDN +I  D       A++ WG
Sbjct: 423 IGLELWSMTSDIFFDNFIISGDRRVVDDWANDGWG 457

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>CALX_MOUSE (P35564) Calnexin precursor|
          Length = 591

 Score = 31.2 bits (69), Expect = 1.8
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 523 IGIEVWQVKAGSVFDNILICDDPEYAKQVADETWG 419
           IG+E+W + +   FDN +I  D       A++ WG
Sbjct: 423 IGLELWSMTSDIFFDNFIISGDRRVVDDWANDGWG 457

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>MS84D_DROME (Q01645) Male-specific sperm protein Mst84Dd|
          Length = 72

 Score = 30.8 bits (68), Expect = 2.4
 Identities = 11/19 (57%), Positives = 11/19 (57%)
 Frame = +1

Query: 235 PSDPCCVFCICPCSGPCHG 291
           P  PCC  C  PC GPC G
Sbjct: 12  PCGPCCGPCCGPCCGPCCG 30



 Score = 28.9 bits (63), Expect = 9.1
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +1

Query: 244 PCCVFCICPCSGPCHG 291
           PCC  C  PC GPC G
Sbjct: 19  PCCGPCCGPCCGPCCG 34

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>MCSP_RAT (Q64298) Sperm mitochondrial-associated cysteine-rich protein|
          Length = 145

 Score = 30.0 bits (66), Expect = 4.1
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 235 PSDPCCVFCICPCSGPC 285
           P  PCC   +CPC  PC
Sbjct: 43  PKSPCCTPKVCPCPTPC 59

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>MS87F_DROME (P08175) Male-specific sperm protein Mst87F|
          Length = 56

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +1

Query: 235 PSDPCCVFCICPCSGPC 285
           P  PCC  C  PC GPC
Sbjct: 5   PCGPCCGPCCGPCCGPC 21

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>FTR_RHOBA (Q7UKZ8) Formylmethanofuran--tetrahydromethanopterin|
           formyltransferase (EC 2.3.1.101) (H4MPT
           formyltransferase)
          Length = 334

 Score = 29.3 bits (64), Expect = 7.0
 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = +2

Query: 59  ALLSHRNDLRGQFNQFPSHETRNTSIIGSNYNAMFMS-NPSF 181
           A +    +L G    FP   TR+ S +GS Y A+F S N SF
Sbjct: 205 AAIDAMRELPGIITPFPGGTTRSGSKVGSKYAALFASTNDSF 246


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,767,626
Number of Sequences: 219361
Number of extensions: 890170
Number of successful extensions: 2265
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 2199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2261
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4027872870
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result