ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart49c08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter p... 30 1.5
2PIT_BUCAI (P57647) Low-affinity inorganic phosphate transporter 27 10.0

>BLNK_HUMAN (Q8WV28) B-cell linker protein (Cytoplasmic adapter protein)|
           (B-cell adapter containing SH2 domain protein) (B-cell
           adapter containing Src homology 2 domain protein) (Src
           homology 2 domain-containing leukocyte protein of 65
           kDa) (SLP-65)
          Length = 456

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 138 GSNNGARRTINPAP*KPSRTREA*HKIITEIKSSRTAGEVNRLSSAQQTP 287
           G N+GA  T +P P  PS    A  K  T +K++  A + N  S  ++ P
Sbjct: 226 GRNSGAWETKSPPPAAPSPLPRAGKKPTTPLKTTPVASQQNASSVCEEKP 275



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>PIT_BUCAI (P57647) Low-affinity inorganic phosphate transporter|
          Length = 490

 Score = 27.3 bits (59), Expect = 10.0
 Identities = 19/43 (44%), Positives = 26/43 (60%)
 Frame = -3

Query: 229 ISVIILCYASLVRDGF*GAGLIVLLAPLLDPSSIFMYVLNTSK 101
           +S I + YA    DG  G GLI+L+   + PSS F+  LNT+K
Sbjct: 216 LSSIGVSYAHGANDGQKGIGLIMLVLIGIVPSS-FLVNLNTNK 257


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,458,834
Number of Sequences: 219361
Number of extensions: 711209
Number of successful extensions: 1216
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1215
length of database: 80,573,946
effective HSP length: 79
effective length of database: 63,244,427
effective search space used: 1517866248
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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