>SDC3_CAEEL (P34706) Zinc finger protein sdc-3|
          Length = 2150

 Score = 31.2 bits (69), Expect = 0.71
 Identities = 19/72 (26%), Positives = 32/72 (44%)
 Frame = +3

Query: 45  NTIFSLRVQYISRTTPPSPLIKFRKQKVLLKTRNHQMLHASQRWEGKIIQLIKGSGW*GT 224
           + + S  V+Y  R  P    ++ + +K++LK    ++      W GK  +         T
Sbjct: 721 DALMSKDVKYKPRMIPEKGFLQLQDEKLILK----RLCEKEDEWSGKQKRRFPDLYEQAT 776

Query: 225 KSTPRTGDPDAS 260
           +   R GDPDAS
Sbjct: 777 QEAERLGDPDAS 788

>SMS2_CAEEL (Q20735) Putative phosphatidylcholine:ceramide|
           cholinephosphotransferase 2 (EC 2.7.-.-) (Sphingomyelin
           synthase 2)
          Length = 335

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/21 (57%), Positives = 14/21 (66%)
 Frame = -2

Query: 229 DFVPYQPLPLINCIIFPSQRW 167
           D VP QPLP +  +I P QRW
Sbjct: 82  DVVPRQPLPDLTFMIIPQQRW 102

>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +3

Query: 18  HPYTRPRHCNTIFSLRVQYISRTTPPSP 101
           HP+  P H + +F LR    S T PPSP
Sbjct: 227 HPHPHP-HPSAVFHLRAPSSSSTAPPSP 253

>RUMB_VIBCH (Q9KL20) 23S rRNA (uracil-5-)-methyltransferase rumB (EC 2.1.1.-)|
           (23S rRNA(M-5-U747)-methyltransferase)
          Length = 375

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = -2

Query: 256 ASGSPVRGVDFVPYQPLPLINCIIFPS--QRWLA*SI*WFRV 137
           A+ +P+ G++    QPL L+ C ++P   Q  LA    W R+
Sbjct: 66  AAHAPILGIEDAQGQPLSLVTCPLYPQPMQELLAYLENWIRI 107

>DSBD1_PSEAE (Q9HUW5) Thiol:disulfide interchange protein dsbD 1 precursor (EC|
           1.8.1.8) (Protein-disulfide reductase 1) (Disulfide
           reductase 1)
          Length = 591

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 2/23 (8%)
 Frame = +1

Query: 220 ERNPLH--ARGIPMLHAGPDRTP 282
           E +P+H   R +P +HAGP  TP
Sbjct: 447 ESDPIHPLGRSVPSIHAGPPSTP 469


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,699,892
Number of Sequences: 219361
Number of extensions: 829148
Number of successful extensions: 1636
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1636
length of database: 80,573,946
effective HSP length: 72
effective length of database: 64,779,954
effective search space used: 1554718896
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)